RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 K7ERI5 159 aa16.08■□□□□ 0.16
SGCE-204ENST00000428696 SLC16A4O15374 487 aa16.08■□□□□ 0.16
SGCE-204ENST00000428696 EFCAB14O75071 495 aa16.08■□□□□ 0.16
SGCE-204ENST00000428696 NAMPTP43490 491 aa16.08■□□□□ 0.16
SGCE-204ENST00000428696 NPTX2P47972 431 aa16.08■□□□□ 0.16
SGCE-204ENST00000428696 SMTNP53814 917 aa16.08■□□□□ 0.16
SGCE-204ENST00000428696 WDR5P61964 334 aaKnown RBP16.08■□□□□ 0.16
SGCE-204ENST00000428696 DEFB103AP81534 67 aa16.08■□□□□ 0.16
SGCE-204ENST00000428696 AMPD3Q01432 767 aa16.08■□□□□ 0.16
SGCE-204ENST00000428696 TWF2Q6IBS0 349 aaKnown RBP16.08■□□□□ 0.16
SGCE-204ENST00000428696 DAW1Q8N136 415 aa16.08■□□□□ 0.16
SGCE-204ENST00000428696 PYM1Q9BRP8 204 aaKnown RBP16.08■□□□□ 0.16
SGCE-204ENST00000428696 LRRC27Q9C0I9 530 aa16.08■□□□□ 0.16
SGCE-204ENST00000428696 PRO3102Q9H379 93 aa16.08■□□□□ 0.16
SGCE-204ENST00000428696 TMX1Q9H3N1 280 aa16.08■□□□□ 0.16
SGCE-204ENST00000428696 A0A1W2PQ27 194 aa16.07■□□□□ 0.16
SGCE-204ENST00000428696 A0A1W2PQ64 194 aa16.07■□□□□ 0.16
SGCE-204ENST00000428696 A0A1W2PQD8 194 aa16.07■□□□□ 0.16
SGCE-204ENST00000428696 MGEA5O60502 916 aa16.07■□□□□ 0.16
SGCE-204ENST00000428696 PRPF40AO75400 957 aaKnown RBP16.07■□□□□ 0.16
SGCE-204ENST00000428696 PLS3P13797 630 aa16.07■□□□□ 0.16
SGCE-204ENST00000428696 RABGGTBP53611 331 aa16.07■□□□□ 0.16
SGCE-204ENST00000428696 LONRF3Q496Y0 759 aa16.07■□□□□ 0.16
SGCE-204ENST00000428696 FAM109BQ6ICB4 259 aaPredicted RBP16.07■□□□□ 0.16
SGCE-204ENST00000428696 RTN4RL1Q86UN2 441 aaPredicted RBP16.07■□□□□ 0.16
SGCE-204ENST00000428696 GRAMD1CQ8IYS0 662 aa16.07■□□□□ 0.16
SGCE-204ENST00000428696 CPB2Q96IY4 423 aa16.07■□□□□ 0.16
SGCE-204ENST00000428696 C2orf40Q9H1Z8 148 aa16.07■□□□□ 0.16
SGCE-204ENST00000428696 CUEDC2Q9H467 287 aa16.07■□□□□ 0.16
SGCE-204ENST00000428696 GOLPH3LQ9H4A5 285 aa16.07■□□□□ 0.16
SGCE-204ENST00000428696 PARVGQ9HBI0 331 aa16.07■□□□□ 0.16
SGCE-204ENST00000428696 TBC1D7Q9P0N9 293 aa16.07■□□□□ 0.16
SGCE-204ENST00000428696 LARSQ9P2J5 1176 aaKnown RBP16.07■□□□□ 0.16
SGCE-204ENST00000428696 LRFN2Q9ULH4 789 aa16.07■□□□□ 0.16
SGCE-204ENST00000428696 USP20Q9Y2K6 914 aa16.07■□□□□ 0.16
SGCE-204ENST00000428696 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.06■□□□□ 0.16
SGCE-204ENST00000428696 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.06■□□□□ 0.16
SGCE-204ENST00000428696 MBTD1Q05BQ5 628 aa16.06■□□□□ 0.16
SGCE-204ENST00000428696 POU5F1BQ06416 359 aa16.06■□□□□ 0.16
SGCE-204ENST00000428696 MAPK7Q13164 816 aa16.06■□□□□ 0.16
SGCE-204ENST00000428696 E2F4Q16254 413 aa16.06■□□□□ 0.16
SGCE-204ENST00000428696 MAPK6Q16659 721 aa16.06■□□□□ 0.16
SGCE-204ENST00000428696 CNNM3Q8NE01 707 aa16.06■□□□□ 0.16
SGCE-204ENST00000428696 BLZF1Q9H2G9 400 aa16.06■□□□□ 0.16
SGCE-204ENST00000428696 KCNG1Q9UIX4 513 aa16.06■□□□□ 0.16
SGCE-204ENST00000428696 ODF2LQ9ULJ1 636 aa16.06■□□□□ 0.16
SGCE-204ENST00000428696 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.05■□□□□ 0.16
SGCE-204ENST00000428696 B4GALT5O43286 388 aa16.05■□□□□ 0.16
SGCE-204ENST00000428696 TLL1O43897 1013 aa16.05■□□□□ 0.16
SGCE-204ENST00000428696 GADD45BO75293 160 aaPredicted RBP16.05■□□□□ 0.16
SGCE-204ENST00000428696 SLFN14P0C7P3 912 aa16.05■□□□□ 0.16
SGCE-204ENST00000428696 CASP1P29466 404 aa16.05■□□□□ 0.16
SGCE-204ENST00000428696 EFNA5P52803 228 aa16.05■□□□□ 0.16
SGCE-204ENST00000428696 ASIC1P78348 528 aa16.05■□□□□ 0.16
SGCE-204ENST00000428696 STRN3Q13033 797 aa16.05■□□□□ 0.16
SGCE-204ENST00000428696 PRPF4BQ13523 1007 aaKnown RBP16.05■□□□□ 0.16
SGCE-204ENST00000428696 HERC4Q5GLZ8 1057 aaPredicted RBP16.05■□□□□ 0.16
SGCE-204ENST00000428696 CDR2LQ86X02 465 aaPredicted RBP16.05■□□□□ 0.16
SGCE-204ENST00000428696 HERC6Q8IVU3 1022 aa16.05■□□□□ 0.16
SGCE-204ENST00000428696 TNMDQ9H2S6 317 aa16.05■□□□□ 0.16
SGCE-204ENST00000428696 C17orf75Q9HAS0 396 aa16.05■□□□□ 0.16
SGCE-204ENST00000428696 PANK4Q9NVE7 773 aa16.05■□□□□ 0.16
SGCE-204ENST00000428696 PCDHB7Q9Y5E2 793 aa16.05■□□□□ 0.16
SGCE-204ENST00000428696 TET1Q8NFU7 2136 aa16.05■□□□□ 0.16
SGCE-204ENST00000428696 A0A1W2PPC1 479 aa16.04■□□□□ 0.16
SGCE-204ENST00000428696 TULP1O00294 542 aaPredicted RBP16.04■□□□□ 0.16
SGCE-204ENST00000428696 TRAK2O60296 914 aa16.04■□□□□ 0.16
SGCE-204ENST00000428696 ZNF202O95125 648 aa16.04■□□□□ 0.16
SGCE-204ENST00000428696 PRKCBP05771 671 aa16.04■□□□□ 0.16
SGCE-204ENST00000428696 HABP4Q5JVS0 413 aaKnown RBP16.04■□□□□ 0.16
SGCE-204ENST00000428696 SLC24A5Q71RS6 500 aa16.04■□□□□ 0.16
SGCE-204ENST00000428696 FAM178BQ8IXR5 827 aa16.04■□□□□ 0.16
SGCE-204ENST00000428696 CCDC65Q8IXS2 484 aa16.04■□□□□ 0.16
SGCE-204ENST00000428696 PAGE5Q96GU1 130 aa16.04■□□□□ 0.16
SGCE-204ENST00000428696 SLC9A7Q96T83 725 aa16.04■□□□□ 0.16
SGCE-204ENST00000428696 YME1L1Q96TA2 773 aa16.04■□□□□ 0.16
SGCE-204ENST00000428696 TSPYL2Q9H2G4 693 aaPredicted RBP16.04■□□□□ 0.16
SGCE-204ENST00000428696 MRPL44Q9H9J2 332 aaKnown RBP16.04■□□□□ 0.16
SGCE-204ENST00000428696 CHST12Q9NRB3 414 aa16.04■□□□□ 0.16
SGCE-204ENST00000428696 RGS18Q9NS28 235 aa16.04■□□□□ 0.16
SGCE-204ENST00000428696 PRMT7Q9NVM4 692 aaPredicted RBP16.04■□□□□ 0.16
SGCE-204ENST00000428696 DACT1Q9NYF0 836 aa16.04■□□□□ 0.16
SGCE-204ENST00000428696 MSRAQ9UJ68 235 aa16.04■□□□□ 0.16
SGCE-204ENST00000428696 ARID2Q68CP9 1835 aa16.04■□□□□ 0.16
SGCE-204ENST00000428696 TANC1Q9C0D5 1861 aa16.04■□□□□ 0.16
SGCE-204ENST00000428696 K7ENM7 598 aa16.03■□□□□ 0.16
SGCE-204ENST00000428696 TSPAN1O60635 241 aa16.03■□□□□ 0.16
SGCE-204ENST00000428696 MYOGP15173 224 aa16.03■□□□□ 0.16
SGCE-204ENST00000428696 NMT1P30419 496 aaKnown RBP16.03■□□□□ 0.16
SGCE-204ENST00000428696 MATR3P43243 847 aaKnown RBP eCLIP16.03■□□□□ 0.162e-7■■■■□ 22.3
SGCE-204ENST00000428696 RASIP1Q5U651 963 aa16.03■□□□□ 0.16
SGCE-204ENST00000428696 HAUS6Q7Z4H7 955 aa16.03■□□□□ 0.16
SGCE-204ENST00000428696 SFR1Q86XK3 245 aa16.03■□□□□ 0.16
SGCE-204ENST00000428696 PHOSPHO2Q8TCD6 241 aa16.03■□□□□ 0.16
SGCE-204ENST00000428696 LINC01599Q8WXQ3 324 aa16.03■□□□□ 0.16
SGCE-204ENST00000428696 BICD1Q96G01 975 aa16.03■□□□□ 0.16
SGCE-204ENST00000428696 GBP4Q96PP9 640 aa16.03■□□□□ 0.16
SGCE-204ENST00000428696 TCHPQ9BT92 498 aa16.03■□□□□ 0.16
SGCE-204ENST00000428696 NFKBIZQ9BYH8 718 aa16.03■□□□□ 0.16
SGCE-204ENST00000428696 TRIM6Q9C030 488 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms