RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 THSD7AQ9UPZ6 1657 aa7.44□□□□□ -1.22
C9orf3-205ENST00000427193 LONRF2Q1L5Z9 754 aa7.43□□□□□ -1.22
C9orf3-205ENST00000427193 FAM47CQ5HY64 1035 aa7.43□□□□□ -1.22
C9orf3-205ENST00000427193 FOXB2Q5VYV0 432 aa7.43□□□□□ -1.22
C9orf3-205ENST00000427193 KRT28Q7Z3Y7 464 aa7.43□□□□□ -1.22
C9orf3-205ENST00000427193 EDAQ92838 391 aa7.43□□□□□ -1.22
C9orf3-205ENST00000427193 ZDHHC5Q9C0B5 715 aa7.43□□□□□ -1.22
C9orf3-205ENST00000427193 INCENPQ9NQS7 918 aa7.43□□□□□ -1.22
C9orf3-205ENST00000427193 GALNT8Q9NY28 637 aa7.43□□□□□ -1.22
C9orf3-205ENST00000427193 OAZ3Q9UMX2 235 aa7.43□□□□□ -1.22
C9orf3-205ENST00000427193 TNS3Q68CZ2 1445 aa7.43□□□□□ -1.22
C9orf3-205ENST00000427193 NRKQ7Z2Y5 1582 aa7.42□□□□□ -1.22
C9orf3-205ENST00000427193 KIF1AQ12756 1690 aa7.42□□□□□ -1.22
C9orf3-205ENST00000427193 NRAPQ86VF7 1730 aa7.42□□□□□ -1.22
C9orf3-205ENST00000427193 ZNF561-AS1K7EIQ3 104 aa7.42□□□□□ -1.22
C9orf3-205ENST00000427193 SUV39H1O43463 412 aa7.42□□□□□ -1.22
C9orf3-205ENST00000427193 CLASP2O75122 1294 aaKnown RBP7.42□□□□□ -1.22
C9orf3-205ENST00000427193 SLPIP03973 132 aa7.42□□□□□ -1.22
C9orf3-205ENST00000427193 HSPA6P17066 643 aa7.42□□□□□ -1.22
C9orf3-205ENST00000427193 KRT15P19012 456 aa7.42□□□□□ -1.22
C9orf3-205ENST00000427193 CR2P20023 1033 aa7.42□□□□□ -1.22
C9orf3-205ENST00000427193 COMTP21964 271 aa7.42□□□□□ -1.22
C9orf3-205ENST00000427193 AOAHP28039 575 aa7.42□□□□□ -1.22
C9orf3-205ENST00000427193 IL13RA1P78552 427 aa7.42□□□□□ -1.22
C9orf3-205ENST00000427193 TMF1P82094 1093 aa7.42□□□□□ -1.22
C9orf3-205ENST00000427193 RNF151Q2KHN1 245 aa7.42□□□□□ -1.22
C9orf3-205ENST00000427193 FUKQ8N0W3 1084 aa7.42□□□□□ -1.22
C9orf3-205ENST00000427193 ADOQ96SZ5 270 aa7.42□□□□□ -1.22
C9orf3-205ENST00000427193 DHRS4Q9BTZ2 278 aa7.42□□□□□ -1.22
C9orf3-205ENST00000427193 MSL2Q9HCI7 577 aa7.42□□□□□ -1.22
C9orf3-205ENST00000427193 SIRPGQ9P1W8 387 aa7.42□□□□□ -1.22
C9orf3-205ENST00000427193 RAD17O75943 681 aa7.41□□□□□ -1.22
C9orf3-205ENST00000427193 C4BPAP04003 597 aaKnown RBP7.41□□□□□ -1.22
C9orf3-205ENST00000427193 SRGAP2CP0DJJ0 459 aa7.41□□□□□ -1.22
C9orf3-205ENST00000427193 RRADP55042 308 aa7.41□□□□□ -1.22
C9orf3-205ENST00000427193 JAM2P57087 298 aa7.41□□□□□ -1.22
C9orf3-205ENST00000427193 NFYCQ13952 458 aa7.41□□□□□ -1.22
C9orf3-205ENST00000427193 STILQ15468 1287 aa7.41□□□□□ -1.22
C9orf3-205ENST00000427193 ZFPM1Q8IX07 1006 aa7.41□□□□□ -1.22
C9orf3-205ENST00000427193 WNK4Q96J92 1243 aa7.41□□□□□ -1.22
C9orf3-205ENST00000427193 EXOC2Q96KP1 924 aa7.41□□□□□ -1.22
C9orf3-205ENST00000427193 MRIQ9BWK5 157 aa7.41□□□□□ -1.22
C9orf3-205ENST00000427193 BTBD7Q9P203 1132 aa7.41□□□□□ -1.22
C9orf3-205ENST00000427193 NR2E1Q9Y466 385 aa7.41□□□□□ -1.22
C9orf3-205ENST00000427193 PCDHA9Q9Y5H5 950 aa7.41□□□□□ -1.22
C9orf3-205ENST00000427193 SLC30A1Q9Y6M5 507 aa7.41□□□□□ -1.22
C9orf3-205ENST00000427193 ATP7BP35670 1465 aa7.41□□□□□ -1.22
C9orf3-205ENST00000427193 CD163L1Q9NR16 1453 aa7.41□□□□□ -1.22
C9orf3-205ENST00000427193 QRICH2Q9H0J4 1663 aa7.41□□□□□ -1.22
C9orf3-205ENST00000427193 CCDC66A2RUB6 948 aa7.4□□□□□ -1.22
C9orf3-205ENST00000427193 PRAMEF25A6NGN4 478 aa7.4□□□□□ -1.22
C9orf3-205ENST00000427193 CCDC85CA6NKD9 419 aa7.4□□□□□ -1.22
C9orf3-205ENST00000427193 DIAPH1O60610 1272 aaKnown RBP7.4□□□□□ -1.22
C9orf3-205ENST00000427193 HMGCRP04035 888 aa7.4□□□□□ -1.22
C9orf3-205ENST00000427193 LACTBP83111 547 aaPredicted RBP7.4□□□□□ -1.22
C9orf3-205ENST00000427193 NAALADL2Q58DX5 795 aa7.4□□□□□ -1.22
C9orf3-205ENST00000427193 ZC3H12BQ5HYM0 836 aaKnown RBP7.4□□□□□ -1.22
C9orf3-205ENST00000427193 POLNQ7Z5Q5 900 aa7.4□□□□□ -1.22
C9orf3-205ENST00000427193 ZC3H7AQ8IWR0 971 aaKnown RBP7.4□□□□□ -1.22
C9orf3-205ENST00000427193 BTBD2Q9BX70 525 aa7.4□□□□□ -1.22
C9orf3-205ENST00000427193 SMURF1Q9HCE7 757 aa7.4□□□□□ -1.22
C9orf3-205ENST00000427193 SPATA31A1Q5TZJ5 1347 aa7.4□□□□□ -1.22
C9orf3-205ENST00000427193 EVC2Q86UK5 1308 aa7.4□□□□□ -1.22
C9orf3-205ENST00000427193 SBNO1A3KN83 1393 aa7.4□□□□□ -1.22
C9orf3-205ENST00000427193 ARHGEF10O15013 1369 aa7.4□□□□□ -1.22
C9orf3-205ENST00000427193 MAP3K5Q99683 1374 aa7.4□□□□□ -1.22
C9orf3-205ENST00000427193 ANKARQ7Z5J8 1434 aa7.4□□□□□ -1.22
C9orf3-205ENST00000427193 ABCA3Q99758 1704 aa7.4□□□□□ -1.23
C9orf3-205ENST00000427193 RGPD3A6NKT7 1758 aaPredicted RBP7.4□□□□□ -1.23
C9orf3-205ENST00000427193 RGPD4Q7Z3J3 1758 aa7.4□□□□□ -1.23
C9orf3-205ENST00000427193 CASZ1Q86V15 1759 aa7.4□□□□□ -1.23
C9orf3-205ENST00000427193 CPSF1Q10570 1443 aaKnown RBP7.39□□□□□ -1.23
C9orf3-205ENST00000427193 CRTAMO95727 393 aa7.39□□□□□ -1.23
C9orf3-205ENST00000427193 APPP05067 770 aa7.39□□□□□ -1.23
C9orf3-205ENST00000427193 FAM153BP0C7A2 387 aa7.39□□□□□ -1.23
C9orf3-205ENST00000427193 ATP2B1P20020 1258 aa7.39□□□□□ -1.23
C9orf3-205ENST00000427193 AGBL4Q5VU57 503 aa7.39□□□□□ -1.23
C9orf3-205ENST00000427193 RNF207Q6ZRF8 634 aa7.39□□□□□ -1.23
C9orf3-205ENST00000427193 CDK19Q9BWU1 502 aa7.39□□□□□ -1.23
C9orf3-205ENST00000427193 PCED1AQ9H1Q7 454 aa7.39□□□□□ -1.23
C9orf3-205ENST00000427193 POGKQ9P215 609 aa7.39□□□□□ -1.23
C9orf3-205ENST00000427193 MRPS23Q9Y3D9 190 aaKnown RBP7.39□□□□□ -1.23
C9orf3-205ENST00000427193 COL14A1Q05707 1796 aaKnown RBP7.38□□□□□ -1.23
C9orf3-205ENST00000427193 MYOM1P52179 1685 aa7.38□□□□□ -1.23
C9orf3-205ENST00000427193 SSH2Q76I76 1423 aa7.38□□□□□ -1.23
C9orf3-205ENST00000427193 ARHGAP6O43182 974 aa7.38□□□□□ -1.23
C9orf3-205ENST00000427193 CDC14BO60729 498 aa7.38□□□□□ -1.23
C9orf3-205ENST00000427193 MC4RP32245 332 aa7.38□□□□□ -1.23
C9orf3-205ENST00000427193 DNM2P50570 870 aa7.38□□□□□ -1.23
C9orf3-205ENST00000427193 KCNQ1P51787 676 aa7.38□□□□□ -1.23
C9orf3-205ENST00000427193 FOXE3Q13461 319 aa7.38□□□□□ -1.23
C9orf3-205ENST00000427193 EIF4HQ15056 248 aaKnown RBP7.38□□□□□ -1.23
C9orf3-205ENST00000427193 MIIPQ5JXC2 388 aa7.38□□□□□ -1.23
C9orf3-205ENST00000427193 DPYSL5Q9BPU6 564 aa7.38□□□□□ -1.23
C9orf3-205ENST00000427193 ZNF341Q9BYN7 854 aa7.38□□□□□ -1.23
C9orf3-205ENST00000427193 TANGO6Q9C0B7 1094 aa7.38□□□□□ -1.23
C9orf3-205ENST00000427193 HS3ST3A1Q9Y663 406 aa7.38□□□□□ -1.23
C9orf3-205ENST00000427193 POLR3AO14802 1390 aaPredicted RBP7.37□□□□□ -1.23
C9orf3-205ENST00000427193 NPC1L1Q9UHC9 1359 aa7.37□□□□□ -1.23
C9orf3-205ENST00000427193 KDM2BQ8NHM5 1336 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms