RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 MRPS5P82675 430 aaKnown RBP10.89□□□□□ -0.67
HDAC6-207ENST00000430858 NCBP1Q09161 790 aaKnown RBP10.89□□□□□ -0.67
HDAC6-207ENST00000430858 CAPSQ13938 189 aa10.89□□□□□ -0.67
HDAC6-207ENST00000430858 AAK1Q2M2I8 961 aa10.89□□□□□ -0.67
HDAC6-207ENST00000430858 MAEAQ7L5Y9 396 aa10.89□□□□□ -0.67
HDAC6-207ENST00000430858 LRRC43Q8N309 656 aa10.89□□□□□ -0.67
HDAC6-207ENST00000430858 KCTD17Q8N5Z5 321 aa10.89□□□□□ -0.67
HDAC6-207ENST00000430858 RNF169Q8NCN4 708 aa10.89□□□□□ -0.67
HDAC6-207ENST00000430858 MRPL9Q9BYD2 267 aaKnown RBP10.89□□□□□ -0.67
HDAC6-207ENST00000430858 BHMT2Q9H2M3 363 aa10.89□□□□□ -0.67
HDAC6-207ENST00000430858 GPRC5CQ9NQ84 441 aa10.89□□□□□ -0.67
HDAC6-207ENST00000430858 DDX19AQ9NUU7 478 aaKnown RBP10.89□□□□□ -0.67
HDAC6-207ENST00000430858 RNF19AQ9NV58 838 aa10.89□□□□□ -0.67
HDAC6-207ENST00000430858 PLAGL2Q9UPG8 496 aa10.89□□□□□ -0.67
HDAC6-207ENST00000430858 DNM3Q9UQ16 869 aa10.89□□□□□ -0.67
HDAC6-207ENST00000430858 PCDHB12Q9Y5F1 795 aa10.89□□□□□ -0.67
HDAC6-207ENST00000430858 PRRC2BQ5JSZ5 2229 aaKnown RBP10.89□□□□□ -0.67
HDAC6-207ENST00000430858 COL4A4P53420 1690 aaPredicted RBP10.89□□□□□ -0.67
HDAC6-207ENST00000430858 EYSQ5T1H1 3165 aa10.88□□□□□ -0.67
HDAC6-207ENST00000430858 VWA3AA6NCI4 1184 aa10.88□□□□□ -0.67
HDAC6-207ENST00000430858 PP2D1A8MPX8 630 aa10.88□□□□□ -0.67
HDAC6-207ENST00000430858 TSPAN1O60635 241 aa10.88□□□□□ -0.67
HDAC6-207ENST00000430858 EYA4O95677 639 aa10.88□□□□□ -0.67
HDAC6-207ENST00000430858 ITGB1P05556 798 aa10.88□□□□□ -0.67
HDAC6-207ENST00000430858 SYT1P21579 422 aa10.88□□□□□ -0.67
HDAC6-207ENST00000430858 CDC25AP30304 524 aa10.88□□□□□ -0.67
HDAC6-207ENST00000430858 UBE3AQ05086 875 aa10.88□□□□□ -0.67
HDAC6-207ENST00000430858 MBTD1Q05BQ5 628 aa10.88□□□□□ -0.67
HDAC6-207ENST00000430858 TJAP1Q5JTD0 557 aa10.88□□□□□ -0.67
HDAC6-207ENST00000430858 CLLU1OSQ5K130 101 aa10.88□□□□□ -0.67
HDAC6-207ENST00000430858 NOTUMQ6P988 496 aa10.88□□□□□ -0.67
HDAC6-207ENST00000430858 GLB1LQ6UWU2 654 aa10.88□□□□□ -0.67
HDAC6-207ENST00000430858 KLHL23Q8NBE8 558 aa10.88□□□□□ -0.67
HDAC6-207ENST00000430858 CNNM3Q8NE01 707 aa10.88□□□□□ -0.67
HDAC6-207ENST00000430858 SYMPKQ92797 1274 aaKnown RBP10.88□□□□□ -0.67
HDAC6-207ENST00000430858 HLA-CQ95604 372 aa10.88□□□□□ -0.67
HDAC6-207ENST00000430858 PGBD4Q96DM1 585 aa10.88□□□□□ -0.67
HDAC6-207ENST00000430858 CCDC51Q96ER9 411 aa10.88□□□□□ -0.67
HDAC6-207ENST00000430858 AK8Q96MA6 479 aa10.88□□□□□ -0.67
HDAC6-207ENST00000430858 ASB2Q96Q27 587 aa10.88□□□□□ -0.67
HDAC6-207ENST00000430858 MMTAG2Q9BU76 263 aaKnown RBP10.88□□□□□ -0.67
HDAC6-207ENST00000430858 NT5C3AQ9H0P0 336 aa10.88□□□□□ -0.67
HDAC6-207ENST00000430858 NSUN3Q9H649 340 aaKnown RBP10.88□□□□□ -0.67
HDAC6-207ENST00000430858 CWH43Q9H720 699 aa10.88□□□□□ -0.67
HDAC6-207ENST00000430858 ALG13Q9NP73 1137 aaKnown RBP10.88□□□□□ -0.67
HDAC6-207ENST00000430858 PCDHB2Q9Y5E7 798 aa10.88□□□□□ -0.67
HDAC6-207ENST00000430858 RALGAPA2Q2PPJ7 1873 aa10.87□□□□□ -0.67
HDAC6-207ENST00000430858 CARNS1A5YM72 827 aa10.87□□□□□ -0.67
HDAC6-207ENST00000430858 LRRIQ4A6NIV6 560 aa10.87□□□□□ -0.67
HDAC6-207ENST00000430858 SLC26A4O43511 780 aa10.87□□□□□ -0.67
HDAC6-207ENST00000430858 NAMPTP43490 491 aa10.87□□□□□ -0.67
HDAC6-207ENST00000430858 PPP2R5AQ15172 486 aa10.87□□□□□ -0.67
HDAC6-207ENST00000430858 AMHR2Q16671 573 aa10.87□□□□□ -0.67
HDAC6-207ENST00000430858 HYIQ5T013 277 aa10.87□□□□□ -0.67
HDAC6-207ENST00000430858 UBXN11Q5T124 520 aa10.87□□□□□ -0.67
HDAC6-207ENST00000430858 CDCA2Q69YH5 1023 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-207ENST00000430858 LRRC55Q6ZSA7 311 aa10.87□□□□□ -0.67
HDAC6-207ENST00000430858 MRPL10Q7Z7H8 261 aaKnown RBP10.87□□□□□ -0.67
HDAC6-207ENST00000430858 HSCBQ8IWL3 235 aa10.87□□□□□ -0.67
HDAC6-207ENST00000430858 ZBTB8OSQ8IWT0 167 aa10.87□□□□□ -0.67
HDAC6-207ENST00000430858 COLGALT1Q8NBJ5 622 aa10.87□□□□□ -0.67
HDAC6-207ENST00000430858 SPPL3Q8TCT6 385 aa10.87□□□□□ -0.67
HDAC6-207ENST00000430858 HELQQ8TDG4 1101 aa10.87□□□□□ -0.67
HDAC6-207ENST00000430858 POF1BQ8WVV4 589 aa10.87□□□□□ -0.67
HDAC6-207ENST00000430858 KIFAP3Q92845 792 aa10.87□□□□□ -0.67
HDAC6-207ENST00000430858 PRIMPOLQ96LW4 560 aa10.87□□□□□ -0.67
HDAC6-207ENST00000430858 C2orf40Q9H1Z8 148 aa10.87□□□□□ -0.67
HDAC6-207ENST00000430858 CNTNAP2Q9UHC6 1331 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 ARID2Q68CP9 1835 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 E9PMD0 336 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 DLL1O00548 723 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 NCK2O43639 380 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 OFD1O75665 1012 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 FGF18O76093 207 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 PDIA4P13667 645 aaKnown RBP10.86□□□□□ -0.67
HDAC6-207ENST00000430858 ARF4P18085 180 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-207ENST00000430858 NCLP19338 710 aaKnown RBP10.86□□□□□ -0.67
HDAC6-207ENST00000430858 PPM1AP35813 382 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 PLCB3Q01970 1234 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 RESTQ13127 1097 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 CAMK1Q14012 370 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 SF3A1Q15459 793 aaKnown RBP10.86□□□□□ -0.67
HDAC6-207ENST00000430858 FAM187BQ17R55 369 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 TCEAL5Q5H9L2 206 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 NOMO2Q5JPE7 1267 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 KCNT2Q6UVM3 1135 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 THNSL1Q8IYQ7 743 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 DEPTORQ8TB45 409 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 BSNDQ8WZ55 320 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 LPPQ93052 612 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 PPP2R3CQ969Q6 453 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 CDK5RAP3Q96JB5 506 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 IFT74Q96LB3 600 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 ZNF558Q96NG5 402 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 CSRNP2Q9H175 543 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 FZD8Q9H461 694 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 ZSCAN16Q9H4T2 348 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-207ENST00000430858 RSAD1Q9HA92 442 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 UBN1Q9NPG3 1134 aa10.86□□□□□ -0.67
HDAC6-207ENST00000430858 FOXD4L1Q9NU39 408 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms