RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 JAKMIP1Q96N16 626 aaKnown RBP13.76□□□□□ -0.21
HLA-DQB3-203ENST00000425319 NAP1L4Q99733 375 aaKnown RBP13.76□□□□□ -0.21
HLA-DQB3-203ENST00000425319 FAM217BQ9NTX9 383 aaPredicted RBP13.76□□□□□ -0.21
HLA-DQB3-203ENST00000425319 FAM105AQ9NUU6 356 aa13.76□□□□□ -0.21
HLA-DQB3-203ENST00000425319 IGSF9Q9P2J2 1179 aa13.76□□□□□ -0.21
HLA-DQB3-203ENST00000425319 DOCK5Q9H7D0 1870 aa13.76□□□□□ -0.21
HLA-DQB3-203ENST00000425319 CNTNAP2Q9UHC6 1331 aa13.75□□□□□ -0.21
HLA-DQB3-203ENST00000425319 ZNF862O60290 1169 aa13.75□□□□□ -0.21
HLA-DQB3-203ENST00000425319 BAG4O95429 457 aaKnown RBP13.75□□□□□ -0.21
HLA-DQB3-203ENST00000425319 BRD1O95696 1058 aa13.75□□□□□ -0.21
HLA-DQB3-203ENST00000425319 GALTP07902 379 aa13.75□□□□□ -0.21
HLA-DQB3-203ENST00000425319 IFNAR1P17181 557 aa13.75□□□□□ -0.21
HLA-DQB3-203ENST00000425319 IRX6P78412 446 aaPredicted RBP13.75□□□□□ -0.21
HLA-DQB3-203ENST00000425319 ADCK5Q3MIX3 580 aa13.75□□□□□ -0.21
HLA-DQB3-203ENST00000425319 TMC5Q6UXY8 1006 aa13.75□□□□□ -0.21
HLA-DQB3-203ENST00000425319 C15orf39Q6ZRI6 1047 aa13.75□□□□□ -0.21
HLA-DQB3-203ENST00000425319 SRGAP1Q7Z6B7 1085 aa13.75□□□□□ -0.21
HLA-DQB3-203ENST00000425319 TBCKQ8TEA7 893 aa13.75□□□□□ -0.21
HLA-DQB3-203ENST00000425319 PHKBQ93100 1093 aa13.75□□□□□ -0.21
HLA-DQB3-203ENST00000425319 NLRP4Q96MN2 994 aa13.75□□□□□ -0.21
HLA-DQB3-203ENST00000425319 TMEM175Q9BSA9 504 aa13.75□□□□□ -0.21
HLA-DQB3-203ENST00000425319 ZBP1Q9H171 429 aa13.75□□□□□ -0.21
HLA-DQB3-203ENST00000425319 UNC45AQ9H3U1 944 aa13.75□□□□□ -0.21
HLA-DQB3-203ENST00000425319 RNF19AQ9NV58 838 aa13.75□□□□□ -0.21
HLA-DQB3-203ENST00000425319 PCDHA4Q9UN74 947 aa13.75□□□□□ -0.21
HLA-DQB3-203ENST00000425319 PIEZO1Q92508 2521 aa13.74□□□□□ -0.21
HLA-DQB3-203ENST00000425319 MYO7AQ13402 2215 aa13.74□□□□□ -0.21
HLA-DQB3-203ENST00000425319 GAS2O43903 313 aaKnown RBP13.74□□□□□ -0.21
HLA-DQB3-203ENST00000425319 MAFO75444 373 aaPredicted RBP13.74□□□□□ -0.21
HLA-DQB3-203ENST00000425319 ERLIN2O94905 339 aa13.74□□□□□ -0.21
HLA-DQB3-203ENST00000425319 REC8O95072 547 aa13.74□□□□□ -0.21
HLA-DQB3-203ENST00000425319 URODP06132 367 aa13.74□□□□□ -0.21
HLA-DQB3-203ENST00000425319 ADH1AP07327 375 aa13.74□□□□□ -0.21
HLA-DQB3-203ENST00000425319 PCBP1Q15365 356 aaKnown RBP eCLIP13.74□□□□□ -0.21
HLA-DQB3-203ENST00000425319 TARBP2Q15633 366 aaKnown RBP13.74□□□□□ -0.21
HLA-DQB3-203ENST00000425319 GPR149Q86SP6 731 aa13.74□□□□□ -0.21
HLA-DQB3-203ENST00000425319 RASEFQ8IZ41 740 aa13.74□□□□□ -0.21
HLA-DQB3-203ENST00000425319 C12orf76Q8N812 135 aaPredicted RBP13.74□□□□□ -0.21
HLA-DQB3-203ENST00000425319 KCNG4Q8TDN1 519 aa13.74□□□□□ -0.21
HLA-DQB3-203ENST00000425319 NXPE3Q969Y0 559 aa13.74□□□□□ -0.21
HLA-DQB3-203ENST00000425319 SEMA4AQ9H3S1 761 aa13.74□□□□□ -0.21
HLA-DQB3-203ENST00000425319 NRDE2Q9H7Z3 1164 aa13.74□□□□□ -0.21
HLA-DQB3-203ENST00000425319 PIDD1Q9HB75 910 aa13.74□□□□□ -0.21
HLA-DQB3-203ENST00000425319 TBC1D13Q9NVG8 400 aa13.74□□□□□ -0.21
HLA-DQB3-203ENST00000425319 VPS54Q9P1Q0 977 aa13.74□□□□□ -0.21
HLA-DQB3-203ENST00000425319 CSDE1O75534 798 aaKnown RBP13.73□□□□□ -0.21
HLA-DQB3-203ENST00000425319 OFD1O75665 1012 aa13.73□□□□□ -0.21
HLA-DQB3-203ENST00000425319 PSMD10O75832 226 aa13.73□□□□□ -0.21
HLA-DQB3-203ENST00000425319 DEXIO95424 95 aa13.73□□□□□ -0.21
HLA-DQB3-203ENST00000425319 PDGFBP01127 241 aaPredicted RBP13.73□□□□□ -0.21
HLA-DQB3-203ENST00000425319 ASGR2P07307 311 aa13.73□□□□□ -0.21
HLA-DQB3-203ENST00000425319 WEE2P0C1S8 567 aa13.73□□□□□ -0.21
HLA-DQB3-203ENST00000425319 ITGA4P13612 1032 aa13.73□□□□□ -0.21
HLA-DQB3-203ENST00000425319 GBP2P32456 591 aaPredicted RBP13.73□□□□□ -0.21
HLA-DQB3-203ENST00000425319 RFC5P40937 340 aa13.73□□□□□ -0.21
HLA-DQB3-203ENST00000425319 NBL1P41271 181 aa13.73□□□□□ -0.21
HLA-DQB3-203ENST00000425319 QARSP47897 775 aaKnown RBP13.73□□□□□ -0.21
HLA-DQB3-203ENST00000425319 LONRF3Q496Y0 759 aa13.73□□□□□ -0.21
HLA-DQB3-203ENST00000425319 MOXD1Q6UVY6 613 aa13.73□□□□□ -0.21
HLA-DQB3-203ENST00000425319 CENPQQ7L2Z9 268 aaPredicted RBP13.73□□□□□ -0.21
HLA-DQB3-203ENST00000425319 KRT25Q7Z3Z0 450 aa13.73□□□□□ -0.21
HLA-DQB3-203ENST00000425319 BLIDQ8IZY5 108 aa13.73□□□□□ -0.21
HLA-DQB3-203ENST00000425319 FBXL16Q8N461 479 aa13.73□□□□□ -0.21
HLA-DQB3-203ENST00000425319 SLC22A17Q8WUG5 538 aa13.73□□□□□ -0.21
HLA-DQB3-203ENST00000425319 PSPC1Q8WXF1 523 aaKnown RBP13.73□□□□□ -0.21
HLA-DQB3-203ENST00000425319 CEP170P1Q96L14 293 aa13.73□□□□□ -0.21
HLA-DQB3-203ENST00000425319 FAM20AQ96MK3 541 aa13.73□□□□□ -0.21
HLA-DQB3-203ENST00000425319 KLHL5Q96PQ7 755 aa13.73□□□□□ -0.21
HLA-DQB3-203ENST00000425319 RSAD1Q9HA92 442 aa13.73□□□□□ -0.21
HLA-DQB3-203ENST00000425319 PCDHB2Q9Y5E7 798 aa13.73□□□□□ -0.21
HLA-DQB3-203ENST00000425319 CYP3A7-CYP3A51PA0A087WV96 503 aa13.72□□□□□ -0.21
HLA-DQB3-203ENST00000425319 IGKV6-21A0A0C4DH24 114 aa13.72□□□□□ -0.21
HLA-DQB3-203ENST00000425319 CCDC194A0A1B0GVG4 234 aa13.72□□□□□ -0.21
HLA-DQB3-203ENST00000425319 SSBP05455 408 aaKnown RBP eCLIP13.72□□□□□ -0.21
HLA-DQB3-203ENST00000425319 P4HBP07237 508 aaKnown RBP13.72□□□□□ -0.21
HLA-DQB3-203ENST00000425319 SRGAP2CP0DJJ0 459 aa13.72□□□□□ -0.21
HLA-DQB3-203ENST00000425319 EPCAMP16422 314 aa13.72□□□□□ -0.21
HLA-DQB3-203ENST00000425319 CYP3A7P24462 503 aa13.72□□□□□ -0.21
HLA-DQB3-203ENST00000425319 AXLP30530 894 aa13.72□□□□□ -0.21
HLA-DQB3-203ENST00000425319 AK2P54819 239 aa13.72□□□□□ -0.21
HLA-DQB3-203ENST00000425319 TFDP1Q14186 410 aa13.72□□□□□ -0.21
HLA-DQB3-203ENST00000425319 LETM2Q2VYF4 491 aa13.72□□□□□ -0.21
HLA-DQB3-203ENST00000425319 AUTS2Q8WXX7 1259 aa13.72□□□□□ -0.21
HLA-DQB3-203ENST00000425319 LPPQ93052 612 aa13.72□□□□□ -0.21
HLA-DQB3-203ENST00000425319 CCDC43Q96MW1 224 aaKnown RBP13.72□□□□□ -0.21
HLA-DQB3-203ENST00000425319 COLEC11Q9BWP8 271 aa13.72□□□□□ -0.21
HLA-DQB3-203ENST00000425319 TRIM6Q9C030 488 aaPredicted RBP13.72□□□□□ -0.21
HLA-DQB3-203ENST00000425319 DDX25Q9UHL0 483 aaKnown RBP13.72□□□□□ -0.21
HLA-DQB3-203ENST00000425319 COL4A3BPQ9Y5P4 624 aa13.72□□□□□ -0.21
HLA-DQB3-203ENST00000425319 CDKL5O76039 1030 aa13.71□□□□□ -0.21
HLA-DQB3-203ENST00000425319 GCFC2P16383 781 aaKnown RBP13.71□□□□□ -0.21
HLA-DQB3-203ENST00000425319 RPS6KB1P23443 525 aa13.71□□□□□ -0.21
HLA-DQB3-203ENST00000425319 OR1G1P47890 313 aa13.71□□□□□ -0.21
HLA-DQB3-203ENST00000425319 SLC11A1P49279 550 aa13.71□□□□□ -0.21
HLA-DQB3-203ENST00000425319 CCT2P78371 535 aaKnown RBP13.71□□□□□ -0.21
HLA-DQB3-203ENST00000425319 CREMQ03060 361 aa13.71□□□□□ -0.21
HLA-DQB3-203ENST00000425319 COL9A3Q14050 684 aaPredicted RBP13.71□□□□□ -0.21
HLA-DQB3-203ENST00000425319 MXD4Q14582 209 aaPredicted RBP13.71□□□□□ -0.21
HLA-DQB3-203ENST00000425319 UGCGQ16739 394 aa13.71□□□□□ -0.21
HLA-DQB3-203ENST00000425319 TMEM105Q8N8V8 129 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms