RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 BMP8AQ7Z5Y6 402 aa3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 RTKN2Q8IZC4 609 aa3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 COG1Q8WTW3 980 aa3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 PMM1Q92871 262 aa3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 ZG16BQ96DA0 208 aa3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 SMAD5Q99717 465 aaKnown RBP3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 SEC61A2Q9H9S3 476 aa3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 MSL2Q9HCI7 577 aa3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 KCMF1Q9P0J7 381 aa3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 VWA7Q9Y334 891 aa3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 TNFRSF18Q9Y5U5 241 aa3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 SLC4A7Q9Y6M7 1214 aa3.96□□□□□ -1.78
HMGB1P9-201ENST00000429856 ST20-MTHFSA0A0A6YYL1 179 aa3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 PRPF6O94906 941 aaKnown RBP3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 ID4P47928 161 aa3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 RGS3P49796 1198 aa3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 ADCY2Q08462 1091 aa3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 STRN3Q13033 797 aa3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 MYBPC3Q14896 1274 aa3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 TERF2Q15554 542 aa3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 DDB1Q16531 1140 aa3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 LSM12Q3MHD2 195 aaKnown RBP3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 TRIM68Q6AZZ1 485 aa3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 KIAA1841Q6NSI8 718 aa3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 FRMD7Q6ZUT3 714 aa3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 KANSL1Q7Z3B3 1105 aa3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 GPR155Q7Z3F1 870 aa3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 WDR75Q8IWA0 830 aaKnown RBP3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 OR5AN1Q8NGI8 311 aa3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 ATL2Q8NHH9 583 aa3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 RTF1Q92541 710 aaKnown RBP3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 SLC5A5Q92911 643 aa3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 LPPQ93052 612 aa3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 CRAMP1Q96RY5 1269 aa3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 ADOQ96SZ5 270 aa3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 WNT8AQ9H1J5 351 aa3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 SAE1Q9UBE0 346 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 KCNG1Q9UIX4 513 aa3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 MSRAQ9UJ68 235 aa3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 MCM8Q9UJA3 840 aa3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 SYNPO2Q9UMS6 1093 aa3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 ZFR2Q9UPR6 939 aaKnown RBP3.95□□□□□ -1.78
HMGB1P9-201ENST00000429856 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P9-201ENST00000429856 NARSO43776 548 aaKnown RBP3.94□□□□□ -1.78
HMGB1P9-201ENST00000429856 H2AFYO75367 372 aaKnown RBP3.94□□□□□ -1.78
HMGB1P9-201ENST00000429856 ZNF888P0CJ79 500 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P9-201ENST00000429856 SESN3P58005 492 aa3.94□□□□□ -1.78
HMGB1P9-201ENST00000429856 FAPQ12884 760 aa3.94□□□□□ -1.78
HMGB1P9-201ENST00000429856 NFYCQ13952 458 aa3.94□□□□□ -1.78
HMGB1P9-201ENST00000429856 NOLC1Q14978 699 aaKnown RBP eCLIP3.94□□□□□ -1.78
HMGB1P9-201ENST00000429856 PCOLCEQ15113 449 aa3.94□□□□□ -1.78
HMGB1P9-201ENST00000429856 USP39Q53GS9 565 aaKnown RBP3.94□□□□□ -1.78
HMGB1P9-201ENST00000429856 AGBL4Q5VU57 503 aa3.94□□□□□ -1.78
HMGB1P9-201ENST00000429856 KLHDC10Q6PID8 442 aa3.94□□□□□ -1.78
HMGB1P9-201ENST00000429856 RASSF3Q86WH2 238 aa3.94□□□□□ -1.78
HMGB1P9-201ENST00000429856 GFM2Q969S9 779 aaKnown RBP3.94□□□□□ -1.78
HMGB1P9-201ENST00000429856 FERMT2Q96AC1 680 aa3.94□□□□□ -1.78
HMGB1P9-201ENST00000429856 C8orf48Q96LL4 319 aa3.94□□□□□ -1.78
HMGB1P9-201ENST00000429856 MYL10Q9BUA6 226 aa3.94□□□□□ -1.78
HMGB1P9-201ENST00000429856 RTFDC1Q9BY42 306 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P9-201ENST00000429856 PITHD1Q9GZP4 211 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P9-201ENST00000429856 OR10A2Q9H208 303 aa3.94□□□□□ -1.78
HMGB1P9-201ENST00000429856 POFUT1Q9H488 388 aa3.94□□□□□ -1.78
HMGB1P9-201ENST00000429856 POLR3BQ9NW08 1133 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P9-201ENST00000429856 CDC42EP3Q9UKI2 254 aa3.94□□□□□ -1.78
HMGB1P9-201ENST00000429856 NOC2LQ9Y3T9 749 aaKnown RBP3.94□□□□□ -1.78
HMGB1P9-201ENST00000429856 PHLDB1Q86UU1 1377 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 PLEKHD1A6NEE1 506 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 ALG1L2C9J202 215 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 NEMP1O14524 444 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 ARHGAP6O43182 974 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 GPR39O43194 453 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 PRPF3O43395 683 aaKnown RBP3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 AKAP10O43572 662 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 PRC1O43663 620 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 KDM1AO60341 852 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 APOL3O95236 402 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 GNALP38405 381 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 MRE11P49959 708 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 RAB27AP51159 221 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 ATXN1P54253 815 aaKnown RBP3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 RRADP55042 308 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 RHBDL3P58872 404 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 RAC3P60763 192 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 PTH1RQ03431 593 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 HNRNPA0Q13151 305 aaKnown RBP3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 STAT4Q14765 748 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 MAP9Q49MG5 647 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 BROXQ5VW32 411 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 DPY19L2P1Q6NXN4 242 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 USP30Q70CQ3 517 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 HDGFL2Q7Z4V5 671 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 C14orf80Q86SX3 495 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 EXOC8Q8IYI6 725 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 GIMAP8Q8ND71 665 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 RSAD2Q8WXG1 361 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 MTMR8Q96EF0 704 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 NAF1Q96HR8 494 aaKnown RBP3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 HIST1H2AHQ96KK5 128 aa3.93□□□□□ -1.78
HMGB1P9-201ENST00000429856 HIST1H2AJQ99878 128 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms