RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 TRAPPC10P48553 1259 aa11.34□□□□□ -0.59
COMMD1-202ENST00000427417 NDUFV1P49821 464 aa11.34□□□□□ -0.59
COMMD1-202ENST00000427417 PLCB3Q01970 1234 aa11.34□□□□□ -0.59
COMMD1-202ENST00000427417 KRT17Q04695 432 aa11.34□□□□□ -0.59
COMMD1-202ENST00000427417 NCBP1Q09161 790 aaKnown RBP11.34□□□□□ -0.59
COMMD1-202ENST00000427417 TFDP1Q14186 410 aa11.34□□□□□ -0.59
COMMD1-202ENST00000427417 KCNT2Q6UVM3 1135 aa11.34□□□□□ -0.59
COMMD1-202ENST00000427417 FERMT3Q86UX7 667 aa11.34□□□□□ -0.59
COMMD1-202ENST00000427417 ZNF579Q8NAF0 562 aaKnown RBP11.34□□□□□ -0.59
COMMD1-202ENST00000427417 RNF149Q8NC42 400 aa11.34□□□□□ -0.59
COMMD1-202ENST00000427417 ERMNQ8TAM6 284 aa11.34□□□□□ -0.59
COMMD1-202ENST00000427417 MRPS27Q92552 414 aaKnown RBP11.34□□□□□ -0.59
COMMD1-202ENST00000427417 CDCA3Q99618 268 aaPredicted RBP11.34□□□□□ -0.59
COMMD1-202ENST00000427417 KIF2CQ99661 725 aa11.34□□□□□ -0.59
COMMD1-202ENST00000427417 BMP2KQ9NSY1 1161 aaPredicted RBP11.34□□□□□ -0.59
COMMD1-202ENST00000427417 AGPAT5Q9NUQ2 364 aa11.34□□□□□ -0.59
COMMD1-202ENST00000427417 FAM105AQ9NUU6 356 aa11.34□□□□□ -0.59
COMMD1-202ENST00000427417 RNF19AQ9NV58 838 aa11.34□□□□□ -0.59
COMMD1-202ENST00000427417 FAM86C2PA6NEL3 165 aa11.33□□□□□ -0.6
COMMD1-202ENST00000427417 POTEMA6NI47 508 aa11.33□□□□□ -0.6
COMMD1-202ENST00000427417 WNT7AO00755 349 aa11.33□□□□□ -0.6
COMMD1-202ENST00000427417 ZNF623O75123 536 aa11.33□□□□□ -0.6
COMMD1-202ENST00000427417 ERLIN2O94905 339 aa11.33□□□□□ -0.6
COMMD1-202ENST00000427417 OR52Z1P0C646 297 aa11.33□□□□□ -0.6
COMMD1-202ENST00000427417 SRGAP2BP0DMP2 458 aa11.33□□□□□ -0.6
COMMD1-202ENST00000427417 ATF7P17544 494 aaPredicted RBP11.33□□□□□ -0.6
COMMD1-202ENST00000427417 AXLP30530 894 aa11.33□□□□□ -0.6
COMMD1-202ENST00000427417 NRIP1P48552 1158 aa11.33□□□□□ -0.6
COMMD1-202ENST00000427417 ALDH7A1P49419 539 aaKnown RBP11.33□□□□□ -0.6
COMMD1-202ENST00000427417 RARRES1P49788 294 aa11.33□□□□□ -0.6
COMMD1-202ENST00000427417 POU5F1BQ06416 359 aa11.33□□□□□ -0.6
COMMD1-202ENST00000427417 ADAM15Q13444 863 aa11.33□□□□□ -0.6
COMMD1-202ENST00000427417 BMS1Q14692 1282 aaKnown RBP11.33□□□□□ -0.6
COMMD1-202ENST00000427417 CLLU1OSQ5K130 101 aa11.33□□□□□ -0.6
COMMD1-202ENST00000427417 GLB1LQ6UWU2 654 aa11.33□□□□□ -0.6
COMMD1-202ENST00000427417 LRRC55Q6ZSA7 311 aa11.33□□□□□ -0.6
COMMD1-202ENST00000427417 NOSTRINQ8IVI9 506 aa11.33□□□□□ -0.6
COMMD1-202ENST00000427417 FAM178BQ8IXR5 827 aa11.33□□□□□ -0.6
COMMD1-202ENST00000427417 EFHBQ8N7U6 833 aa11.33□□□□□ -0.6
COMMD1-202ENST00000427417 CNNM3Q8NE01 707 aa11.33□□□□□ -0.6
COMMD1-202ENST00000427417 HELQQ8TDG4 1101 aa11.33□□□□□ -0.6
COMMD1-202ENST00000427417 C1QTNF1Q9BXJ1 281 aa11.33□□□□□ -0.6
COMMD1-202ENST00000427417 TMEM60Q9H2L4 133 aa11.33□□□□□ -0.6
COMMD1-202ENST00000427417 TLE6Q9H808 572 aa11.33□□□□□ -0.6
COMMD1-202ENST00000427417 TUFT1Q9NNX1 390 aa11.33□□□□□ -0.6
COMMD1-202ENST00000427417 NGRNQ9NPE2 291 aaKnown RBP11.33□□□□□ -0.6
COMMD1-202ENST00000427417 SPG21Q9NZD8 308 aa11.33□□□□□ -0.6
COMMD1-202ENST00000427417 PRKAG3Q9UGI9 489 aa11.33□□□□□ -0.6
COMMD1-202ENST00000427417 ZBTB39O15060 712 aa11.32□□□□□ -0.6
COMMD1-202ENST00000427417 SSTR3P32745 418 aaPredicted RBP11.32□□□□□ -0.6
COMMD1-202ENST00000427417 PBX3P40426 434 aa11.32□□□□□ -0.6
COMMD1-202ENST00000427417 TECP42680 631 aa11.32□□□□□ -0.6
COMMD1-202ENST00000427417 ZNF174Q15697 407 aa11.32□□□□□ -0.6
COMMD1-202ENST00000427417 TTC38Q5R3I4 469 aa11.32□□□□□ -0.6
COMMD1-202ENST00000427417 HAUS3Q68CZ6 603 aa11.32□□□□□ -0.6
COMMD1-202ENST00000427417 RBM23Q86U06 439 aaKnown RBP11.32□□□□□ -0.6
COMMD1-202ENST00000427417 GJD3Q8N144 294 aa11.32□□□□□ -0.6
COMMD1-202ENST00000427417 URGCPQ8TCY9 931 aa11.32□□□□□ -0.6
COMMD1-202ENST00000427417 CCDC51Q96ER9 411 aa11.32□□□□□ -0.6
COMMD1-202ENST00000427417 NACC1Q96RE7 527 aa11.32□□□□□ -0.6
COMMD1-202ENST00000427417 UBN1Q9NPG3 1134 aa11.32□□□□□ -0.6
COMMD1-202ENST00000427417 ENTPD7Q9NQZ7 604 aa11.32□□□□□ -0.6
COMMD1-202ENST00000427417 CD207Q9UJ71 328 aa11.32□□□□□ -0.6
COMMD1-202ENST00000427417 PCDHB2Q9Y5E7 798 aa11.32□□□□□ -0.6
COMMD1-202ENST00000427417 STK24Q9Y6E0 443 aa11.32□□□□□ -0.6
COMMD1-202ENST00000427417 CNTNAP2Q9UHC6 1331 aa11.32□□□□□ -0.6
COMMD1-202ENST00000427417 BDP1A6H8Y1 2624 aa11.31□□□□□ -0.6
COMMD1-202ENST00000427417 FSCN2O14926 492 aa11.31□□□□□ -0.6
COMMD1-202ENST00000427417 MUTP22033 750 aa11.31□□□□□ -0.6
COMMD1-202ENST00000427417 RPA1P27694 616 aa11.31□□□□□ -0.6
COMMD1-202ENST00000427417 ARL2P36404 184 aa11.31□□□□□ -0.6
COMMD1-202ENST00000427417 MCM2P49736 904 aa11.31□□□□□ -0.6
COMMD1-202ENST00000427417 PTENP60484 403 aa11.31□□□□□ -0.6
COMMD1-202ENST00000427417 ERVFC1P60507 584 aa11.31□□□□□ -0.6
COMMD1-202ENST00000427417 RBM10P98175 930 aaKnown RBP11.31□□□□□ -0.6
COMMD1-202ENST00000427417 RNASELQ05823 741 aaKnown RBP11.31□□□□□ -0.6
COMMD1-202ENST00000427417 SMAD4Q13485 552 aaKnown RBP11.31□□□□□ -0.6
COMMD1-202ENST00000427417 SMAD2Q15796 467 aaKnown RBP11.31□□□□□ -0.6
COMMD1-202ENST00000427417 LONRF3Q496Y0 759 aa11.31□□□□□ -0.6
COMMD1-202ENST00000427417 NOMO2Q5JPE7 1267 aa11.31□□□□□ -0.6
COMMD1-202ENST00000427417 NOTUMQ6P988 496 aa11.31□□□□□ -0.6
COMMD1-202ENST00000427417 TMC7Q7Z402 723 aa11.31□□□□□ -0.6
COMMD1-202ENST00000427417 CATSPER3Q86XQ3 398 aa11.31□□□□□ -0.6
COMMD1-202ENST00000427417 IFNLR1Q8IU57 520 aaPredicted RBP11.31□□□□□ -0.6
COMMD1-202ENST00000427417 SLC39A11Q8N1S5 342 aa11.31□□□□□ -0.6
COMMD1-202ENST00000427417 MCPH1Q8NEM0 835 aa11.31□□□□□ -0.6
COMMD1-202ENST00000427417 PIGOQ8TEQ8 1089 aa11.31□□□□□ -0.6
COMMD1-202ENST00000427417 TMEM169Q96HH4 297 aa11.31□□□□□ -0.6
COMMD1-202ENST00000427417 POP1Q99575 1024 aaKnown RBP11.31□□□□□ -0.6
COMMD1-202ENST00000427417 TCF25Q9BQ70 676 aa11.31□□□□□ -0.6
COMMD1-202ENST00000427417 POLR3CQ9BUI4 534 aaPredicted RBP11.31□□□□□ -0.6
COMMD1-202ENST00000427417 NFKBIZQ9BYH8 718 aa11.31□□□□□ -0.6
COMMD1-202ENST00000427417 RAB34Q9BZG1 259 aa11.31□□□□□ -0.6
COMMD1-202ENST00000427417 MINDY3Q9H8M7 445 aa11.31□□□□□ -0.6
COMMD1-202ENST00000427417 XPNPEP1Q9NQW7 623 aa11.31□□□□□ -0.6
COMMD1-202ENST00000427417 KANSL3Q9P2N6 904 aa11.31□□□□□ -0.6
COMMD1-202ENST00000427417 STK39Q9UEW8 545 aa11.31□□□□□ -0.6
COMMD1-202ENST00000427417 DBR1Q9UK59 544 aaKnown RBP11.31□□□□□ -0.6
COMMD1-202ENST00000427417 INO80B-WBP1J3KQ70 363 aa11.3□□□□□ -0.6
COMMD1-202ENST00000427417 LAD1O00515 517 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms