RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 OPHN1O60890 802 aa6.79□□□□□ -1.32
PTPN4-204ENST00000431283 KANSL1Q7Z3B3 1105 aa6.79□□□□□ -1.32
PTPN4-204ENST00000431283 ELOA2Q8IYF1 753 aaPredicted RBP6.79□□□□□ -1.32
PTPN4-204ENST00000431283 EFHBQ8N7U6 833 aa6.79□□□□□ -1.32
PTPN4-204ENST00000431283 ZNF512Q96ME7 567 aaPredicted RBP6.79□□□□□ -1.32
PTPN4-204ENST00000431283 OSBPL6Q9BZF3 934 aa6.79□□□□□ -1.32
PTPN4-204ENST00000431283 KANSL2Q9H9L4 492 aa6.79□□□□□ -1.32
PTPN4-204ENST00000431283 PCDH8O95206 1070 aa6.78□□□□□ -1.32
PTPN4-204ENST00000431283 ATP2A2P16615 1042 aaKnown RBP6.78□□□□□ -1.32
PTPN4-204ENST00000431283 XPAP23025 273 aaPredicted RBP6.78□□□□□ -1.32
PTPN4-204ENST00000431283 PTGS2P35354 604 aa6.78□□□□□ -1.32
PTPN4-204ENST00000431283 KPNA1P52294 538 aaPredicted RBP6.78□□□□□ -1.32
PTPN4-204ENST00000431283 ADAM8P78325 824 aa6.78□□□□□ -1.32
PTPN4-204ENST00000431283 SPIDRQ14159 915 aa6.78□□□□□ -1.32
PTPN4-204ENST00000431283 FNDC7Q5VTL7 733 aa6.78□□□□□ -1.32
PTPN4-204ENST00000431283 CNNM4Q6P4Q7 775 aa6.78□□□□□ -1.32
PTPN4-204ENST00000431283 APPBP2Q92624 585 aa6.78□□□□□ -1.32
PTPN4-204ENST00000431283 PGBD4Q96DM1 585 aa6.78□□□□□ -1.32
PTPN4-204ENST00000431283 HAPLN2Q9GZV7 340 aa6.78□□□□□ -1.32
PTPN4-204ENST00000431283 IKZF4Q9H2S9 585 aa6.78□□□□□ -1.32
PTPN4-204ENST00000431283 THG1LQ9NWX6 298 aaKnown RBP6.78□□□□□ -1.32
PTPN4-204ENST00000431283 F2P00734 622 aa6.77□□□□□ -1.33
PTPN4-204ENST00000431283 INHBEP58166 350 aa6.77□□□□□ -1.33
PTPN4-204ENST00000431283 OCRLQ01968 901 aa6.77□□□□□ -1.33
PTPN4-204ENST00000431283 ESPNLQ6ZVH7 1005 aa6.77□□□□□ -1.33
PTPN4-204ENST00000431283 MRGPRGQ86SM5 289 aa6.77□□□□□ -1.33
PTPN4-204ENST00000431283 SYNE4Q8N205 404 aa6.77□□□□□ -1.33
PTPN4-204ENST00000431283 ST8SIA2Q92186 375 aa6.77□□□□□ -1.33
PTPN4-204ENST00000431283 LARP4BQ92615 738 aaKnown RBP6.77□□□□□ -1.33
PTPN4-204ENST00000431283 FAM193BQ96PV7 902 aaPredicted RBP6.77□□□□□ -1.33
PTPN4-204ENST00000431283 PRRX2Q99811 253 aa6.77□□□□□ -1.33
PTPN4-204ENST00000431283 ORAI3Q9BRQ5 295 aa6.77□□□□□ -1.33
PTPN4-204ENST00000431283 NRDE2Q9H7Z3 1164 aa6.77□□□□□ -1.33
PTPN4-204ENST00000431283 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.77□□□□□ -1.33
PTPN4-204ENST00000431283 H2AFY2Q9P0M6 372 aaPredicted RBP6.77□□□□□ -1.33
PTPN4-204ENST00000431283 USP36Q9P275 1121 aaKnown RBP6.77□□□□□ -1.33
PTPN4-204ENST00000431283 PCDHB6Q9Y5E3 794 aa6.77□□□□□ -1.33
PTPN4-204ENST00000431283 CD2APQ9Y5K6 639 aa6.77□□□□□ -1.33
PTPN4-204ENST00000431283 MTSS1O43312 755 aa6.76□□□□□ -1.33
PTPN4-204ENST00000431283 RPS6KA4O75676 772 aa6.76□□□□□ -1.33
PTPN4-204ENST00000431283 SCNN1BP51168 640 aa6.76□□□□□ -1.33
PTPN4-204ENST00000431283 LRRC32Q14392 662 aa6.76□□□□□ -1.33
PTPN4-204ENST00000431283 SMN1Q16637 294 aaKnown RBP6.76□□□□□ -1.33
PTPN4-204ENST00000431283 C21orf62-AS1Q17RA5 79 aa6.76□□□□□ -1.33
PTPN4-204ENST00000431283 C16orf86Q6ZW13 317 aa6.76□□□□□ -1.33
PTPN4-204ENST00000431283 C11orf74Q86VG3 221 aa6.76□□□□□ -1.33
PTPN4-204ENST00000431283 LRRTM3Q86VH5 581 aa6.76□□□□□ -1.33
PTPN4-204ENST00000431283 NXPE1Q8N323 547 aa6.76□□□□□ -1.33
PTPN4-204ENST00000431283 CDYL2Q8N8U2 506 aa6.76□□□□□ -1.33
PTPN4-204ENST00000431283 CHTF18Q8WVB6 975 aa6.76□□□□□ -1.33
PTPN4-204ENST00000431283 MNTQ99583 582 aa6.76□□□□□ -1.33
PTPN4-204ENST00000431283 ZMAT4Q9H898 229 aa6.76□□□□□ -1.33
PTPN4-204ENST00000431283 MYPNQ86TC9 1320 aa6.76□□□□□ -1.33
PTPN4-204ENST00000431283 TMEM191CA6NGB0 347 aa6.75□□□□□ -1.33
PTPN4-204ENST00000431283 NRP2O60462 931 aa6.75□□□□□ -1.33
PTPN4-204ENST00000431283 RAMP2O60895 175 aa6.75□□□□□ -1.33
PTPN4-204ENST00000431283 FAM20BO75063 409 aa6.75□□□□□ -1.33
PTPN4-204ENST00000431283 TOB2Q14106 344 aaPredicted RBP6.75□□□□□ -1.33
PTPN4-204ENST00000431283 CREB3L3Q68CJ9 461 aa6.75□□□□□ -1.33
PTPN4-204ENST00000431283 UNQ6494/PRO21346Q6UXR6 183 aa6.75□□□□□ -1.33
PTPN4-204ENST00000431283 APBB1IPQ7Z5R6 666 aaPredicted RBP6.75□□□□□ -1.33
PTPN4-204ENST00000431283 AHI1Q8N157 1196 aa6.75□□□□□ -1.33
PTPN4-204ENST00000431283 PPM1KQ8N3J5 372 aa6.75□□□□□ -1.33
PTPN4-204ENST00000431283 MDGA1Q8NFP4 955 aa6.75□□□□□ -1.33
PTPN4-204ENST00000431283 SLC25A43Q8WUT9 341 aaPredicted RBP6.75□□□□□ -1.33
PTPN4-204ENST00000431283 HAS1Q92839 578 aa6.75□□□□□ -1.33
PTPN4-204ENST00000431283 MSRAQ9UJ68 235 aa6.75□□□□□ -1.33
PTPN4-204ENST00000431283 XDHP47989 1333 aa6.75□□□□□ -1.33
PTPN4-204ENST00000431283 BICRAQ9NZM4 1560 aa6.74□□□□□ -1.33
PTPN4-204ENST00000431283 ZNF891A8MT65 544 aaPredicted RBP6.74□□□□□ -1.33
PTPN4-204ENST00000431283 RAB11FIP3O75154 756 aa6.74□□□□□ -1.33
PTPN4-204ENST00000431283 PPFIA2O75334 1257 aa6.74□□□□□ -1.33
PTPN4-204ENST00000431283 PPFIA4O75335 1185 aa6.74□□□□□ -1.33
PTPN4-204ENST00000431283 RECQL4O94761 1208 aa6.74□□□□□ -1.33
PTPN4-204ENST00000431283 ALDH1A2O94788 518 aa6.74□□□□□ -1.33
PTPN4-204ENST00000431283 NRG3P56975 720 aa6.74□□□□□ -1.33
PTPN4-204ENST00000431283 RABL3Q5HYI8 236 aa6.74□□□□□ -1.33
PTPN4-204ENST00000431283 UNC5BQ8IZJ1 945 aa6.74□□□□□ -1.33
PTPN4-204ENST00000431283 ZNF276Q8N554 614 aa6.74□□□□□ -1.33
PTPN4-204ENST00000431283 OR5M3Q8NGP4 307 aa6.74□□□□□ -1.33
PTPN4-204ENST00000431283 NINJ1Q92982 152 aa6.74□□□□□ -1.33
PTPN4-204ENST00000431283 FANCLQ9NW38 375 aa6.74□□□□□ -1.33
PTPN4-204ENST00000431283 KCNG1Q9UIX4 513 aa6.74□□□□□ -1.33
PTPN4-204ENST00000431283 USP18Q9UMW8 372 aa6.74□□□□□ -1.33
PTPN4-204ENST00000431283 HDAC5Q9UQL6 1122 aa6.74□□□□□ -1.33
PTPN4-204ENST00000431283 GAAP10253 952 aa6.73□□□□□ -1.33
PTPN4-204ENST00000431283 RABGGTBP53611 331 aa6.73□□□□□ -1.33
PTPN4-204ENST00000431283 IL2P60568 153 aa6.73□□□□□ -1.33
PTPN4-204ENST00000431283 SLC25A3Q00325 362 aa6.73□□□□□ -1.33
PTPN4-204ENST00000431283 DSG1Q02413 1049 aa6.73□□□□□ -1.33
PTPN4-204ENST00000431283 LMBR1LQ6UX01 489 aa6.73□□□□□ -1.33
PTPN4-204ENST00000431283 NIM1KQ8IY84 436 aa6.73□□□□□ -1.33
PTPN4-204ENST00000431283 OR2W6PQ8NHA6 318 aa6.73□□□□□ -1.33
PTPN4-204ENST00000431283 RNPC3Q96LT9 517 aaKnown RBP6.73□□□□□ -1.33
PTPN4-204ENST00000431283 GPR101Q96P66 508 aaPredicted RBP6.73□□□□□ -1.33
PTPN4-204ENST00000431283 CPPED1Q9BRF8 314 aaPredicted RBP6.73□□□□□ -1.33
PTPN4-204ENST00000431283 ING3Q9NXR8 418 aa6.73□□□□□ -1.33
PTPN4-204ENST00000431283 SHROOM4Q9ULL8 1493 aa6.73□□□□□ -1.33
PTPN4-204ENST00000431283 A0A0A6YYK5 440 aaPredicted RBP6.72□□□□□ -1.33
PTPN4-204ENST00000431283 KLRG2A4D1S0 409 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms