RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 FAM204AQ9H8W3 233 aa12.56□□□□□ -0.4
UBR4-207ENST00000425413 TSKSQ9UJT2 592 aa12.56□□□□□ -0.4
UBR4-207ENST00000425413 TMEM110-MUSTN1A8MSY1 372 aa12.55□□□□□ -0.4
UBR4-207ENST00000425413 CALCAP01258 141 aa12.55□□□□□ -0.4
UBR4-207ENST00000425413 FAM153BP0C7A2 387 aa12.55□□□□□ -0.4
UBR4-207ENST00000425413 FAM153CQ494X1 144 aa12.55□□□□□ -0.4
UBR4-207ENST00000425413 SCYL3Q8IZE3 742 aa12.55□□□□□ -0.4
UBR4-207ENST00000425413 PPM1KQ8N3J5 372 aa12.55□□□□□ -0.4
UBR4-207ENST00000425413 KCTD17Q8N5Z5 321 aa12.55□□□□□ -0.4
UBR4-207ENST00000425413 XXYLT1Q8NBI6 393 aa12.55□□□□□ -0.4
UBR4-207ENST00000425413 BSNDQ8WZ55 320 aa12.55□□□□□ -0.4
UBR4-207ENST00000425413 INPP4AQ96PE3 977 aaPredicted RBP12.55□□□□□ -0.4
UBR4-207ENST00000425413 STRA6Q9BX79 667 aa12.55□□□□□ -0.4
UBR4-207ENST00000425413 ACBD3Q9H3P7 528 aa12.55□□□□□ -0.4
UBR4-207ENST00000425413 GGA3Q9NZ52 723 aa12.55□□□□□ -0.4
UBR4-207ENST00000425413 FAM153AQ9UHL3 310 aa12.55□□□□□ -0.4
UBR4-207ENST00000425413 DENND3A2RUS2 1198 aa12.55□□□□□ -0.4
UBR4-207ENST00000425413 GTPBP10A4D1E9 387 aaKnown RBP12.55□□□□□ -0.4
UBR4-207ENST00000425413 ZNF862O60290 1169 aa12.55□□□□□ -0.4
UBR4-207ENST00000425413 CLSTN1O94985 981 aa12.55□□□□□ -0.4
UBR4-207ENST00000425413 MUTP22033 750 aa12.55□□□□□ -0.4
UBR4-207ENST00000425413 TMEM132BQ14DG7 1078 aa12.55□□□□□ -0.4
UBR4-207ENST00000425413 DNAJC21Q5F1R6 531 aaKnown RBP12.55□□□□□ -0.4
UBR4-207ENST00000425413 METTL13Q8N6R0 699 aa12.55□□□□□ -0.4
UBR4-207ENST00000425413 GOLGA5Q8TBA6 731 aa12.55□□□□□ -0.4
UBR4-207ENST00000425413 SLC35G2Q8TBE7 412 aa12.55□□□□□ -0.4
UBR4-207ENST00000425413 THAP2Q9H0W7 228 aa12.55□□□□□ -0.4
UBR4-207ENST00000425413 SYF2O95926 243 aaKnown RBP12.54□□□□□ -0.4
UBR4-207ENST00000425413 DLATP10515 647 aaKnown RBP12.54□□□□□ -0.4
UBR4-207ENST00000425413 NPTX2P47972 431 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 LMBRD2Q68DH5 695 aaPredicted RBP12.54□□□□□ -0.4
UBR4-207ENST00000425413 LRRC57Q8N9N7 239 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 TSEN2Q8NCE0 465 aaKnown RBP12.54□□□□□ -0.4
UBR4-207ENST00000425413 AENQ8WTP8 325 aaKnown RBP12.54□□□□□ -0.4
UBR4-207ENST00000425413 SEPT9Q9UHD8 586 aaPredicted RBP12.54□□□□□ -0.4
UBR4-207ENST00000425413 GOLGA6BA6NDN3 693 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 ATMINO43313 823 aaPredicted RBP12.54□□□□□ -0.4
UBR4-207ENST00000425413 RAD51CO43502 376 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 BUB1BO60566 1050 aaPredicted RBP12.54□□□□□ -0.4
UBR4-207ENST00000425413 ITGA4P13612 1032 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 CCND2P30279 289 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 COPB2P35606 906 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 FSTL1Q12841 308 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 PPP2R5AQ15172 486 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 DCAF15Q66K64 600 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 CYFIP1Q7L576 1253 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 NIPA1Q7RTP0 329 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 CNKSR2Q8WXI2 1034 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 CTNNBL1Q8WYA6 563 aaPredicted RBP12.54□□□□□ -0.4
UBR4-207ENST00000425413 DDX47Q9H0S4 455 aaKnown RBP12.54□□□□□ -0.4
UBR4-207ENST00000425413 TMEM206Q9H813 350 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 DBR1Q9UK59 544 aaKnown RBP12.54□□□□□ -0.4
UBR4-207ENST00000425413 UBE4BO95155 1302 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 RGS20O76081 388 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 CAPN2P17655 700 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 ADSSP30520 456 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 MXI1P50539 228 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 ZNF211Q13398 564 aaPredicted RBP12.54□□□□□ -0.4
UBR4-207ENST00000425413 LLGL1Q15334 1064 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 C1orf220Q5T0J3 134 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 INTS8Q75QN2 995 aaKnown RBP12.54□□□□□ -0.4
UBR4-207ENST00000425413 VSIG10LQ86VR7 867 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 DDX42Q86XP3 938 aaKnown RBP eCLIP12.54□□□□□ -0.4
UBR4-207ENST00000425413 USP38Q8NB14 1042 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 NLGN2Q8NFZ4 835 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 OLIG1Q8TAK6 271 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 LMO3Q8TAP4 145 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 BICD1Q96G01 975 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 KMT5AQ9NQR1 393 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 PCDHA10Q9Y5I2 948 aa12.54□□□□□ -0.4
UBR4-207ENST00000425413 PSME4Q14997 1843 aa12.53□□□□□ -0.4
UBR4-207ENST00000425413 RPS12P25398 132 aaKnown RBP12.53□□□□□ -0.4
UBR4-207ENST00000425413 KRT76Q01546 638 aa12.53□□□□□ -0.4
UBR4-207ENST00000425413 HLTFQ14527 1009 aaKnown RBP eCLIP12.53□□□□□ -0.48e-7■□□□□ 10.3
UBR4-207ENST00000425413 SNRNP35Q16560 246 aaKnown RBP12.53□□□□□ -0.4
UBR4-207ENST00000425413 MTERF2Q49AM1 385 aa12.53□□□□□ -0.4
UBR4-207ENST00000425413 C10orf76Q5T2E6 689 aa12.53□□□□□ -0.4
UBR4-207ENST00000425413 ZNF572Q7Z3I7 529 aaPredicted RBP12.53□□□□□ -0.4
UBR4-207ENST00000425413 C4orf19Q8IY42 314 aa12.53□□□□□ -0.4
UBR4-207ENST00000425413 FAM71BQ8TC56 605 aa12.53□□□□□ -0.4
UBR4-207ENST00000425413 MOV10L1Q9BXT6 1211 aaKnown RBP12.53□□□□□ -0.4
UBR4-207ENST00000425413 TMEM117Q9H0C3 514 aa12.53□□□□□ -0.4
UBR4-207ENST00000425413 RABEP2Q9H5N1 569 aa12.53□□□□□ -0.4
UBR4-207ENST00000425413 FBXL5Q9UKA1 691 aa12.53□□□□□ -0.4
UBR4-207ENST00000425413 AGPSO00116 658 aa12.53□□□□□ -0.4
UBR4-207ENST00000425413 SGPL1O95470 568 aa12.53□□□□□ -0.4
UBR4-207ENST00000425413 CNGA1P29973 690 aa12.53□□□□□ -0.4
UBR4-207ENST00000425413 CNTN2Q02246 1040 aa12.53□□□□□ -0.4
UBR4-207ENST00000425413 CETN1Q12798 172 aa12.53□□□□□ -0.4
UBR4-207ENST00000425413 DMP1Q13316 513 aaPredicted RBP12.53□□□□□ -0.4
UBR4-207ENST00000425413 IFI16Q16666 785 aaKnown RBP12.53□□□□□ -0.4
UBR4-207ENST00000425413 CCDC60Q8IWA6 550 aaPredicted RBP12.53□□□□□ -0.4
UBR4-207ENST00000425413 POMGNT1Q8WZA1 660 aa12.53□□□□□ -0.4
UBR4-207ENST00000425413 SEMA4DQ92854 862 aa12.53□□□□□ -0.4
UBR4-207ENST00000425413 PI4K2AQ9BTU6 479 aa12.53□□□□□ -0.4
UBR4-207ENST00000425413 A1CFQ9NQ94 594 aaKnown RBP12.53□□□□□ -0.4
UBR4-207ENST00000425413 ZNF214Q9UL59 606 aaPredicted RBP12.53□□□□□ -0.4
UBR4-207ENST00000425413 TBX20Q9UMR3 447 aa12.53□□□□□ -0.4
UBR4-207ENST00000425413 MYH11P35749 1972 aa12.53□□□□□ -0.4
UBR4-207ENST00000425413 ZC3H4Q9UPT8 1303 aaKnown RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms