RNA–Protein interactions for RNA: ENST00000427746.1

HLCS-204, Transcript of holocarboxylase synthetase, humanhuman

TSL 3

Gene HLCS, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-204ENST00000427746 SKIP12755 728 aa21.54■■□□□ 1.04
HLCS-204ENST00000427746 HOXA11P31270 313 aaPredicted RBP21.54■■□□□ 1.04
HLCS-204ENST00000427746 GTF2F1P35269 517 aaKnown RBP eCLIP21.54■■□□□ 1.04
HLCS-204ENST00000427746 ARL2P36404 184 aa21.54■■□□□ 1.04
HLCS-204ENST00000427746 TOB1P50616 345 aaPredicted RBP21.54■■□□□ 1.04
HLCS-204ENST00000427746 PLCB3Q01970 1234 aa21.54■■□□□ 1.04
HLCS-204ENST00000427746 NBR1Q14596 966 aa21.54■■□□□ 1.04
HLCS-204ENST00000427746 ADGRD2Q7Z7M1 963 aa21.54■■□□□ 1.04
HLCS-204ENST00000427746 IFNLR1Q8IU57 520 aaPredicted RBP21.54■■□□□ 1.04
HLCS-204ENST00000427746 THNSL1Q8IYQ7 743 aa21.54■■□□□ 1.04
HLCS-204ENST00000427746 NOL7Q9UMY1 257 aaKnown RBP21.54■■□□□ 1.04
HLCS-204ENST00000427746 RAB27AP51159 221 aa21.53■■□□□ 1.04
HLCS-204ENST00000427746 PTENP60484 403 aa21.53■■□□□ 1.04
HLCS-204ENST00000427746 POU5F1BQ06416 359 aa21.53■■□□□ 1.04
HLCS-204ENST00000427746 KCNT2Q6UVM3 1135 aa21.53■■□□□ 1.04
HLCS-204ENST00000427746 ASAP3Q8TDY4 903 aa21.53■■□□□ 1.04
HLCS-204ENST00000427746 RSPH1Q8WYR4 309 aa21.53■■□□□ 1.04
HLCS-204ENST00000427746 LZTS1Q9Y250 596 aa21.53■■□□□ 1.04
HLCS-204ENST00000427746 PCDHGC5Q9Y5F6 944 aa21.53■■□□□ 1.04
HLCS-204ENST00000427746 GRXCR2A6NFK2 248 aa21.52■■□□□ 1.04
HLCS-204ENST00000427746 MEIS3P2A8K0S8 358 aa21.52■■□□□ 1.04
HLCS-204ENST00000427746 RPA1P27694 616 aa21.52■■□□□ 1.04
HLCS-204ENST00000427746 FXR2P51116 673 aaKnown RBP eCLIP21.52■■□□□ 1.04
HLCS-204ENST00000427746 DLX2Q07687 328 aaPredicted RBP21.52■■□□□ 1.04
HLCS-204ENST00000427746 ADAM15Q13444 863 aa21.52■■□□□ 1.04
HLCS-204ENST00000427746 CAPSQ13938 189 aa21.52■■□□□ 1.04
HLCS-204ENST00000427746 PUS10Q3MIT2 529 aaKnown RBP21.52■■□□□ 1.04
HLCS-204ENST00000427746 PTCRAQ6ISU1 281 aaPredicted RBP21.52■■□□□ 1.04
HLCS-204ENST00000427746 LPPQ93052 612 aa21.52■■□□□ 1.04
HLCS-204ENST00000427746 ZNF558Q96NG5 402 aa21.52■■□□□ 1.04
HLCS-204ENST00000427746 MRPL9Q9BYD2 267 aaKnown RBP21.52■■□□□ 1.04
HLCS-204ENST00000427746 TLR9Q9NR96 1032 aa21.52■■□□□ 1.04
HLCS-204ENST00000427746 DBR1Q9UK59 544 aaKnown RBP21.52■■□□□ 1.04
HLCS-204ENST00000427746 KIF3AQ9Y496 699 aa21.52■■□□□ 1.04
HLCS-204ENST00000427746 FSCN2O14926 492 aa21.51■■□□□ 1.03
HLCS-204ENST00000427746 LINC01565O15544 149 aa21.51■■□□□ 1.03
HLCS-204ENST00000427746 GLRA2P23416 452 aa21.51■■□□□ 1.03
HLCS-204ENST00000427746 PPM1AP35813 382 aa21.51■■□□□ 1.03
HLCS-204ENST00000427746 PBX3P40426 434 aa21.51■■□□□ 1.03
HLCS-204ENST00000427746 MCM2P49736 904 aa21.51■■□□□ 1.03
HLCS-204ENST00000427746 ERVFC1P60507 584 aa21.51■■□□□ 1.03
HLCS-204ENST00000427746 TFDP1Q14186 410 aa21.51■■□□□ 1.03
HLCS-204ENST00000427746 PCBP1Q15365 356 aaKnown RBP eCLIP21.51■■□□□ 1.03
HLCS-204ENST00000427746 UBXN11Q5T124 520 aa21.51■■□□□ 1.03
HLCS-204ENST00000427746 POTEGQ6S5H5 508 aa21.51■■□□□ 1.03
HLCS-204ENST00000427746 EP400NLQ6ZTU2 488 aa21.51■■□□□ 1.03
HLCS-204ENST00000427746 MRPL10Q7Z7H8 261 aaKnown RBP21.51■■□□□ 1.03
HLCS-204ENST00000427746 ERMNQ8TAM6 284 aa21.51■■□□□ 1.03
HLCS-204ENST00000427746 MRPS27Q92552 414 aaKnown RBP21.51■■□□□ 1.03
HLCS-204ENST00000427746 PPP2R3CQ969Q6 453 aa21.51■■□□□ 1.03
HLCS-204ENST00000427746 CCDC43Q96MW1 224 aaKnown RBP21.51■■□□□ 1.03
HLCS-204ENST00000427746 NACC1Q96RE7 527 aa21.51■■□□□ 1.03
HLCS-204ENST00000427746 IGFLR1Q9H665 355 aa21.51■■□□□ 1.03
HLCS-204ENST00000427746 PCDHB6Q9Y5E3 794 aa21.51■■□□□ 1.03
HLCS-204ENST00000427746 PCDHB2Q9Y5E7 798 aa21.51■■□□□ 1.03
HLCS-204ENST00000427746 NCOR1O75376 2440 aa21.51■■□□□ 1.03
HLCS-204ENST00000427746 USO1O60763 962 aaKnown RBP21.5■■□□□ 1.03
HLCS-204ENST00000427746 TBX10O75333 385 aa21.5■■□□□ 1.03
HLCS-204ENST00000427746 IL9P15248 144 aa21.5■■□□□ 1.03
HLCS-204ENST00000427746 LONRF3Q496Y0 759 aa21.5■■□□□ 1.03
HLCS-204ENST00000427746 PDE12Q6L8Q7 609 aaKnown RBP21.5■■□□□ 1.03
HLCS-204ENST00000427746 FAM178BQ8IXR5 827 aa21.5■■□□□ 1.03
HLCS-204ENST00000427746 SLC39A11Q8N1S5 342 aa21.5■■□□□ 1.03
HLCS-204ENST00000427746 EFHBQ8N7U6 833 aa21.5■■□□□ 1.03
HLCS-204ENST00000427746 NFKBIZQ9BYH8 718 aa21.5■■□□□ 1.03
HLCS-204ENST00000427746 SPG21Q9NZD8 308 aa21.5■■□□□ 1.03
HLCS-204ENST00000427746 TSPAN1O60635 241 aa21.49■■□□□ 1.03
HLCS-204ENST00000427746 OFD1O75665 1012 aa21.49■■□□□ 1.03
HLCS-204ENST00000427746 MUTP22033 750 aa21.49■■□□□ 1.03
HLCS-204ENST00000427746 NRIP1P48552 1158 aa21.49■■□□□ 1.03
HLCS-204ENST00000427746 MBTD1Q05BQ5 628 aa21.49■■□□□ 1.03
HLCS-204ENST00000427746 PTGDRQ13258 359 aa21.49■■□□□ 1.03
HLCS-204ENST00000427746 AMHR2Q16671 573 aa21.49■■□□□ 1.03
HLCS-204ENST00000427746 GLB1LQ6UWU2 654 aa21.49■■□□□ 1.03
HLCS-204ENST00000427746 AGMOQ6ZNB7 445 aa21.49■■□□□ 1.03
HLCS-204ENST00000427746 PGBD4Q96DM1 585 aa21.49■■□□□ 1.03
HLCS-204ENST00000427746 POLR3FQ9H1D9 316 aaPredicted RBP21.49■■□□□ 1.03
HLCS-204ENST00000427746 ERLIN2O94905 339 aa21.48■■□□□ 1.03
HLCS-204ENST00000427746 GJB2P29033 226 aa21.48■■□□□ 1.03
HLCS-204ENST00000427746 AXLP30530 894 aa21.48■■□□□ 1.03
HLCS-204ENST00000427746 BCAR1P56945 870 aa21.48■■□□□ 1.03
HLCS-204ENST00000427746 PDIA5Q14554 519 aa21.48■■□□□ 1.03
HLCS-204ENST00000427746 NOMO2Q5JPE7 1267 aa21.48■■□□□ 1.03
HLCS-204ENST00000427746 HAUS3Q68CZ6 603 aa21.48■■□□□ 1.03
HLCS-204ENST00000427746 RBM23Q86U06 439 aaKnown RBP21.48■■□□□ 1.03
HLCS-204ENST00000427746 IGSF22Q8N9C0 903 aa21.48■■□□□ 1.03
HLCS-204ENST00000427746 MCPH1Q8NEM0 835 aa21.48■■□□□ 1.03
HLCS-204ENST00000427746 MICAL1Q8TDZ2 1067 aa21.48■■□□□ 1.03
HLCS-204ENST00000427746 MSLNLQ96KJ4 702 aa21.48■■□□□ 1.03
HLCS-204ENST00000427746 TLE6Q9H808 572 aa21.48■■□□□ 1.03
HLCS-204ENST00000427746 CD320Q9NPF0 282 aa21.48■■□□□ 1.03
HLCS-204ENST00000427746 GPRC5CQ9NQ84 441 aa21.48■■□□□ 1.03
HLCS-204ENST00000427746 TBC1D13Q9NVG8 400 aa21.48■■□□□ 1.03
HLCS-204ENST00000427746 LRWD1Q9UFC0 647 aa21.48■■□□□ 1.03
HLCS-204ENST00000427746 PUF60Q9UHX1 559 aaKnown RBP21.48■■□□□ 1.03
HLCS-204ENST00000427746 INO80B-WBP1J3KQ70 363 aa21.47■■□□□ 1.03
HLCS-204ENST00000427746 GLP2RO95838 553 aa21.47■■□□□ 1.03
HLCS-204ENST00000427746 NCLP19338 710 aaKnown RBP21.47■■□□□ 1.03
HLCS-204ENST00000427746 KRT17Q04695 432 aa21.47■■□□□ 1.03
HLCS-204ENST00000427746 ECM1Q16610 540 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms