RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 PSD3Q9NYI0 1048 aa17.44■□□□□ 0.38
RIF1-204ENST00000430328 DTNAQ9Y4J8 743 aa17.44■□□□□ 0.38
RIF1-204ENST00000430328 ASXL1Q8IXJ9 1541 aa17.44■□□□□ 0.38
RIF1-204ENST00000430328 FRMPD2Q68DX3 1309 aaPredicted RBP17.44■□□□□ 0.38
RIF1-204ENST00000430328 ALAS1P13196 640 aa17.44■□□□□ 0.38
RIF1-204ENST00000430328 COPB2P35606 906 aa17.44■□□□□ 0.38
RIF1-204ENST00000430328 RPS6P62753 249 aaKnown RBP17.44■□□□□ 0.38
RIF1-204ENST00000430328 MMRN1Q13201 1228 aa17.44■□□□□ 0.38
RIF1-204ENST00000430328 CCDC60Q8IWA6 550 aaPredicted RBP17.44■□□□□ 0.38
RIF1-204ENST00000430328 FAM45AQ8TCE6 357 aa17.44■□□□□ 0.38
RIF1-204ENST00000430328 TMA7Q9Y2S6 64 aaKnown RBP17.44■□□□□ 0.38
RIF1-204ENST00000430328 FKBP9O95302 570 aa17.44■□□□□ 0.38
RIF1-204ENST00000430328 NUP107P57740 925 aa17.44■□□□□ 0.38
RIF1-204ENST00000430328 FKBP9P1Q75LS8 142 aa17.44■□□□□ 0.38
RIF1-204ENST00000430328 CDC40O60508 579 aaKnown RBP eCLIP17.44■□□□□ 0.38
RIF1-204ENST00000430328 PRKCQQ04759 706 aa17.44■□□□□ 0.38
RIF1-204ENST00000430328 LRRC59Q96AG4 307 aaKnown RBP17.44■□□□□ 0.38
RIF1-204ENST00000430328 FAM129AQ9BZQ8 928 aa17.44■□□□□ 0.38
RIF1-204ENST00000430328 EIF4A3P38919 411 aaKnown RBP17.44■□□□□ 0.38
RIF1-204ENST00000430328 SLC16A1P53985 500 aa17.44■□□□□ 0.38
RIF1-204ENST00000430328 ALDH18A1P54886 795 aaKnown RBP17.44■□□□□ 0.38
RIF1-204ENST00000430328 IKBIPQ70UQ0 350 aa17.44■□□□□ 0.38
RIF1-204ENST00000430328 ERICH1Q86X53 443 aa17.44■□□□□ 0.38
RIF1-204ENST00000430328 GALNT4Q8N4A0 578 aa17.44■□□□□ 0.38
RIF1-204ENST00000430328 CNBD1Q8NA66 436 aa17.44■□□□□ 0.38
RIF1-204ENST00000430328 ALBP02768 609 aa17.43■□□□□ 0.38
RIF1-204ENST00000430328 CYP19A1P11511 503 aaPredicted RBP17.43■□□□□ 0.38
RIF1-204ENST00000430328 NNMTP40261 264 aa17.43■□□□□ 0.38
RIF1-204ENST00000430328 PABPC4Q13310 644 aaKnown RBP eCLIP17.43■□□□□ 0.38
RIF1-204ENST00000430328 ZNF467Q7Z7K2 595 aaPredicted RBP17.43■□□□□ 0.38
RIF1-204ENST00000430328 SRLQ86TD4 932 aa17.43■□□□□ 0.38
RIF1-204ENST00000430328 PPM1NQ8N819 430 aa17.43■□□□□ 0.38
RIF1-204ENST00000430328 FAM162AQ96A26 154 aa17.43■□□□□ 0.38
RIF1-204ENST00000430328 AFF4Q9UHB7 1163 aaKnown RBP17.43■□□□□ 0.38
RIF1-204ENST00000430328 HEY1Q9Y5J3 304 aa17.43■□□□□ 0.38
RIF1-204ENST00000430328 PIPSLA2A3N6 862 aa17.43■□□□□ 0.38
RIF1-204ENST00000430328 ERAP1Q9NZ08 941 aa17.43■□□□□ 0.38
RIF1-204ENST00000430328 CSE1LP55060 971 aaKnown RBP17.43■□□□□ 0.38
RIF1-204ENST00000430328 MEI1Q5TIA1 1274 aa17.43■□□□□ 0.38
RIF1-204ENST00000430328 FBXO38Q6PIJ6 1188 aa17.43■□□□□ 0.38
RIF1-204ENST00000430328 DHX36Q9H2U1 1008 aaKnown RBP17.43■□□□□ 0.38
RIF1-204ENST00000430328 FARP1Q9Y4F1 1045 aaPredicted RBP17.43■□□□□ 0.38
RIF1-204ENST00000430328 ZNF532Q9HCE3 1301 aa17.43■□□□□ 0.38
RIF1-204ENST00000430328 XPO1O14980 1071 aaKnown RBP17.43■□□□□ 0.38
RIF1-204ENST00000430328 NEK10Q6ZWH5 1172 aa17.43■□□□□ 0.38
RIF1-204ENST00000430328 PRUNE1Q86TP1 453 aa17.43■□□□□ 0.38
RIF1-204ENST00000430328 NGRNQ9NPE2 291 aaKnown RBP17.43■□□□□ 0.38
RIF1-204ENST00000430328 NRBP1Q9UHY1 535 aa17.43■□□□□ 0.38
RIF1-204ENST00000430328 LRRC53A6NM62 1247 aa17.43■□□□□ 0.38
RIF1-204ENST00000430328 CENPXA8MT69 81 aa17.43■□□□□ 0.38
RIF1-204ENST00000430328 PLOD1Q02809 727 aaPredicted RBP17.43■□□□□ 0.38
RIF1-204ENST00000430328 CYP4A11Q02928 519 aa17.43■□□□□ 0.38
RIF1-204ENST00000430328 COG2Q14746 738 aa17.43■□□□□ 0.38
RIF1-204ENST00000430328 SFR1Q86XK3 245 aa17.43■□□□□ 0.38
RIF1-204ENST00000430328 ZSCAN10Q96SZ4 725 aaPredicted RBP17.43■□□□□ 0.38
RIF1-204ENST00000430328 GOLGA4Q13439 2230 aaKnown RBP17.43■□□□□ 0.38
RIF1-204ENST00000430328 CLASP2O75122 1294 aaKnown RBP17.43■□□□□ 0.38
RIF1-204ENST00000430328 FLT3P36888 993 aa17.43■□□□□ 0.38
RIF1-204ENST00000430328 COX10Q12887 443 aa17.43■□□□□ 0.38
RIF1-204ENST00000430328 POLA2Q14181 598 aa17.43■□□□□ 0.38
RIF1-204ENST00000430328 DSCC1Q9BVC3 393 aa17.43■□□□□ 0.38
RIF1-204ENST00000430328 GYS2P54840 703 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 CDC37Q16543 378 aaPredicted RBP17.42■□□□□ 0.38
RIF1-204ENST00000430328 ME3Q16798 604 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 ZNF658Q5TYW1 1059 aaPredicted RBP17.42■□□□□ 0.38
RIF1-204ENST00000430328 LONP2Q86WA8 852 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 PPP1R36Q96LQ0 422 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 FOPNLQ96NB1 174 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.42■□□□□ 0.387e-11■■■■□ 26.1
RIF1-204ENST00000430328 CFAP99D6REC4 459 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 PLIN5Q00G26 463 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 FASTKD5Q7L8L6 764 aaKnown RBP17.42■□□□□ 0.38
RIF1-204ENST00000430328 KCNK16Q96T55 309 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 ZBTB40Q9NUA8 1239 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 EYA2O00167 538 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 C6orf10Q5SRN2 563 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 GMEB1Q9Y692 573 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 NCKAP1LP55160 1127 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 SLC25A24Q6NUK1 477 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 UBA6A0AVT1 1052 aaPredicted RBP17.42■□□□□ 0.38
RIF1-204ENST00000430328 TYK2P29597 1187 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 HPCAP84074 193 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 KPNB1Q14974 876 aaKnown RBP17.42■□□□□ 0.38
RIF1-204ENST00000430328 TMC2Q8TDI7 906 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 GLMNQ92990 594 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 SLITRK6Q9H5Y7 841 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 SERPINB13Q9UIV8 391 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 MYL1P05976 194 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 ENO3P13929 434 aaPredicted RBP17.42■□□□□ 0.38
RIF1-204ENST00000430328 ZBED6P86452 979 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 LRRC31Q6UY01 552 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 AGR3Q8TD06 166 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 MRPL48Q96GC5 212 aaKnown RBP17.42■□□□□ 0.38
RIF1-204ENST00000430328 CHMP2BQ9UQN3 213 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 ABCC12Q96J65 1359 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 IKBKBO14920 756 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 STX7O15400 261 aaKnown RBP17.42■□□□□ 0.38
RIF1-204ENST00000430328 ARPP19P56211 112 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 GPR141Q7Z602 305 aa17.42■□□□□ 0.38
RIF1-204ENST00000430328 KIRREL3Q8IZU9 778 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms