RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 NR2E1Q9Y466 385 aa17.29■□□□□ 0.36
C9orf3-206ENST00000428313 GLI3P10071 1580 aa17.29■□□□□ 0.36
C9orf3-206ENST00000428313 MAGEB2O15479 319 aa17.28■□□□□ 0.36
C9orf3-206ENST00000428313 PTGIRP43119 386 aa17.28■□□□□ 0.36
C9orf3-206ENST00000428313 SESN3P58005 492 aa17.28■□□□□ 0.36
C9orf3-206ENST00000428313 ARID5AQ03989 594 aa17.28■□□□□ 0.36
C9orf3-206ENST00000428313 ALKBH5Q6P6C2 394 aaKnown RBP17.28■□□□□ 0.36
C9orf3-206ENST00000428313 ZNF571Q7Z3V5 609 aaPredicted RBP17.28■□□□□ 0.36
C9orf3-206ENST00000428313 IRGQQ8WZA9 623 aa17.28■□□□□ 0.36
C9orf3-206ENST00000428313 LENG1Q96BZ8 264 aaPredicted RBP17.28■□□□□ 0.36
C9orf3-206ENST00000428313 STX18Q9P2W9 335 aaKnown RBP17.28■□□□□ 0.36
C9orf3-206ENST00000428313 WDR37Q9Y2I8 494 aa17.28■□□□□ 0.36
C9orf3-206ENST00000428313 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.28■□□□□ 0.36
C9orf3-206ENST00000428313 TRPM3Q9HCF6 1732 aaPredicted RBP17.28■□□□□ 0.36
C9orf3-206ENST00000428313 PFASO15067 1338 aa17.28■□□□□ 0.36
C9orf3-206ENST00000428313 TMEM221A6NGB7 291 aa17.28■□□□□ 0.36
C9orf3-206ENST00000428313 OATP04181 439 aa17.28■□□□□ 0.36
C9orf3-206ENST00000428313 HSPA6P17066 643 aa17.28■□□□□ 0.36
C9orf3-206ENST00000428313 SULT2A1Q06520 285 aa17.28■□□□□ 0.36
C9orf3-206ENST00000428313 ZC2HC1CQ53FD0 456 aaPredicted RBP17.28■□□□□ 0.36
C9orf3-206ENST00000428313 METTL24Q5JXM2 366 aa17.28■□□□□ 0.36
C9orf3-206ENST00000428313 UBAP2Q5T6F2 1119 aaKnown RBP17.28■□□□□ 0.36
C9orf3-206ENST00000428313 DAB2IPQ5VWQ8 1189 aa17.28■□□□□ 0.36
C9orf3-206ENST00000428313 IRF2BP2Q7Z5L9 587 aa17.28■□□□□ 0.36
C9orf3-206ENST00000428313 UHMK1Q8TAS1 419 aaKnown RBP17.28■□□□□ 0.36
C9orf3-206ENST00000428313 WDR66Q8TBY9 1149 aa17.28■□□□□ 0.36
C9orf3-206ENST00000428313 HPS3Q969F9 1004 aa17.28■□□□□ 0.36
C9orf3-206ENST00000428313 ASCC2Q9H1I8 757 aaPredicted RBP17.28■□□□□ 0.36
C9orf3-206ENST00000428313 TAOK3Q9H2K8 898 aa17.28■□□□□ 0.36
C9orf3-206ENST00000428313 SAR1AQ9NR31 198 aa17.28■□□□□ 0.36
C9orf3-206ENST00000428313 SH3GLB2Q9NR46 395 aa17.28■□□□□ 0.36
C9orf3-206ENST00000428313 NKIRAS1Q9NYS0 192 aa17.28■□□□□ 0.36
C9orf3-206ENST00000428313 ARMCX3Q9UH62 379 aaPredicted RBP17.28■□□□□ 0.36
C9orf3-206ENST00000428313 DDX3YO15523 660 aaKnown RBP17.27■□□□□ 0.36
C9orf3-206ENST00000428313 LGR5O75473 907 aa17.27■□□□□ 0.36
C9orf3-206ENST00000428313 H2AFZP0C0S5 128 aa17.27■□□□□ 0.36
C9orf3-206ENST00000428313 RPL21P46778 160 aaKnown RBP17.27■□□□□ 0.36
C9orf3-206ENST00000428313 MOGSQ13724 837 aa17.27■□□□□ 0.36
C9orf3-206ENST00000428313 PTPROQ16827 1216 aa17.27■□□□□ 0.36
C9orf3-206ENST00000428313 H2AFVQ71UI9 128 aa17.27■□□□□ 0.36
C9orf3-206ENST00000428313 MAGEB6Q8N7X4 407 aa17.27■□□□□ 0.36
C9orf3-206ENST00000428313 GLG1Q92896 1179 aa17.27■□□□□ 0.36
C9orf3-206ENST00000428313 CRAMP1Q96RY5 1269 aa17.27■□□□□ 0.36
C9orf3-206ENST00000428313 LZTS2Q9BRK4 669 aa17.27■□□□□ 0.36
C9orf3-206ENST00000428313 NT5C3AQ9H0P0 336 aa17.27■□□□□ 0.36
C9orf3-206ENST00000428313 PCDHA4Q9UN74 947 aa17.27■□□□□ 0.36
C9orf3-206ENST00000428313 FAM205AQ6ZU69 1335 aa17.27■□□□□ 0.35
C9orf3-206ENST00000428313 PHF2O75151 1096 aa17.27■□□□□ 0.35
C9orf3-206ENST00000428313 BRAFP15056 766 aa17.27■□□□□ 0.35
C9orf3-206ENST00000428313 CREB1P16220 341 aa17.27■□□□□ 0.35
C9orf3-206ENST00000428313 CHRNA3P32297 505 aa17.27■□□□□ 0.35
C9orf3-206ENST00000428313 PRKCIP41743 596 aa17.27■□□□□ 0.35
C9orf3-206ENST00000428313 MARSP56192 900 aaKnown RBP17.27■□□□□ 0.35
C9orf3-206ENST00000428313 RTP1P59025 263 aa17.27■□□□□ 0.35
C9orf3-206ENST00000428313 KCTD19Q17RG1 926 aaPredicted RBP17.27■□□□□ 0.35
C9orf3-206ENST00000428313 OTUD6AQ7L8S5 288 aa17.27■□□□□ 0.35
C9orf3-206ENST00000428313 NME8Q8N427 588 aa17.27■□□□□ 0.35
C9orf3-206ENST00000428313 DDX27Q96GQ7 796 aaKnown RBP17.27■□□□□ 0.35
C9orf3-206ENST00000428313 CEP63Q96MT8 703 aa17.27■□□□□ 0.35
C9orf3-206ENST00000428313 PHACTR1Q9C0D0 580 aa17.27■□□□□ 0.35
C9orf3-206ENST00000428313 PCYOX1Q9UHG3 505 aa17.27■□□□□ 0.35
C9orf3-206ENST00000428313 ALS2Q96Q42 1657 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 DUOX1Q9NRD9 1551 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 ADGRA3Q8IWK6 1321 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 ADAMTS3O15072 1205 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 PRKAB2O43741 272 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 ATP9BO43861 1147 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 PSMG1O95456 288 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 GH1P01241 217 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 ITGA2BP08514 1039 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 PABPC4LP0CB38 370 aaKnown RBP17.26■□□□□ 0.35
C9orf3-206ENST00000428313 PHKG2P15735 406 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 FKBP3Q00688 224 aaKnown RBP17.26■□□□□ 0.35
C9orf3-206ENST00000428313 MPP2Q14168 576 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 MARK2Q7KZI7 788 aaKnown RBP17.26■□□□□ 0.35
C9orf3-206ENST00000428313 ART4Q93070 314 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 ERVK-5Q9HDB9 667 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 STK32BQ9NY57 414 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 ACTL7BQ9Y614 415 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 UMODL1Q5DID0 1318 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 CCDC194A0A1B0GVG4 234 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 CAPN9O14815 690 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 TTLL1O95922 423 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 IL9RQ01113 521 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 CDR2Q01850 454 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 RRP1BQ14684 758 aaKnown RBP17.26■□□□□ 0.35
C9orf3-206ENST00000428313 LONRF1Q17RB8 773 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 WDR72Q3MJ13 1102 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 DCAF12L1Q5VU92 463 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 LRRC43Q8N309 656 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 NAT14Q8WUY8 206 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 RAPGEF4Q8WZA2 1011 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 PLA2G12BQ9BX93 195 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 SYNCQ9H7C4 482 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 MLXIPLQ9NP71 852 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 PCDHA3Q9Y5H8 950 aa17.26■□□□□ 0.35
C9orf3-206ENST00000428313 ARAP2Q8WZ64 1704 aa17.25■□□□□ 0.35
C9orf3-206ENST00000428313 M0R2N6 131 aa17.25■□□□□ 0.35
C9orf3-206ENST00000428313 DDX3XO00571 662 aaKnown RBP eCLIP17.25■□□□□ 0.353e-11■■■□□ 16.8
C9orf3-206ENST00000428313 HNRNPRO43390 633 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms