RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 PPP1R9AQ9ULJ8 1098 aa14.89□□□□□ -0.03
RPL28-202ENST00000426763 CTDNEP1O95476 244 aa14.88□□□□□ -0.03
RPL28-202ENST00000426763 RPA1P27694 616 aa14.88□□□□□ -0.03
RPL28-202ENST00000426763 DPF2Q92785 391 aa14.88□□□□□ -0.03
RPL28-202ENST00000426763 TCRBV5S4A2TA0A5A2 114 aa14.88□□□□□ -0.03
RPL28-202ENST00000426763 TRIM49P0CI25 452 aa14.88□□□□□ -0.03
RPL28-202ENST00000426763 TRIM49CP0CI26 452 aa14.88□□□□□ -0.03
RPL28-202ENST00000426763 MTIF3Q9H2K0 278 aaKnown RBP14.88□□□□□ -0.03
RPL28-202ENST00000426763 RRN3P2A6NIE6 340 aa14.88□□□□□ -0.03
RPL28-202ENST00000426763 M0QYV0 167 aa14.88□□□□□ -0.03
RPL28-202ENST00000426763 GNA15P30679 374 aa14.88□□□□□ -0.03
RPL28-202ENST00000426763 GPC5P78333 572 aa14.88□□□□□ -0.03
RPL28-202ENST00000426763 DRAP1Q14919 205 aaPredicted RBP14.88□□□□□ -0.03
RPL28-202ENST00000426763 ANKEF1Q9NU02 776 aa14.88□□□□□ -0.03
RPL28-202ENST00000426763 ASNSD1Q9NWL6 643 aa14.88□□□□□ -0.03
RPL28-202ENST00000426763 STX2P32856 288 aa14.88□□□□□ -0.03
RPL28-202ENST00000426763 B4GALNT4Q76KP1 1039 aa14.88□□□□□ -0.03
RPL28-202ENST00000426763 KCNB2Q92953 911 aa14.88□□□□□ -0.03
RPL28-202ENST00000426763 SH2D3AQ9BRG2 576 aa14.88□□□□□ -0.03
RPL28-202ENST00000426763 A8MXQ7 604 aa14.87□□□□□ -0.03
RPL28-202ENST00000426763 VCAM1P19320 739 aa14.87□□□□□ -0.03
RPL28-202ENST00000426763 PASD1Q8IV76 773 aa14.87□□□□□ -0.03
RPL28-202ENST00000426763 EFCAB13Q8IY85 973 aa14.87□□□□□ -0.03
RPL28-202ENST00000426763 ANKRD42Q8N9B4 389 aa14.87□□□□□ -0.03
RPL28-202ENST00000426763 GIMAP7Q8NHV1 300 aa14.87□□□□□ -0.03
RPL28-202ENST00000426763 ZWILCHQ9H900 591 aa14.87□□□□□ -0.03
RPL28-202ENST00000426763 HSPBP1Q9NZL4 362 aa14.87□□□□□ -0.03
RPL28-202ENST00000426763 ANAPC7Q9UJX3 599 aa14.87□□□□□ -0.03
RPL28-202ENST00000426763 MUM1L1Q5H9M0 696 aa14.87□□□□□ -0.03
RPL28-202ENST00000426763 ANKRD40Q6AI12 368 aa14.87□□□□□ -0.03
RPL28-202ENST00000426763 WNT10BO00744 389 aa14.87□□□□□ -0.03
RPL28-202ENST00000426763 CTSHP09668 335 aa14.87□□□□□ -0.03
RPL28-202ENST00000426763 GNASQ5JWF2 1037 aa14.87□□□□□ -0.03
RPL28-202ENST00000426763 ZNF746Q6NUN9 644 aaPredicted RBP14.87□□□□□ -0.03
RPL28-202ENST00000426763 DNAAF3Q8N9W5 541 aa14.87□□□□□ -0.03
RPL28-202ENST00000426763 RABGGTAQ92696 567 aa14.87□□□□□ -0.03
RPL28-202ENST00000426763 PLA2G4FQ68DD2 849 aa14.87□□□□□ -0.03
RPL28-202ENST00000426763 OPTNQ96CV9 577 aa14.87□□□□□ -0.03
RPL28-202ENST00000426763 CYP2C9P11712 490 aa14.86□□□□□ -0.03
RPL28-202ENST00000426763 TRIM72Q6ZMU5 477 aa14.86□□□□□ -0.03
RPL28-202ENST00000426763 HSPH1Q92598 858 aa14.86□□□□□ -0.03
RPL28-202ENST00000426763 TMEM60Q9H2L4 133 aa14.86□□□□□ -0.03
RPL28-202ENST00000426763 TRAPPC3O43617 180 aa14.86□□□□□ -0.03
RPL28-202ENST00000426763 RHOBTB3O94955 611 aa14.86□□□□□ -0.03
RPL28-202ENST00000426763 DPYDQ12882 1025 aa14.86□□□□□ -0.03
RPL28-202ENST00000426763 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.86□□□□□ -0.03
RPL28-202ENST00000426763 POLR3CQ9BUI4 534 aaPredicted RBP14.86□□□□□ -0.03
RPL28-202ENST00000426763 DISP2A7MBM2 1401 aa14.86□□□□□ -0.03
RPL28-202ENST00000426763 CPP00450 1065 aa14.86□□□□□ -0.03
RPL28-202ENST00000426763 KCNJ6P48051 423 aa14.86□□□□□ -0.03
RPL28-202ENST00000426763 RNF180Q86T96 592 aa14.86□□□□□ -0.03
RPL28-202ENST00000426763 FAM163AQ96GL9 167 aaPredicted RBP14.86□□□□□ -0.03
RPL28-202ENST00000426763 C11orf70Q9BRQ4 267 aa14.86□□□□□ -0.03
RPL28-202ENST00000426763 IDI2Q9BXS1 227 aa14.86□□□□□ -0.03
RPL28-202ENST00000426763 STAP1Q9ULZ2 295 aa14.86□□□□□ -0.03
RPL28-202ENST00000426763 DIS3Q9Y2L1 958 aaKnown RBP14.86□□□□□ -0.03
RPL28-202ENST00000426763 MIF4GDA9UHW6 222 aaKnown RBP14.86□□□□□ -0.03
RPL28-202ENST00000426763 RWDD4Q6NW29 188 aaKnown RBP14.86□□□□□ -0.03
RPL28-202ENST00000426763 MOXD1Q6UVY6 613 aa14.86□□□□□ -0.03
RPL28-202ENST00000426763 SCYL1Q96KG9 808 aa14.86□□□□□ -0.03
RPL28-202ENST00000426763 RRAGCQ9HB90 399 aa14.86□□□□□ -0.03
RPL28-202ENST00000426763 A0A1W2PQC6 194 aa14.86□□□□□ -0.03
RPL28-202ENST00000426763 MYMKA6NI61 221 aa14.86□□□□□ -0.03
RPL28-202ENST00000426763 CIB2O75838 187 aa14.86□□□□□ -0.03
RPL28-202ENST00000426763 HEXIM1O94992 359 aaKnown RBP14.86□□□□□ -0.03
RPL28-202ENST00000426763 ZBED1O96006 694 aa14.86□□□□□ -0.03
RPL28-202ENST00000426763 CXCR5P32302 372 aa14.86□□□□□ -0.03
RPL28-202ENST00000426763 BASP1P80723 227 aaKnown RBP14.86□□□□□ -0.03
RPL28-202ENST00000426763 PPP4R1Q8TF05 950 aa14.86□□□□□ -0.03
RPL28-202ENST00000426763 RBM41Q96IZ5 413 aaKnown RBP14.86□□□□□ -0.03
RPL28-202ENST00000426763 TNIP3Q96KP6 325 aa14.86□□□□□ -0.03
RPL28-202ENST00000426763 LRRC4BQ9NT99 713 aa14.86□□□□□ -0.03
RPL28-202ENST00000426763 RPS6KA5O75582 802 aa14.85□□□□□ -0.03
RPL28-202ENST00000426763 APBA1Q02410 837 aa14.85□□□□□ -0.03
RPL28-202ENST00000426763 LLGL1Q15334 1064 aa14.85□□□□□ -0.03
RPL28-202ENST00000426763 FKBP1CQ5VVH2 108 aa14.85□□□□□ -0.03
RPL28-202ENST00000426763 MGARPQ8TDB4 240 aa14.85□□□□□ -0.03
RPL28-202ENST00000426763 GOLGA8KD6RF30 607 aa14.85□□□□□ -0.03
RPL28-202ENST00000426763 PPFIA4O75335 1185 aa14.85□□□□□ -0.03
RPL28-202ENST00000426763 INHBAP08476 426 aa14.85□□□□□ -0.03
RPL28-202ENST00000426763 SEC23AQ15436 765 aa14.85□□□□□ -0.03
RPL28-202ENST00000426763 EFCAB12Q6NXP0 572 aa14.85□□□□□ -0.03
RPL28-202ENST00000426763 C15orf52Q6ZUT6 534 aaKnown RBP14.85□□□□□ -0.03
RPL28-202ENST00000426763 CXCL11O14625 94 aa14.85□□□□□ -0.03
RPL28-202ENST00000426763 CPB1P15086 417 aa14.85□□□□□ -0.03
RPL28-202ENST00000426763 SCP2P22307 547 aa14.85□□□□□ -0.03
RPL28-202ENST00000426763 SDC4P31431 198 aa14.85□□□□□ -0.03
RPL28-202ENST00000426763 SHMT1P34896 483 aa14.85□□□□□ -0.03
RPL28-202ENST00000426763 TCF7P36402 384 aaPredicted RBP14.85□□□□□ -0.03
RPL28-202ENST00000426763 UHMK1Q8TAS1 419 aaKnown RBP14.85□□□□□ -0.03
RPL28-202ENST00000426763 KIAA1683Q9H0B3 1180 aa14.85□□□□□ -0.03
RPL28-202ENST00000426763 MSH4O15457 936 aa14.85□□□□□ -0.03
RPL28-202ENST00000426763 TJP3O95049 919 aa14.85□□□□□ -0.03
RPL28-202ENST00000426763 ADSSL1Q8N142 457 aa14.85□□□□□ -0.03
RPL28-202ENST00000426763 AKT1S1Q96B36 256 aa14.85□□□□□ -0.03
RPL28-202ENST00000426763 TTC1Q99614 292 aa14.85□□□□□ -0.03
RPL28-202ENST00000426763 PRMT7Q9NVM4 692 aaPredicted RBP14.85□□□□□ -0.03
RPL28-202ENST00000426763 PITPNM2Q9BZ72 1349 aa14.84□□□□□ -0.03
RPL28-202ENST00000426763 MYBL1P10243 752 aa14.84□□□□□ -0.03
RPL28-202ENST00000426763 SAT1P21673 171 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms