RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 PRR23CQ6ZRP0 262 aa13.56□□□□□ -0.24
DDX39B-208ENST00000428098 TRMT1LQ7Z2T5 733 aaKnown RBP13.56□□□□□ -0.24
DDX39B-208ENST00000428098 CCDC60Q8IWA6 550 aaPredicted RBP13.56□□□□□ -0.24
DDX39B-208ENST00000428098 MAP4K1Q92918 833 aa13.56□□□□□ -0.24
DDX39B-208ENST00000428098 MXRA8Q9BRK3 442 aa13.56□□□□□ -0.24
DDX39B-208ENST00000428098 KRT23Q9C075 422 aa13.56□□□□□ -0.24
DDX39B-208ENST00000428098 GBP3Q9H0R5 595 aa13.56□□□□□ -0.24
DDX39B-208ENST00000428098 PSTPIP2Q9H939 334 aa13.56□□□□□ -0.24
DDX39B-208ENST00000428098 MRPL17Q9NRX2 175 aaKnown RBP13.56□□□□□ -0.24
DDX39B-208ENST00000428098 NFASCO94856 1347 aa13.56□□□□□ -0.24
DDX39B-208ENST00000428098 COL1A2P08123 1366 aa13.56□□□□□ -0.24
DDX39B-208ENST00000428098 LRP3O75074 770 aa13.55□□□□□ -0.24
DDX39B-208ENST00000428098 OFD1O75665 1012 aa13.55□□□□□ -0.24
DDX39B-208ENST00000428098 DDHD2O94830 711 aa13.55□□□□□ -0.24
DDX39B-208ENST00000428098 TARSP26639 723 aaKnown RBP13.55□□□□□ -0.24
DDX39B-208ENST00000428098 AFF1P51825 1210 aaKnown RBP13.55□□□□□ -0.24
DDX39B-208ENST00000428098 PDE1AP54750 535 aa13.55□□□□□ -0.24
DDX39B-208ENST00000428098 PRKCQQ04759 706 aa13.55□□□□□ -0.24
DDX39B-208ENST00000428098 MTAPQ13126 283 aa13.55□□□□□ -0.24
DDX39B-208ENST00000428098 CSRP2Q16527 193 aa13.55□□□□□ -0.24
DDX39B-208ENST00000428098 NOMO2Q5JPE7 1267 aa13.55□□□□□ -0.24
DDX39B-208ENST00000428098 SWSAP1Q6NVH7 229 aa13.55□□□□□ -0.24
DDX39B-208ENST00000428098 GET4Q7L5D6 327 aaPredicted RBP13.55□□□□□ -0.24
DDX39B-208ENST00000428098 LINC01465Q8N7H1 131 aa13.55□□□□□ -0.24
DDX39B-208ENST00000428098 SDF4Q9BRK5 362 aa13.55□□□□□ -0.24
DDX39B-208ENST00000428098 AGO4Q9HCK5 861 aaKnown RBP13.55□□□□□ -0.24
DDX39B-208ENST00000428098 PCDHA6Q9UN73 950 aa13.55□□□□□ -0.24
DDX39B-208ENST00000428098 PCDHA8Q9Y5H6 950 aa13.55□□□□□ -0.24
DDX39B-208ENST00000428098 AKAP13Q12802 2813 aa13.55□□□□□ -0.24
DDX39B-208ENST00000428098 SOBPA7XYQ1 873 aa13.54□□□□□ -0.24
DDX39B-208ENST00000428098 BACH1O14867 736 aa13.54□□□□□ -0.24
DDX39B-208ENST00000428098 DARSP14868 501 aaKnown RBP13.54□□□□□ -0.24
DDX39B-208ENST00000428098 PHKA2P46019 1235 aa13.54□□□□□ -0.24
DDX39B-208ENST00000428098 AK2P54819 239 aa13.54□□□□□ -0.24
DDX39B-208ENST00000428098 PDXDC2PQ6P474 469 aa13.54□□□□□ -0.24
DDX39B-208ENST00000428098 LRSAM1Q6UWE0 723 aa13.54□□□□□ -0.24
DDX39B-208ENST00000428098 CELF5Q8N6W0 485 aaKnown RBP13.54□□□□□ -0.24
DDX39B-208ENST00000428098 KDF1Q8NAX2 398 aaPredicted RBP13.54□□□□□ -0.24
DDX39B-208ENST00000428098 RPS6KC1Q96S38 1066 aa13.54□□□□□ -0.24
DDX39B-208ENST00000428098 MYL10Q9BUA6 226 aa13.54□□□□□ -0.24
DDX39B-208ENST00000428098 FAM126AQ9BYI3 521 aaPredicted RBP13.54□□□□□ -0.24
DDX39B-208ENST00000428098 PIDD1Q9HB75 910 aa13.54□□□□□ -0.24
DDX39B-208ENST00000428098 INPP5FQ9Y2H2 1132 aa13.54□□□□□ -0.24
DDX39B-208ENST00000428098 PCDHB15Q9Y5E8 787 aa13.54□□□□□ -0.24
DDX39B-208ENST00000428098 SDK1Q7Z5N4 2213 aa13.54□□□□□ -0.24
DDX39B-208ENST00000428098 MYH15Q9Y2K3 1946 aa13.53□□□□□ -0.24
DDX39B-208ENST00000428098 DDX39AO00148 427 aaKnown RBP13.53□□□□□ -0.24
DDX39B-208ENST00000428098 HRO43593 1189 aa13.53□□□□□ -0.24
DDX39B-208ENST00000428098 GLUD1P00367 558 aa13.53□□□□□ -0.24
DDX39B-208ENST00000428098 NCLP19338 710 aaKnown RBP13.53□□□□□ -0.24
DDX39B-208ENST00000428098 MAGEA9P43362 315 aa13.53□□□□□ -0.24
DDX39B-208ENST00000428098 RPS9P46781 194 aaKnown RBP13.53□□□□□ -0.24
DDX39B-208ENST00000428098 HNRNPUQ00839 825 aaKnown RBP eCLIP13.53□□□□□ -0.24
DDX39B-208ENST00000428098 RNASELQ05823 741 aaKnown RBP13.53□□□□□ -0.24
DDX39B-208ENST00000428098 MAPK8IP2Q13387 824 aaPredicted RBP13.53□□□□□ -0.24
DDX39B-208ENST00000428098 EFCAB12Q6NXP0 572 aa13.53□□□□□ -0.24
DDX39B-208ENST00000428098 TICAM2Q86XR7 235 aa13.53□□□□□ -0.24
DDX39B-208ENST00000428098 PALB2Q86YC2 1186 aa13.53□□□□□ -0.24
DDX39B-208ENST00000428098 ZNF687Q8N1G0 1237 aa13.53□□□□□ -0.24
DDX39B-208ENST00000428098 LRRC71Q8N4P6 559 aa13.53□□□□□ -0.24
DDX39B-208ENST00000428098 PRKD2Q9BZL6 878 aa13.53□□□□□ -0.24
DDX39B-208ENST00000428098 CNNM2Q9H8M5 875 aa13.53□□□□□ -0.24
DDX39B-208ENST00000428098 RXFP1Q9HBX9 757 aa13.53□□□□□ -0.24
DDX39B-208ENST00000428098 ZNF302Q9NR11 478 aa13.53□□□□□ -0.24
DDX39B-208ENST00000428098 FAM217BQ9NTX9 383 aaPredicted RBP13.53□□□□□ -0.24
DDX39B-208ENST00000428098 RAB23Q9ULC3 237 aa13.53□□□□□ -0.24
DDX39B-208ENST00000428098 AKT3Q9Y243 479 aa13.53□□□□□ -0.24
DDX39B-208ENST00000428098 ITPR1Q14643 2758 aa13.53□□□□□ -0.24
DDX39B-208ENST00000428098 DMXL2Q8TDJ6 3036 aa13.52□□□□□ -0.24
DDX39B-208ENST00000428098 DHX15O43143 795 aaKnown RBP13.52□□□□□ -0.25
DDX39B-208ENST00000428098 GAS2O43903 313 aaKnown RBP13.52□□□□□ -0.25
DDX39B-208ENST00000428098 EFEMP2O95967 443 aa13.52□□□□□ -0.25
DDX39B-208ENST00000428098 ALDH2P05091 517 aa13.52□□□□□ -0.25
DDX39B-208ENST00000428098 ADH1AP07327 375 aa13.52□□□□□ -0.25
DDX39B-208ENST00000428098 SDSP20132 328 aa13.52□□□□□ -0.25
DDX39B-208ENST00000428098 GPC3P51654 580 aa13.52□□□□□ -0.25
DDX39B-208ENST00000428098 NTHL1P78549 312 aa13.52□□□□□ -0.25
DDX39B-208ENST00000428098 IMMTQ16891 758 aaKnown RBP13.52□□□□□ -0.25
DDX39B-208ENST00000428098 FAM160B1Q5W0V3 765 aa13.52□□□□□ -0.25
DDX39B-208ENST00000428098 LILRA6Q6PI73 481 aa13.52□□□□□ -0.25
DDX39B-208ENST00000428098 RSPO2Q6UXX9 243 aaPredicted RBP13.52□□□□□ -0.25
DDX39B-208ENST00000428098 PRR23BQ6ZRT6 265 aa13.52□□□□□ -0.25
DDX39B-208ENST00000428098 DDX1Q92499 740 aaKnown RBP13.52□□□□□ -0.25
DDX39B-208ENST00000428098 NELL2Q99435 816 aa13.52□□□□□ -0.25
DDX39B-208ENST00000428098 RXFP3Q9NSD7 469 aa13.52□□□□□ -0.25
DDX39B-208ENST00000428098 DACT1Q9NYF0 836 aa13.52□□□□□ -0.25
DDX39B-208ENST00000428098 CDH7Q9ULB5 785 aa13.52□□□□□ -0.25
DDX39B-208ENST00000428098 RALGAPA1Q6GYQ0 2036 aa13.52□□□□□ -0.25
DDX39B-208ENST00000428098 F5P12259 2224 aa13.52□□□□□ -0.25
DDX39B-208ENST00000428098 MEIS1O00470 390 aa13.51□□□□□ -0.25
DDX39B-208ENST00000428098 NRP1O14786 923 aa13.51□□□□□ -0.25
DDX39B-208ENST00000428098 ZIC2O95409 532 aaPredicted RBP13.51□□□□□ -0.25
DDX39B-208ENST00000428098 SOD2P04179 222 aa13.51□□□□□ -0.25
DDX39B-208ENST00000428098 FSHRP23945 695 aa13.51□□□□□ -0.25
DDX39B-208ENST00000428098 MFAP1P55081 439 aaKnown RBP13.51□□□□□ -0.25
DDX39B-208ENST00000428098 SRSF5Q13243 272 aaKnown RBP13.51□□□□□ -0.25
DDX39B-208ENST00000428098 GLB1LQ6UWU2 654 aa13.51□□□□□ -0.25
DDX39B-208ENST00000428098 UNQ6494/PRO21346Q6UXR6 183 aa13.51□□□□□ -0.25
DDX39B-208ENST00000428098 TPRG1Q6ZUI0 275 aa13.51□□□□□ -0.25
DDX39B-208ENST00000428098 PHKBQ93100 1093 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms