RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 RTN4RL1Q86UN2 441 aaPredicted RBP24.66■■□□□ 1.54
PTPN18-205ENST00000428843 ZBTB8OSQ8IWT0 167 aa24.66■■□□□ 1.54
PTPN18-205ENST00000428843 CEP57L1Q8IYX8 460 aa24.66■■□□□ 1.54
PTPN18-205ENST00000428843 TMEM87AQ8NBN3 555 aa24.66■■□□□ 1.54
PTPN18-205ENST00000428843 LINC01599Q8WXQ3 324 aa24.66■■□□□ 1.54
PTPN18-205ENST00000428843 C2orf40Q9H1Z8 148 aa24.66■■□□□ 1.54
PTPN18-205ENST00000428843 SLC4A7Q9Y6M7 1214 aa24.66■■□□□ 1.54
PTPN18-205ENST00000428843 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.65■■□□□ 1.54
PTPN18-205ENST00000428843 CCDC169A6NNP5 214 aa24.65■■□□□ 1.54
PTPN18-205ENST00000428843 ENPP3O14638 875 aa24.65■■□□□ 1.54
PTPN18-205ENST00000428843 TBCAO75347 108 aaKnown RBP24.65■■□□□ 1.54
PTPN18-205ENST00000428843 FAM13AO94988 1023 aa24.65■■□□□ 1.54
PTPN18-205ENST00000428843 SLFN14P0C7P3 912 aa24.65■■□□□ 1.54
PTPN18-205ENST00000428843 KCNJ6P48051 423 aa24.65■■□□□ 1.54
PTPN18-205ENST00000428843 ZNF131P52739 623 aa24.65■■□□□ 1.54
PTPN18-205ENST00000428843 DEFB103AP81534 67 aa24.65■■□□□ 1.54
PTPN18-205ENST00000428843 LONRF3Q496Y0 759 aa24.65■■□□□ 1.54
PTPN18-205ENST00000428843 DNAJC19Q96DA6 116 aa24.65■■□□□ 1.54
PTPN18-205ENST00000428843 LRRC27Q9C0I9 530 aa24.65■■□□□ 1.54
PTPN18-205ENST00000428843 ZHX3Q9H4I2 956 aa24.65■■□□□ 1.54
PTPN18-205ENST00000428843 USP25Q9UHP3 1055 aa24.65■■□□□ 1.54
PTPN18-205ENST00000428843 AMPD3Q01432 767 aa24.64■■□□□ 1.54
PTPN18-205ENST00000428843 DSC3Q14574 896 aa24.64■■□□□ 1.54
PTPN18-205ENST00000428843 CLEC17AQ6ZS10 378 aa24.64■■□□□ 1.54
PTPN18-205ENST00000428843 MYCT1Q8N699 235 aa24.64■■□□□ 1.54
PTPN18-205ENST00000428843 ADAM2Q99965 735 aa24.64■■□□□ 1.54
PTPN18-205ENST00000428843 TSPYL2Q9H2G4 693 aaPredicted RBP24.64■■□□□ 1.54
PTPN18-205ENST00000428843 PARVGQ9HBI0 331 aa24.64■■□□□ 1.54
PTPN18-205ENST00000428843 KMT5AQ9NQR1 393 aa24.64■■□□□ 1.54
PTPN18-205ENST00000428843 LARSQ9P2J5 1176 aaKnown RBP24.64■■□□□ 1.54
PTPN18-205ENST00000428843 DENND3A2RUS2 1198 aa24.63■■□□□ 1.53
PTPN18-205ENST00000428843 GADD45BO75293 160 aaPredicted RBP24.63■■□□□ 1.53
PTPN18-205ENST00000428843 ERLIN2O94905 339 aa24.63■■□□□ 1.53
PTPN18-205ENST00000428843 AMHR2Q16671 573 aa24.63■■□□□ 1.53
PTPN18-205ENST00000428843 FAM43BQ6ZT52 329 aaPredicted RBP24.63■■□□□ 1.53
PTPN18-205ENST00000428843 SPIRE2Q8WWL2 714 aa24.63■■□□□ 1.53
PTPN18-205ENST00000428843 NTPCRQ9BSD7 190 aaKnown RBP24.63■■□□□ 1.53
PTPN18-205ENST00000428843 CCDC113Q9H0I3 377 aa24.63■■□□□ 1.53
PTPN18-205ENST00000428843 AGPAT5Q9NUQ2 364 aa24.63■■□□□ 1.53
PTPN18-205ENST00000428843 PIN4Q9Y237 131 aaKnown RBP24.63■■□□□ 1.53
PTPN18-205ENST00000428843 SLC16A4O15374 487 aa24.62■■□□□ 1.53
PTPN18-205ENST00000428843 TSPAN1O60635 241 aa24.62■■□□□ 1.53
PTPN18-205ENST00000428843 ZNF202O95125 648 aa24.62■■□□□ 1.53
PTPN18-205ENST00000428843 AMHP03971 560 aa24.62■■□□□ 1.53
PTPN18-205ENST00000428843 ZSCAN20P17040 1043 aaPredicted RBP24.62■■□□□ 1.53
PTPN18-205ENST00000428843 AFMP43652 599 aa24.62■■□□□ 1.53
PTPN18-205ENST00000428843 PCBP1Q15365 356 aaKnown RBP eCLIP24.62■■□□□ 1.53
PTPN18-205ENST00000428843 GRAMD1CQ8IYS0 662 aa24.62■■□□□ 1.53
PTPN18-205ENST00000428843 SLC9A7Q96T83 725 aa24.62■■□□□ 1.53
PTPN18-205ENST00000428843 C7orf25Q9BPX7 421 aa24.62■■□□□ 1.53
PTPN18-205ENST00000428843 TRIM9Q9C026 710 aa24.62■■□□□ 1.53
PTPN18-205ENST00000428843 FZD8Q9H461 694 aa24.62■■□□□ 1.53
PTPN18-205ENST00000428843 CHST12Q9NRB3 414 aa24.62■■□□□ 1.53
PTPN18-205ENST00000428843 RGS18Q9NS28 235 aa24.62■■□□□ 1.53
PTPN18-205ENST00000428843 ARHGAP28Q9P2N2 729 aa24.62■■□□□ 1.53
PTPN18-205ENST00000428843 KCNG1Q9UIX4 513 aa24.62■■□□□ 1.53
PTPN18-205ENST00000428843 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.61■■□□□ 1.53
PTPN18-205ENST00000428843 IDEP14735 1019 aa24.61■■□□□ 1.53
PTPN18-205ENST00000428843 ATP2A2P16615 1042 aaKnown RBP24.61■■□□□ 1.53
PTPN18-205ENST00000428843 LIG1P18858 919 aa24.61■■□□□ 1.53
PTPN18-205ENST00000428843 EFNA5P52803 228 aa24.61■■□□□ 1.53
PTPN18-205ENST00000428843 SMTNP53814 917 aa24.61■■□□□ 1.53
PTPN18-205ENST00000428843 MAPK6Q16659 721 aa24.61■■□□□ 1.53
PTPN18-205ENST00000428843 FAM187BQ17R55 369 aa24.61■■□□□ 1.53
PTPN18-205ENST00000428843 FAM109BQ6ICB4 259 aaPredicted RBP24.61■■□□□ 1.53
PTPN18-205ENST00000428843 PPP4R3CPQ6ZMV5 832 aa24.61■■□□□ 1.53
PTPN18-205ENST00000428843 TMCO2Q7Z6W1 182 aaPredicted RBP24.61■■□□□ 1.53
PTPN18-205ENST00000428843 MYOCDQ8IZQ8 938 aa24.61■■□□□ 1.53
PTPN18-205ENST00000428843 FMR1NBQ8N0W7 255 aaPredicted RBP24.61■■□□□ 1.53
PTPN18-205ENST00000428843 PHOSPHO2Q8TCD6 241 aa24.61■■□□□ 1.53
PTPN18-205ENST00000428843 PAGE5Q96GU1 130 aa24.61■■□□□ 1.53
PTPN18-205ENST00000428843 PRMT7Q9NVM4 692 aaPredicted RBP24.61■■□□□ 1.53
PTPN18-205ENST00000428843 TTC3P53804 2025 aa24.61■■□□□ 1.53
PTPN18-205ENST00000428843 B4GALT5O43286 388 aa24.6■■□□□ 1.53
PTPN18-205ENST00000428843 PRKCBP05771 671 aa24.6■■□□□ 1.53
PTPN18-205ENST00000428843 CASP1P29466 404 aa24.6■■□□□ 1.53
PTPN18-205ENST00000428843 HOXA11P31270 313 aaPredicted RBP24.6■■□□□ 1.53
PTPN18-205ENST00000428843 NCKAP1LP55160 1127 aa24.6■■□□□ 1.53
PTPN18-205ENST00000428843 CNNM4Q6P4Q7 775 aa24.6■■□□□ 1.53
PTPN18-205ENST00000428843 KRBA2Q6ZNG9 492 aa24.6■■□□□ 1.53
PTPN18-205ENST00000428843 SFR1Q86XK3 245 aa24.6■■□□□ 1.53
PTPN18-205ENST00000428843 TMEM161BQ8NDZ6 487 aa24.6■■□□□ 1.53
PTPN18-205ENST00000428843 ENGASEQ8NFI3 743 aa24.6■■□□□ 1.53
PTPN18-205ENST00000428843 CPB2Q96IY4 423 aa24.6■■□□□ 1.53
PTPN18-205ENST00000428843 BLZF1Q9H2G9 400 aa24.6■■□□□ 1.53
PTPN18-205ENST00000428843 TMEM134Q9H6X4 195 aa24.6■■□□□ 1.53
PTPN18-205ENST00000428843 C1orf112Q9NSG2 853 aa24.6■■□□□ 1.53
PTPN18-205ENST00000428843 PANK4Q9NVE7 773 aa24.6■■□□□ 1.53
PTPN18-205ENST00000428843 PHLPP2Q6ZVD8 1323 aa24.6■■□□□ 1.53
PTPN18-205ENST00000428843 RANBP2P49792 3224 aaKnown RBP24.59■■□□□ 1.53
PTPN18-205ENST00000428843 FRMD3A2A2Y4 597 aa24.59■■□□□ 1.53
PTPN18-205ENST00000428843 GRXCR1A8MXD5 290 aa24.59■■□□□ 1.53
PTPN18-205ENST00000428843 C9IYK1 514 aa24.59■■□□□ 1.53
PTPN18-205ENST00000428843 K7ERI5 159 aa24.59■■□□□ 1.53
PTPN18-205ENST00000428843 TRAK2O60296 914 aa24.59■■□□□ 1.53
PTPN18-205ENST00000428843 PRPF40AO75400 957 aaKnown RBP24.59■■□□□ 1.53
PTPN18-205ENST00000428843 GAP43P17677 238 aa24.59■■□□□ 1.53
PTPN18-205ENST00000428843 ARF4P18085 180 aaPredicted RBP24.59■■□□□ 1.53
PTPN18-205ENST00000428843 AXLP30530 894 aa24.59■■□□□ 1.53
PTPN18-205ENST00000428843 ASIC1P78348 528 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms