RNA–Protein interactions for RNA: ENST00000428482.5

HDLBP-216, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-216ENST00000428482 GCOM2Q9BZD3 368 aaPredicted RBP11.38□□□□□ -0.59
HDLBP-216ENST00000428482 NXF3Q9H4D5 531 aaKnown RBP11.38□□□□□ -0.59
HDLBP-216ENST00000428482 TUFT1Q9NNX1 390 aa11.38□□□□□ -0.59
HDLBP-216ENST00000428482 C1orf112Q9NSG2 853 aa11.38□□□□□ -0.59
HDLBP-216ENST00000428482 CACNG4Q9UBN1 327 aa11.38□□□□□ -0.59
HDLBP-216ENST00000428482 LRFN2Q9ULH4 789 aa11.38□□□□□ -0.59
HDLBP-216ENST00000428482 INPP5FQ9Y2H2 1132 aa11.38□□□□□ -0.59
HDLBP-216ENST00000428482 TTC28Q96AY4 2481 aa11.38□□□□□ -0.59
HDLBP-216ENST00000428482 ANK1P16157 1881 aa11.38□□□□□ -0.59
HDLBP-216ENST00000428482 C2orf16Q68DN1 1984 aa11.37□□□□□ -0.59
HDLBP-216ENST00000428482 C5orf67F2Z3F1 127 aa11.37□□□□□ -0.59
HDLBP-216ENST00000428482 F8W810 466 aa11.37□□□□□ -0.59
HDLBP-216ENST00000428482 H3BNC9 293 aa11.37□□□□□ -0.59
HDLBP-216ENST00000428482 LINC01565O15544 149 aa11.37□□□□□ -0.59
HDLBP-216ENST00000428482 GTPBP6O43824 516 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-216ENST00000428482 HOXA11P31270 313 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-216ENST00000428482 ARL2P36404 184 aa11.37□□□□□ -0.59
HDLBP-216ENST00000428482 PHKA2P46019 1235 aa11.37□□□□□ -0.59
HDLBP-216ENST00000428482 CACNB1Q02641 598 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-216ENST00000428482 MAPK7Q13164 816 aa11.37□□□□□ -0.59
HDLBP-216ENST00000428482 ORC2Q13416 577 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-216ENST00000428482 PKP1Q13835 747 aa11.37□□□□□ -0.59
HDLBP-216ENST00000428482 ZRSR1Q15695 479 aaKnown RBP11.37□□□□□ -0.59
HDLBP-216ENST00000428482 FOXD4L5Q5VV16 416 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-216ENST00000428482 LARP1BQ659C4 914 aaKnown RBP11.37□□□□□ -0.59
HDLBP-216ENST00000428482 TWF2Q6IBS0 349 aaKnown RBP11.37□□□□□ -0.59
HDLBP-216ENST00000428482 SLC24A5Q71RS6 500 aa11.37□□□□□ -0.59
HDLBP-216ENST00000428482 DAW1Q8N136 415 aa11.37□□□□□ -0.59
HDLBP-216ENST00000428482 KLHL23Q8NBE8 558 aa11.37□□□□□ -0.59
HDLBP-216ENST00000428482 COLGALT1Q8NBJ5 622 aa11.37□□□□□ -0.59
HDLBP-216ENST00000428482 FEZF2Q8TBJ5 459 aa11.37□□□□□ -0.59
HDLBP-216ENST00000428482 FOXD4L4Q8WXT5 416 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-216ENST00000428482 CXCL16Q9H2A7 254 aa11.37□□□□□ -0.59
HDLBP-216ENST00000428482 BHMT2Q9H2M3 363 aa11.37□□□□□ -0.59
HDLBP-216ENST00000428482 ANKEF1Q9NU02 776 aa11.37□□□□□ -0.59
HDLBP-216ENST00000428482 FAM105AQ9NUU6 356 aa11.37□□□□□ -0.59
HDLBP-216ENST00000428482 TMEM161AQ9NX61 479 aa11.37□□□□□ -0.59
HDLBP-216ENST00000428482 MTMR6Q9Y217 621 aa11.37□□□□□ -0.59
HDLBP-216ENST00000428482 HES2Q9Y543 173 aa11.37□□□□□ -0.59
HDLBP-216ENST00000428482 CLIC4Q9Y696 253 aa11.37□□□□□ -0.59
HDLBP-216ENST00000428482 CITO14578 2027 aa11.36□□□□□ -0.59
HDLBP-216ENST00000428482 ARHGEF35A5YM69 484 aa11.36□□□□□ -0.59
HDLBP-216ENST00000428482 LRRIQ4A6NIV6 560 aa11.36□□□□□ -0.59
HDLBP-216ENST00000428482 INO80B-WBP1J3KQ70 363 aa11.36□□□□□ -0.59
HDLBP-216ENST00000428482 DKC1O60832 514 aaKnown RBP eCLIP11.36□□□□□ -0.59
HDLBP-216ENST00000428482 TBX10O75333 385 aa11.36□□□□□ -0.59
HDLBP-216ENST00000428482 DGAT1O75907 488 aa11.36□□□□□ -0.59
HDLBP-216ENST00000428482 PDCP20941 246 aa11.36□□□□□ -0.59
HDLBP-216ENST00000428482 SYT1P21579 422 aa11.36□□□□□ -0.59
HDLBP-216ENST00000428482 RPA1P27694 616 aa11.36□□□□□ -0.59
HDLBP-216ENST00000428482 HOXD11P31277 338 aaPredicted RBP11.36□□□□□ -0.59
HDLBP-216ENST00000428482 PTENP60484 403 aa11.36□□□□□ -0.59
HDLBP-216ENST00000428482 RAD51AP2Q09MP3 1159 aa11.36□□□□□ -0.59
HDLBP-216ENST00000428482 TMEM119Q4V9L6 283 aa11.36□□□□□ -0.59
HDLBP-216ENST00000428482 HAUS3Q68CZ6 603 aa11.36□□□□□ -0.59
HDLBP-216ENST00000428482 CDCA2Q69YH5 1023 aaPredicted RBP11.36□□□□□ -0.59
HDLBP-216ENST00000428482 PADI6Q6TGC4 694 aa11.36□□□□□ -0.59
HDLBP-216ENST00000428482 LRRC43Q8N309 656 aa11.36□□□□□ -0.59
HDLBP-216ENST00000428482 TMEM130Q8N3G9 435 aa11.36□□□□□ -0.59
HDLBP-216ENST00000428482 SPRYD3Q8NCJ5 442 aa11.36□□□□□ -0.59
HDLBP-216ENST00000428482 SMG8Q8ND04 991 aaKnown RBP11.36□□□□□ -0.59
HDLBP-216ENST00000428482 MRPL38Q96DV4 380 aaKnown RBP11.36□□□□□ -0.59
HDLBP-216ENST00000428482 CHAMP1Q96JM3 812 aa11.36□□□□□ -0.59
HDLBP-216ENST00000428482 APOL6Q9BWW8 343 aa11.36□□□□□ -0.59
HDLBP-216ENST00000428482 INO80BQ9C086 356 aaPredicted RBP11.36□□□□□ -0.59
HDLBP-216ENST00000428482 TYW1Q9NV66 732 aaKnown RBP11.36□□□□□ -0.59
HDLBP-216ENST00000428482 LRWD1Q9UFC0 647 aa11.36□□□□□ -0.59
HDLBP-216ENST00000428482 KIAA1024Q9UPX6 916 aa11.36□□□□□ -0.59
HDLBP-216ENST00000428482 PCDHB7Q9Y5E2 793 aa11.36□□□□□ -0.59
HDLBP-216ENST00000428482 NPHP3-ACAD11A0A0J9YXS1 232 aa11.35□□□□□ -0.59
HDLBP-216ENST00000428482 NT5C1B-RDH14C9J2C7 533 aa11.35□□□□□ -0.59
HDLBP-216ENST00000428482 H3BQ06 376 aaPredicted RBP11.35□□□□□ -0.59
HDLBP-216ENST00000428482 STAG3L1P0CL83 205 aa11.35□□□□□ -0.59
HDLBP-216ENST00000428482 ARF4P18085 180 aaPredicted RBP11.35□□□□□ -0.59
HDLBP-216ENST00000428482 LIG1P18858 919 aa11.35□□□□□ -0.59
HDLBP-216ENST00000428482 POU3F3P20264 500 aaPredicted RBP11.35□□□□□ -0.59
HDLBP-216ENST00000428482 BMPR1AP36894 532 aa11.35□□□□□ -0.59
HDLBP-216ENST00000428482 DNM2P50570 870 aa11.35□□□□□ -0.59
HDLBP-216ENST00000428482 FAM189BP81408 668 aa11.35□□□□□ -0.59
HDLBP-216ENST00000428482 DLX2Q07687 328 aaPredicted RBP11.35□□□□□ -0.59
HDLBP-216ENST00000428482 HYAL1Q12794 435 aa11.35□□□□□ -0.59
HDLBP-216ENST00000428482 SF3A1Q15459 793 aaKnown RBP11.35□□□□□ -0.59
HDLBP-216ENST00000428482 CLUL1Q15846 466 aa11.35□□□□□ -0.59
HDLBP-216ENST00000428482 TIGD5Q53EQ6 642 aa11.35□□□□□ -0.59
HDLBP-216ENST00000428482 SPECC1Q5M775 1068 aa11.35□□□□□ -0.59
HDLBP-216ENST00000428482 SPOUT1Q5T280 376 aaKnown RBP11.35□□□□□ -0.59
HDLBP-216ENST00000428482 PLPP4Q5VZY2 271 aa11.35□□□□□ -0.59
HDLBP-216ENST00000428482 EEF1DP3Q658K8 133 aa11.35□□□□□ -0.59
HDLBP-216ENST00000428482 AGMOQ6ZNB7 445 aa11.35□□□□□ -0.59
HDLBP-216ENST00000428482 USP49Q70CQ1 688 aa11.35□□□□□ -0.59
HDLBP-216ENST00000428482 VN1R2Q8NFZ6 395 aa11.35□□□□□ -0.59
HDLBP-216ENST00000428482 POF1BQ8WVV4 589 aa11.35□□□□□ -0.59
HDLBP-216ENST00000428482 SAMD11Q96NU1 681 aa11.35□□□□□ -0.59
HDLBP-216ENST00000428482 JPH2Q9BR39 696 aaPredicted RBP11.35□□□□□ -0.59
HDLBP-216ENST00000428482 C11orf84Q9BUA3 381 aaPredicted RBP11.35□□□□□ -0.59
HDLBP-216ENST00000428482 VN1R3Q9BXE9 311 aa11.35□□□□□ -0.59
HDLBP-216ENST00000428482 TMEM117Q9H0C3 514 aa11.35□□□□□ -0.59
HDLBP-216ENST00000428482 CCDC113Q9H0I3 377 aa11.35□□□□□ -0.59
HDLBP-216ENST00000428482 RNF39Q9H2S5 420 aa11.35□□□□□ -0.59
HDLBP-216ENST00000428482 DNAJB4Q9UDY4 337 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms