RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 CTSWP56202 376 aa8.02□□□□□ -1.13
SYNPO2-202ENST00000429713 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.02□□□□□ -1.13
SYNPO2-202ENST00000429713 TP53INP1Q96A56 240 aa8.02□□□□□ -1.13
SYNPO2-202ENST00000429713 ZSCAN10Q96SZ4 725 aaPredicted RBP8.02□□□□□ -1.13
SYNPO2-202ENST00000429713 SNX12Q9UMY4 172 aa8.02□□□□□ -1.13
SYNPO2-202ENST00000429713 KIF1AQ12756 1690 aa8.02□□□□□ -1.13
SYNPO2-202ENST00000429713 BUB1O43683 1085 aa8.02□□□□□ -1.13
SYNPO2-202ENST00000429713 APOEP02649 317 aa8.02□□□□□ -1.13
SYNPO2-202ENST00000429713 ESRRAP11474 423 aaPredicted RBP8.02□□□□□ -1.13
SYNPO2-202ENST00000429713 EEF2P13639 858 aaKnown RBP8.02□□□□□ -1.13
SYNPO2-202ENST00000429713 TNNI2P48788 182 aa8.02□□□□□ -1.13
SYNPO2-202ENST00000429713 VSNL1P62760 191 aa8.02□□□□□ -1.13
SYNPO2-202ENST00000429713 TRMT1LQ7Z2T5 733 aaKnown RBP8.02□□□□□ -1.13
SYNPO2-202ENST00000429713 IFNL3Q8IZI9 196 aa8.02□□□□□ -1.13
SYNPO2-202ENST00000429713 H0Y626 953 aa8.02□□□□□ -1.13
SYNPO2-202ENST00000429713 H7C1W4 665 aa8.02□□□□□ -1.13
SYNPO2-202ENST00000429713 TRIM16O95361 564 aa8.02□□□□□ -1.13
SYNPO2-202ENST00000429713 ADARP55265 1226 aaKnown RBP8.02□□□□□ -1.13
SYNPO2-202ENST00000429713 SNX16P57768 344 aa8.02□□□□□ -1.13
SYNPO2-202ENST00000429713 C2orf54Q08AI8 447 aa8.02□□□□□ -1.13
SYNPO2-202ENST00000429713 TRAPPC11Q7Z392 1133 aa8.02□□□□□ -1.13
SYNPO2-202ENST00000429713 NCAPG2Q86XI2 1143 aa8.02□□□□□ -1.13
SYNPO2-202ENST00000429713 RHOT2Q8IXI1 618 aa8.02□□□□□ -1.13
SYNPO2-202ENST00000429713 A2ML1A8K2U0 1454 aa8.02□□□□□ -1.13
SYNPO2-202ENST00000429713 USP27XA6NNY8 438 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 UBAP1LF5GYI3 381 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 TTC4O95801 387 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 ACTN1P12814 892 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 PSMD6Q15008 389 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 LRRC36Q1X8D7 754 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 PARP10Q53GL7 1025 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 C1orf228Q6PIY5 440 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 COL23A1Q86Y22 540 aaPredicted RBP8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 WDR12Q9GZL7 423 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 GALNT8Q9NY28 637 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 LGALS16A8MUM7 142 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 CLPTM1O96005 669 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 PLCG2P16885 1265 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 PAPD7Q5XG87 772 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 AENQ8WTP8 325 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 EBF2Q9HAK2 575 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 COPRSQ9NQ92 184 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 CCPG1Q9ULG6 757 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 GPC6Q9Y625 555 aaPredicted RBP8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 TMEM131LA2VDJ0 1609 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 STK36Q9NRP7 1315 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 PNMA8CA0A1B0GUJ8 204 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 PIK3CDO00329 1044 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 NLRP11P59045 1033 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 SNX17Q15036 470 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 UBE2Q1Q7Z7E8 422 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 FBXO28Q9NVF7 368 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 MYO5AQ9Y4I1 1855 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 RICTORQ6R327 1708 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 MGRN1O60291 552 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 MRPS15P82914 257 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 AFG1LQ8WV93 481 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 BORCS5Q969J3 196 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 ABHD10Q9NUJ1 306 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 CROTQ9UKG9 612 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 PCM1Q15154 2024 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 IGSF1Q8N6C5 1336 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 PLEKHG3A1L390 1219 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 MMP1P03956 469 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 MYL4P12829 197 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 LONP1P36776 959 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 TXKP42681 527 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 NDNQ99608 321 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 VPS45Q9NRW7 570 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 FLT3P36888 993 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 PMS2P54278 862 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 ANGPT1Q15389 498 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 NLRP3Q96P20 1036 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 TUBGCP2Q9BSJ2 902 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 MRPL44Q9H9J2 332 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 SAMSN1Q9NSI8 373 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 ATP6V1HQ9UI12 483 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 TXNDC9O14530 226 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 TOM1L1O75674 476 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 GCNT3O95395 438 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 ATP1A3P13637 1013 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 SYCE2Q6PIF2 218 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 TUBGCP3Q96CW5 907 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 CNOT7Q9UIV1 285 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 CDK5RAP2Q96SN8 1893 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 A0A1W2PQJ5 194 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 SPOPO43791 374 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 DKC1O60832 514 aaKnown RBP eCLIP8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 PRDM1O75626 825 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 PICALMQ13492 652 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 STAT4Q14765 748 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 ST13P5Q8NFI4 369 aaPredicted RBP8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 WDR24Q96S15 920 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 ZCCHC17Q9NP64 241 aaKnown RBP8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 EURLQ9NYK6 297 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 IL20Q9NYY1 176 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 TBC1D7Q9P0N9 293 aa8.01□□□□□ -1.13
SYNPO2-202ENST00000429713 HAUS5O94927 633 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 PDHA1P08559 390 aa8□□□□□ -1.13
SYNPO2-202ENST00000429713 CXCR5P32302 372 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms