RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 KRT76Q01546 638 aa11.39□□□□□ -0.59
ATG4B-212ENST00000430617 CSTF1Q05048 431 aaKnown RBP11.39□□□□□ -0.59
ATG4B-212ENST00000430617 SPEM2Q0P670 501 aa11.39□□□□□ -0.59
ATG4B-212ENST00000430617 CPLX2Q6PUV4 134 aaKnown RBP11.39□□□□□ -0.59
ATG4B-212ENST00000430617 TMEM173Q86WV6 379 aaPredicted RBP11.39□□□□□ -0.59
ATG4B-212ENST00000430617 STAG2Q8N3U4 1231 aa11.39□□□□□ -0.59
ATG4B-212ENST00000430617 SRBD1Q8N5C6 995 aaKnown RBP11.39□□□□□ -0.59
ATG4B-212ENST00000430617 ST13P5Q8NFI4 369 aaPredicted RBP11.39□□□□□ -0.59
ATG4B-212ENST00000430617 ATRIPQ8WXE1 791 aa11.39□□□□□ -0.59
ATG4B-212ENST00000430617 SECISBP2LQ93073 1101 aaKnown RBP11.39□□□□□ -0.59
ATG4B-212ENST00000430617 PHKBQ93100 1093 aa11.39□□□□□ -0.59
ATG4B-212ENST00000430617 RNF26Q9BY78 433 aaPredicted RBP11.39□□□□□ -0.59
ATG4B-212ENST00000430617 TMEM117Q9H0C3 514 aa11.39□□□□□ -0.59
ATG4B-212ENST00000430617 ZBP1Q9H171 429 aa11.39□□□□□ -0.59
ATG4B-212ENST00000430617 SFXN1Q9H9B4 322 aa11.39□□□□□ -0.59
ATG4B-212ENST00000430617 SPATA6Q9NWH7 488 aaPredicted RBP11.39□□□□□ -0.59
ATG4B-212ENST00000430617 ORC3Q9UBD5 711 aaPredicted RBP11.39□□□□□ -0.59
ATG4B-212ENST00000430617 MTMR6Q9Y217 621 aa11.39□□□□□ -0.59
ATG4B-212ENST00000430617 GINS2Q9Y248 185 aa11.39□□□□□ -0.59
ATG4B-212ENST00000430617 MTF2Q9Y483 593 aaPredicted RBP11.39□□□□□ -0.59
ATG4B-212ENST00000430617 PCDHGA2Q9Y5H1 932 aa11.39□□□□□ -0.59
ATG4B-212ENST00000430617 PCDHA2Q9Y5H9 948 aa11.39□□□□□ -0.59
ATG4B-212ENST00000430617 DMXL2Q8TDJ6 3036 aa11.38□□□□□ -0.59
ATG4B-212ENST00000430617 GCOM1H8Y6P7 765 aaPredicted RBP11.38□□□□□ -0.59
ATG4B-212ENST00000430617 STX6O43752 255 aa11.38□□□□□ -0.59
ATG4B-212ENST00000430617 RPS6KA5O75582 802 aa11.38□□□□□ -0.59
ATG4B-212ENST00000430617 POLR2MP0CAP2 368 aa11.38□□□□□ -0.59
ATG4B-212ENST00000430617 KCNA4P22459 653 aa11.38□□□□□ -0.59
ATG4B-212ENST00000430617 PLCB4Q15147 1175 aa11.38□□□□□ -0.59
ATG4B-212ENST00000430617 PTPN14Q15678 1187 aa11.38□□□□□ -0.59
ATG4B-212ENST00000430617 ASPRV1Q53RT3 343 aa11.38□□□□□ -0.59
ATG4B-212ENST00000430617 N4BP2L1Q5TBK1 243 aaPredicted RBP11.38□□□□□ -0.59
ATG4B-212ENST00000430617 DCLRE1AQ6PJP8 1040 aa11.38□□□□□ -0.59
ATG4B-212ENST00000430617 TSSK4Q6SA08 328 aa11.38□□□□□ -0.59
ATG4B-212ENST00000430617 VPS52Q8N1B4 723 aa11.38□□□□□ -0.59
ATG4B-212ENST00000430617 CMTR1Q8N1G2 835 aaKnown RBP11.38□□□□□ -0.59
ATG4B-212ENST00000430617 LRRC43Q8N309 656 aa11.38□□□□□ -0.59
ATG4B-212ENST00000430617 NETO1Q8TDF5 533 aa11.38□□□□□ -0.59
ATG4B-212ENST00000430617 NELL1Q92832 810 aa11.38□□□□□ -0.59
ATG4B-212ENST00000430617 GLG1Q92896 1179 aa11.38□□□□□ -0.59
ATG4B-212ENST00000430617 MTMR8Q96EF0 704 aa11.38□□□□□ -0.59
ATG4B-212ENST00000430617 MYADMQ96S97 322 aa11.38□□□□□ -0.59
ATG4B-212ENST00000430617 PCYT2Q99447 389 aa11.38□□□□□ -0.59
ATG4B-212ENST00000430617 SENP7Q9BQF6 1050 aa11.38□□□□□ -0.59
ATG4B-212ENST00000430617 SPZ1Q9BXG8 430 aa11.38□□□□□ -0.59
ATG4B-212ENST00000430617 SLC26A6Q9BXS9 759 aa11.38□□□□□ -0.59
ATG4B-212ENST00000430617 FBXO4Q9UKT5 387 aa11.38□□□□□ -0.59
ATG4B-212ENST00000430617 PDCD11Q14690 1871 aaKnown RBP11.38□□□□□ -0.59
ATG4B-212ENST00000430617 SDK1Q7Z5N4 2213 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 NOTCH4Q99466 2003 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 RRN3P2A6NIE6 340 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 LAMTOR5O43504 91 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 CYTH3O43739 400 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 GDF9O60383 454 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 STAM2O75886 525 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 DEXIO95424 95 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 RPLP2P05387 115 aaKnown RBP11.37□□□□□ -0.59
ATG4B-212ENST00000430617 PROS1P07225 676 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 PARP1P09874 1014 aaKnown RBP11.37□□□□□ -0.59
ATG4B-212ENST00000430617 KCNA2P16389 499 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 PDCP20941 246 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 GBP2P32456 591 aaPredicted RBP11.37□□□□□ -0.59
ATG4B-212ENST00000430617 GNAQP50148 359 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 STARD6P59095 220 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 SHC2P98077 582 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 DSC3Q14574 896 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 CLLU1OSQ5K130 101 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 SAMD3Q8N6K7 520 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 FAM184AQ8NB25 1140 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 SEPT1Q8WYJ6 367 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 BORCS6Q96GS4 357 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 AIFM3Q96NN9 605 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 SMARCAD1Q9H4L7 1026 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 ELAC1Q9H777 363 aaKnown RBP11.37□□□□□ -0.59
ATG4B-212ENST00000430617 ZSCAN32Q9NX65 697 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 ZMIZ1Q9ULJ6 1067 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 KIF3AQ9Y496 699 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 IRAK3Q9Y616 596 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 FLNBO75369 2602 aaKnown RBP11.37□□□□□ -0.59
ATG4B-212ENST00000430617 ADAMTS20P59510 1910 aa11.37□□□□□ -0.59
ATG4B-212ENST00000430617 ITPR1Q14643 2758 aa11.36□□□□□ -0.59
ATG4B-212ENST00000430617 SMIM35A0A1B0GVV1 85 aa11.36□□□□□ -0.59
ATG4B-212ENST00000430617 ZBTB5O15062 677 aa11.36□□□□□ -0.59
ATG4B-212ENST00000430617 PRPF3O43395 683 aaKnown RBP11.36□□□□□ -0.59
ATG4B-212ENST00000430617 ZSCAN22P10073 491 aaPredicted RBP11.36□□□□□ -0.59
ATG4B-212ENST00000430617 SMARCA1P28370 1054 aa11.36□□□□□ -0.59
ATG4B-212ENST00000430617 BCAR1P56945 870 aa11.36□□□□□ -0.59
ATG4B-212ENST00000430617 SSRP1Q08945 709 aaKnown RBP11.36□□□□□ -0.59
ATG4B-212ENST00000430617 LPAL2Q16609 132 aa11.36□□□□□ -0.59
ATG4B-212ENST00000430617 LARP1BQ659C4 914 aaKnown RBP11.36□□□□□ -0.59
ATG4B-212ENST00000430617 FAM228AQ86W67 206 aa11.36□□□□□ -0.59
ATG4B-212ENST00000430617 TRIM22Q8IYM9 498 aa11.36□□□□□ -0.59
ATG4B-212ENST00000430617 BCL7CQ8WUZ0 217 aaPredicted RBP11.36□□□□□ -0.59
ATG4B-212ENST00000430617 PPP1R16BQ96T49 567 aa11.36□□□□□ -0.59
ATG4B-212ENST00000430617 LZTS2Q9BRK4 669 aa11.36□□□□□ -0.59
ATG4B-212ENST00000430617 EPS15L1Q9UBC2 864 aa11.36□□□□□ -0.59
ATG4B-212ENST00000430617 TDRD15B5MCY1 1934 aaKnown RBP11.36□□□□□ -0.59
ATG4B-212ENST00000430617 ASH1LQ9NR48 2969 aaKnown RBP11.36□□□□□ -0.59
ATG4B-212ENST00000430617 SMG1Q96Q15 3661 aaKnown RBP11.36□□□□□ -0.59
ATG4B-212ENST00000430617 VPS37CA5D8V6 355 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms