RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 KRT79Q5XKE5 535 aa15.13■□□□□ 0.01
SNX3-204ENST00000426155 SRGAP1Q7Z6B7 1085 aa15.13■□□□□ 0.01
SNX3-204ENST00000426155 ZNF598Q86UK7 904 aaKnown RBP15.13■□□□□ 0.01
SNX3-204ENST00000426155 SPRYD3Q8NCJ5 442 aa15.13■□□□□ 0.01
SNX3-204ENST00000426155 HELQQ8TDG4 1101 aa15.13■□□□□ 0.01
SNX3-204ENST00000426155 LPPQ93052 612 aa15.13■□□□□ 0.01
SNX3-204ENST00000426155 SAMD11Q96NU1 681 aa15.13■□□□□ 0.01
SNX3-204ENST00000426155 PNMA5Q96PV4 448 aa15.13■□□□□ 0.01
SNX3-204ENST00000426155 PLIN2Q99541 437 aa15.13■□□□□ 0.01
SNX3-204ENST00000426155 RAB34Q9BZG1 259 aa15.13■□□□□ 0.01
SNX3-204ENST00000426155 INO80BQ9C086 356 aaPredicted RBP15.13■□□□□ 0.01
SNX3-204ENST00000426155 ELAC1Q9H777 363 aaKnown RBP15.13■□□□□ 0.01
SNX3-204ENST00000426155 AGPAT5Q9NUQ2 364 aa15.13■□□□□ 0.01
SNX3-204ENST00000426155 CLIC4Q9Y696 253 aa15.13■□□□□ 0.01
SNX3-204ENST00000426155 A0A0U1RQF3 1178 aa15.12■□□□□ 0.01
SNX3-204ENST00000426155 C5orf67F2Z3F1 127 aa15.12■□□□□ 0.01
SNX3-204ENST00000426155 INO80B-WBP1J3KQ70 363 aa15.12■□□□□ 0.01
SNX3-204ENST00000426155 GRM6O15303 877 aa15.12■□□□□ 0.01
SNX3-204ENST00000426155 ASAP2O43150 1006 aa15.12■□□□□ 0.01
SNX3-204ENST00000426155 B4GALT5O43286 388 aa15.12■□□□□ 0.01
SNX3-204ENST00000426155 TSPAN1O60635 241 aa15.12■□□□□ 0.01
SNX3-204ENST00000426155 MBTD1Q05BQ5 628 aa15.12■□□□□ 0.01
SNX3-204ENST00000426155 MXD4Q14582 209 aaPredicted RBP15.12■□□□□ 0.01
SNX3-204ENST00000426155 LRRC55Q6ZSA7 311 aa15.12■□□□□ 0.01
SNX3-204ENST00000426155 CPB2Q96IY4 423 aa15.12■□□□□ 0.01
SNX3-204ENST00000426155 CASD1Q96PB1 797 aa15.12■□□□□ 0.01
SNX3-204ENST00000426155 ALG13Q9NP73 1137 aaKnown RBP15.12■□□□□ 0.01
SNX3-204ENST00000426155 TSHZ2Q9NRE2 1034 aa15.12■□□□□ 0.01
SNX3-204ENST00000426155 FAM105AQ9NUU6 356 aa15.12■□□□□ 0.01
SNX3-204ENST00000426155 FARP1Q9Y4F1 1045 aaPredicted RBP15.12■□□□□ 0.01
SNX3-204ENST00000426155 BRWD1Q9NSI6 2320 aa15.12■□□□□ 0.01
SNX3-204ENST00000426155 A0A0C4DFX4 3053 aa15.12■□□□□ 0.01
SNX3-204ENST00000426155 TDRD15B5MCY1 1934 aaKnown RBP15.11■□□□□ 0.01
SNX3-204ENST00000426155 LRRIQ4A6NIV6 560 aa15.11■□□□□ 0.01
SNX3-204ENST00000426155 STX6O43752 255 aa15.11■□□□□ 0.01
SNX3-204ENST00000426155 CYP11B2P19099 503 aa15.11■□□□□ 0.01
SNX3-204ENST00000426155 MUTP22033 750 aa15.11■□□□□ 0.01
SNX3-204ENST00000426155 HOXA11P31270 313 aaPredicted RBP15.11■□□□□ 0.01
SNX3-204ENST00000426155 PBX3P40426 434 aa15.11■□□□□ 0.01
SNX3-204ENST00000426155 CEBPZQ03701 1054 aaKnown RBP15.11■□□□□ 0.01
SNX3-204ENST00000426155 TFDP1Q14186 410 aa15.11■□□□□ 0.01
SNX3-204ENST00000426155 SKIV2LQ15477 1246 aaKnown RBP15.11■□□□□ 0.01
SNX3-204ENST00000426155 AMHR2Q16671 573 aa15.11■□□□□ 0.01
SNX3-204ENST00000426155 UBXN11Q5T124 520 aa15.11■□□□□ 0.01
SNX3-204ENST00000426155 SPOUT1Q5T280 376 aaKnown RBP15.11■□□□□ 0.01
SNX3-204ENST00000426155 CDR2LQ86X02 465 aaPredicted RBP15.11■□□□□ 0.01
SNX3-204ENST00000426155 MCPH1Q8NEM0 835 aa15.11■□□□□ 0.01
SNX3-204ENST00000426155 LRRC15Q8TF66 581 aa15.11■□□□□ 0.01
SNX3-204ENST00000426155 KIFC3Q9BVG8 833 aa15.11■□□□□ 0.01
SNX3-204ENST00000426155 CWH43Q9H720 699 aa15.11■□□□□ 0.01
SNX3-204ENST00000426155 CHST12Q9NRB3 414 aa15.11■□□□□ 0.01
SNX3-204ENST00000426155 TYW1Q9NV66 732 aaKnown RBP15.11■□□□□ 0.01
SNX3-204ENST00000426155 DACT1Q9NYF0 836 aa15.11■□□□□ 0.01
SNX3-204ENST00000426155 ERLIN2O94905 339 aa15.1■□□□□ 0.01
SNX3-204ENST00000426155 EYA4O95677 639 aa15.1■□□□□ 0.01
SNX3-204ENST00000426155 EDN1P05305 212 aa15.1■□□□□ 0.01
SNX3-204ENST00000426155 ITGB1P05556 798 aa15.1■□□□□ 0.01
SNX3-204ENST00000426155 DNAJB1P25685 340 aa15.1■□□□□ 0.01
SNX3-204ENST00000426155 PTPAQ15257 358 aa15.1■□□□□ 0.01
SNX3-204ENST00000426155 FOXD4L5Q5VV16 416 aaPredicted RBP15.1■□□□□ 0.01
SNX3-204ENST00000426155 ARL6IP4Q66PJ3 421 aaKnown RBP15.1■□□□□ 0.01
SNX3-204ENST00000426155 IFNLR1Q8IU57 520 aaPredicted RBP15.1■□□□□ 0.01
SNX3-204ENST00000426155 KLHL23Q8NBE8 558 aa15.1■□□□□ 0.01
SNX3-204ENST00000426155 FOXD4L4Q8WXT5 416 aaPredicted RBP15.1■□□□□ 0.01
SNX3-204ENST00000426155 MRPL38Q96DV4 380 aaKnown RBP15.1■□□□□ 0.01
SNX3-204ENST00000426155 C11orf84Q9BUA3 381 aaPredicted RBP15.1■□□□□ 0.01
SNX3-204ENST00000426155 RUSC1Q9BVN2 902 aa15.1■□□□□ 0.01
SNX3-204ENST00000426155 EIF2AQ9BY44 585 aaKnown RBP15.1■□□□□ 0.01
SNX3-204ENST00000426155 TMEM117Q9H0C3 514 aa15.1■□□□□ 0.01
SNX3-204ENST00000426155 USP20Q9Y2K6 914 aa15.1■□□□□ 0.01
SNX3-204ENST00000426155 RWDD3Q9Y3V2 267 aa15.1■□□□□ 0.01
SNX3-204ENST00000426155 TCF20Q9UGU0 1960 aaKnown RBP15.09■□□□□ 0.01
SNX3-204ENST00000426155 TTLL13PA6NNM8 815 aa15.09■□□□□ 0.01
SNX3-204ENST00000426155 ARF4P18085 180 aaPredicted RBP15.09■□□□□ 0.01
SNX3-204ENST00000426155 MARCKSP29966 332 aaPredicted RBP15.09■□□□□ 0.01
SNX3-204ENST00000426155 TFF2Q03403 129 aa15.09■□□□□ 0.01
SNX3-204ENST00000426155 RAD51AP2Q09MP3 1159 aa15.09■□□□□ 0.01
SNX3-204ENST00000426155 CAMK1Q14012 370 aa15.09■□□□□ 0.01
SNX3-204ENST00000426155 HYIQ5T013 277 aa15.09■□□□□ 0.01
SNX3-204ENST00000426155 CDCA2Q69YH5 1023 aaPredicted RBP15.09■□□□□ 0.01
SNX3-204ENST00000426155 FAM43BQ6ZT52 329 aaPredicted RBP15.09■□□□□ 0.01
SNX3-204ENST00000426155 CABP7Q86V35 215 aa15.09■□□□□ 0.01
SNX3-204ENST00000426155 ABI1Q8IZP0 508 aa15.09■□□□□ 0.01
SNX3-204ENST00000426155 DAW1Q8N136 415 aa15.09■□□□□ 0.01
SNX3-204ENST00000426155 COLGALT1Q8NBJ5 622 aa15.09■□□□□ 0.01
SNX3-204ENST00000426155 USP28Q96RU2 1077 aa15.09■□□□□ 0.01
SNX3-204ENST00000426155 TRAIPQ9BWF2 469 aa15.09■□□□□ 0.01
SNX3-204ENST00000426155 PLAGL2Q9UPG8 496 aa15.09■□□□□ 0.01
SNX3-204ENST00000426155 DNM3Q9UQ16 869 aa15.09■□□□□ 0.01
SNX3-204ENST00000426155 INPP5FQ9Y2H2 1132 aa15.09■□□□□ 0.01
SNX3-204ENST00000426155 PCDHB2Q9Y5E7 798 aa15.09■□□□□ 0.01
SNX3-204ENST00000426155 PCDHGC5Q9Y5F6 944 aa15.09■□□□□ 0.01
SNX3-204ENST00000426155 STK24Q9Y6E0 443 aa15.09■□□□□ 0.01
SNX3-204ENST00000426155 HOXA2O43364 376 aa15.08■□□□□ 0
SNX3-204ENST00000426155 HIP1RO75146 1068 aa15.08■□□□□ 0
SNX3-204ENST00000426155 EOMESO95936 686 aa15.08■□□□□ 0
SNX3-204ENST00000426155 SSBP05455 408 aaKnown RBP eCLIP15.08■□□□□ 0
SNX3-204ENST00000426155 RB1P06400 928 aa15.08■□□□□ 0
SNX3-204ENST00000426155 LIG1P18858 919 aa15.08■□□□□ 0
SNX3-204ENST00000426155 AFF1P51825 1210 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms