RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	BAG4	O95429	457 aa	Known RBP	19.84	■□□□□ 0.77
MRPL28-203	ENST00000429738	C8orf34	Q49A92	452 aa		19.84	■□□□□ 0.77
MRPL28-203	ENST00000429738	NCAPH2	Q6IBW4	605 aa		19.84	■□□□□ 0.77
MRPL28-203	ENST00000429738	LRRC55	Q6ZSA7	311 aa		19.84	■□□□□ 0.77
MRPL28-203	ENST00000429738	RHPN2	Q8IUC4	686 aa		19.84	■□□□□ 0.77
MRPL28-203	ENST00000429738	THNSL1	Q8IYQ7	743 aa		19.84	■□□□□ 0.77
MRPL28-203	ENST00000429738	COLGALT1	Q8NBJ5	622 aa		19.84	■□□□□ 0.77
MRPL28-203	ENST00000429738	ASIC4	Q96FT7	647 aa		19.84	■□□□□ 0.77
MRPL28-203	ENST00000429738	KIF2C	Q99661	725 aa		19.84	■□□□□ 0.77
MRPL28-203	ENST00000429738	S1PR5	Q9H228	398 aa		19.84	■□□□□ 0.77
MRPL28-203	ENST00000429738	CHST12	Q9NRB3	414 aa		19.84	■□□□□ 0.77
MRPL28-203	ENST00000429738	DACT1	Q9NYF0	836 aa		19.84	■□□□□ 0.77
MRPL28-203	ENST00000429738	RGL1	Q9NZL6	768 aa		19.84	■□□□□ 0.77
MRPL28-203	ENST00000429738	LIMCH1	Q9UPQ0	1083 aa		19.84	■□□□□ 0.77
MRPL28-203	ENST00000429738	EOMES	O95936	686 aa		19.83	■□□□□ 0.77
MRPL28-203	ENST00000429738	AVPR2	P30518	371 aa		19.83	■□□□□ 0.77
MRPL28-203	ENST00000429738	YWHAB	P31946	246 aa	Known RBP	19.83	■□□□□ 0.77
MRPL28-203	ENST00000429738	KCNC3	Q14003	757 aa		19.83	■□□□□ 0.77
MRPL28-203	ENST00000429738	EXOC8	Q8IYI6	725 aa		19.83	■□□□□ 0.77
MRPL28-203	ENST00000429738	SLC7A3	Q8WY07	619 aa		19.83	■□□□□ 0.77
MRPL28-203	ENST00000429738	DYDC2	Q96IM9	177 aa		19.83	■□□□□ 0.77
MRPL28-203	ENST00000429738	CEP170P1	Q96L14	293 aa		19.83	■□□□□ 0.77
MRPL28-203	ENST00000429738	SNX27	Q96L92	541 aa		19.83	■□□□□ 0.77
MRPL28-203	ENST00000429738	INO80B	Q9C086	356 aa	Predicted RBP	19.83	■□□□□ 0.77
MRPL28-203	ENST00000429738	IRF2BPL	Q9H1B7	796 aa		19.83	■□□□□ 0.77
MRPL28-203	ENST00000429738	ZSWIM4	Q9H7M6	989 aa		19.83	■□□□□ 0.77
MRPL28-203	ENST00000429738	IFT122	Q9HBG6	1241 aa		19.83	■□□□□ 0.77
MRPL28-203	ENST00000429738	PUF60	Q9UHX1	559 aa	Known RBP	19.83	■□□□□ 0.77
MRPL28-203	ENST00000429738	LZTS1	Q9Y250	596 aa		19.83	■□□□□ 0.77
MRPL28-203	ENST00000429738	MYO10	Q9HD67	2058 aa		19.82	■□□□□ 0.76
MRPL28-203	ENST00000429738	KMT2E	Q8IZD2	1858 aa		19.82	■□□□□ 0.76
MRPL28-203	ENST00000429738	MARCH6	O60337	910 aa		19.82	■□□□□ 0.76
MRPL28-203	ENST00000429738	SLITRK3	O94933	977 aa		19.82	■□□□□ 0.76
MRPL28-203	ENST00000429738	SRGAP2B	P0DMP2	458 aa		19.82	■□□□□ 0.76
MRPL28-203	ENST00000429738	LAG3	P18627	525 aa		19.82	■□□□□ 0.76
MRPL28-203	ENST00000429738	SFPQ	P23246	707 aa	Known RBP eCLIP	19.82	■□□□□ 0.76
MRPL28-203	ENST00000429738	RFC5	P40937	340 aa		19.82	■□□□□ 0.76
MRPL28-203	ENST00000429738	VCP	P55072	806 aa	Known RBP	19.82	■□□□□ 0.76
MRPL28-203	ENST00000429738	TRIM29	Q14134	588 aa		19.82	■□□□□ 0.76
MRPL28-203	ENST00000429738	CALCRL	Q16602	461 aa		19.82	■□□□□ 0.76
MRPL28-203	ENST00000429738	PTPN21	Q16825	1174 aa		19.82	■□□□□ 0.76
MRPL28-203	ENST00000429738	CLLU1OS	Q5K130	101 aa		19.82	■□□□□ 0.76
MRPL28-203	ENST00000429738	ANKRD54	Q6NXT1	300 aa		19.82	■□□□□ 0.76
MRPL28-203	ENST00000429738	KSR1	Q8IVT5	923 aa		19.82	■□□□□ 0.76
MRPL28-203	ENST00000429738	MTMR9	Q96QG7	549 aa		19.82	■□□□□ 0.76
MRPL28-203	ENST00000429738	COL4A3BP	Q9Y5P4	624 aa		19.82	■□□□□ 0.76
MRPL28-203	ENST00000429738	GAS2	O43903	313 aa	Known RBP	19.81	■□□□□ 0.76
MRPL28-203	ENST00000429738	LYPLA2	O95372	231 aa		19.81	■□□□□ 0.76
MRPL28-203	ENST00000429738	TEC	P42680	631 aa		19.81	■□□□□ 0.76
MRPL28-203	ENST00000429738	FOSB	P53539	338 aa		19.81	■□□□□ 0.76
MRPL28-203	ENST00000429738	POLG	P54098	1239 aa	Predicted RBP	19.81	■□□□□ 0.76
MRPL28-203	ENST00000429738	PLCB3	Q01970	1234 aa		19.81	■□□□□ 0.76
MRPL28-203	ENST00000429738	CTTN	Q14247	550 aa	Known RBP	19.81	■□□□□ 0.76
MRPL28-203	ENST00000429738	SYCE2	Q6PIF2	218 aa		19.81	■□□□□ 0.76
MRPL28-203	ENST00000429738	OTUD6A	Q7L8S5	288 aa		19.81	■□□□□ 0.76
MRPL28-203	ENST00000429738	LRRC43	Q8N309	656 aa		19.81	■□□□□ 0.76
MRPL28-203	ENST00000429738	MRPS27	Q92552	414 aa	Known RBP	19.81	■□□□□ 0.76
MRPL28-203	ENST00000429738	NLRP4	Q96MN2	994 aa		19.81	■□□□□ 0.76
MRPL28-203	ENST00000429738	HSD17B14	Q9BPX1	270 aa		19.81	■□□□□ 0.76
MRPL28-203	ENST00000429738	EIF2AK1	Q9BQI3	630 aa	Known RBP	19.81	■□□□□ 0.76
MRPL28-203	ENST00000429738	LLPH	Q9BRT6	129 aa	Known RBP	19.81	■□□□□ 0.76
MRPL28-203	ENST00000429738	PCDHA12	Q9UN75	941 aa		19.81	■□□□□ 0.76
MRPL28-203	ENST00000429738	ZBTB39	O15060	712 aa		19.8	■□□□□ 0.76
MRPL28-203	ENST00000429738	NEMF	O60524	1076 aa		19.8	■□□□□ 0.76
MRPL28-203	ENST00000429738	PHKA2	P46019	1235 aa		19.8	■□□□□ 0.76
MRPL28-203	ENST00000429738	CYP4A11	Q02928	519 aa		19.8	■□□□□ 0.76
MRPL28-203	ENST00000429738	PLPP4	Q5VZY2	271 aa		19.8	■□□□□ 0.76
MRPL28-203	ENST00000429738	CCDC83	Q8IWF9	413 aa		19.8	■□□□□ 0.76
MRPL28-203	ENST00000429738	TTC12	Q9H892	705 aa	Predicted RBP	19.8	■□□□□ 0.76
MRPL28-203	ENST00000429738	NGRN	Q9NPE2	291 aa	Known RBP	19.8	■□□□□ 0.76
MRPL28-203	ENST00000429738	RIF1	Q5UIP0	2472 aa	Known RBP	19.8	■□□□□ 0.76
MRPL28-203	ENST00000429738	GFRA3	O60609	400 aa		19.79	■□□□□ 0.76
MRPL28-203	ENST00000429738	HOXB8	P17481	243 aa	Predicted RBP	19.79	■□□□□ 0.76
MRPL28-203	ENST00000429738	NUBP1	P53384	320 aa		19.79	■□□□□ 0.76
MRPL28-203	ENST00000429738	XKR9	Q5GH70	373 aa		19.79	■□□□□ 0.76
MRPL28-203	ENST00000429738	KCNT2	Q6UVM3	1135 aa		19.79	■□□□□ 0.76
MRPL28-203	ENST00000429738	ABI1	Q8IZP0	508 aa		19.79	■□□□□ 0.76
MRPL28-203	ENST00000429738	HELQ	Q8TDG4	1101 aa		19.79	■□□□□ 0.76
MRPL28-203	ENST00000429738	PRPF31	Q8WWY3	499 aa	Known RBP	19.79	■□□□□ 0.76
MRPL28-203	ENST00000429738	PSPC1	Q8WXF1	523 aa	Known RBP	19.79	■□□□□ 0.76
MRPL28-203	ENST00000429738	RSPH1	Q8WYR4	309 aa		19.79	■□□□□ 0.76
MRPL28-203	ENST00000429738	TMEM143	Q96AN5	459 aa		19.79	■□□□□ 0.76
MRPL28-203	ENST00000429738	TCF25	Q9BQ70	676 aa		19.79	■□□□□ 0.76
MRPL28-203	ENST00000429738	XPNPEP1	Q9NQW7	623 aa		19.79	■□□□□ 0.76
MRPL28-203	ENST00000429738	FAM86C1	Q9NVL1	165 aa		19.79	■□□□□ 0.76
MRPL28-203	ENST00000429738	ZNF623	O75123	536 aa		19.78	■□□□□ 0.76
MRPL28-203	ENST00000429738	SKI	P12755	728 aa		19.78	■□□□□ 0.76
MRPL28-203	ENST00000429738	LAMTOR4	Q0VGL1	99 aa		19.78	■□□□□ 0.76
MRPL28-203	ENST00000429738	EMC2	Q15006	297 aa		19.78	■□□□□ 0.76
MRPL28-203	ENST00000429738	CATSPER4	Q7RTX7	472 aa		19.78	■□□□□ 0.76
MRPL28-203	ENST00000429738	SRGAP1	Q7Z6B7	1085 aa		19.78	■□□□□ 0.76
MRPL28-203	ENST00000429738	ZBTB33	Q86T24	672 aa		19.78	■□□□□ 0.76
MRPL28-203	ENST00000429738	FERMT3	Q86UX7	667 aa		19.78	■□□□□ 0.76
MRPL28-203	ENST00000429738	TPH2	Q8IWU9	490 aa		19.78	■□□□□ 0.76
MRPL28-203	ENST00000429738	RNF169	Q8NCN4	708 aa		19.78	■□□□□ 0.76
MRPL28-203	ENST00000429738	TCP11	Q8WWU5	503 aa		19.78	■□□□□ 0.76
MRPL28-203	ENST00000429738	ATOH1	Q92858	354 aa	Predicted RBP	19.78	■□□□□ 0.76
MRPL28-203	ENST00000429738	ZSCAN31	Q96LW9	406 aa	Predicted RBP	19.78	■□□□□ 0.76
MRPL28-203	ENST00000429738	RIPOR3	Q96MK2	946 aa		19.78	■□□□□ 0.76
MRPL28-203	ENST00000429738	MTR	Q99707	1265 aa		19.78	■□□□□ 0.76

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms