RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 INPP4AQ96PE3 977 aaPredicted RBP11.6□□□□□ -0.55
CUX1-205ENST00000425244 ZNF577Q9BSK1 485 aa11.6□□□□□ -0.55
CUX1-205ENST00000425244 TEX13BQ9BXU2 312 aa11.6□□□□□ -0.55
CUX1-205ENST00000425244 ASCC2Q9H1I8 757 aaPredicted RBP11.6□□□□□ -0.55
CUX1-205ENST00000425244 EFCC1Q9HA90 598 aa11.6□□□□□ -0.55
CUX1-205ENST00000425244 SIX2Q9NPC8 291 aa11.6□□□□□ -0.55
CUX1-205ENST00000425244 FAM153AQ9UHL3 310 aa11.6□□□□□ -0.55
CUX1-205ENST00000425244 LCMT1Q9UIC8 334 aa11.6□□□□□ -0.55
CUX1-205ENST00000425244 CEP350Q5VT06 3117 aa11.6□□□□□ -0.55
CUX1-205ENST00000425244 PTPRFP10586 1907 aa11.6□□□□□ -0.55
CUX1-205ENST00000425244 ARP10275 920 aa11.6□□□□□ -0.55
CUX1-205ENST00000425244 CYP2C8P10632 490 aa11.6□□□□□ -0.55
CUX1-205ENST00000425244 PSMC2P35998 433 aaKnown RBP11.6□□□□□ -0.55
CUX1-205ENST00000425244 PPIL2Q13356 520 aa11.6□□□□□ -0.55
CUX1-205ENST00000425244 GLE1Q53GS7 698 aaKnown RBP11.6□□□□□ -0.55
CUX1-205ENST00000425244 TTC19Q6DKK2 380 aaPredicted RBP11.6□□□□□ -0.55
CUX1-205ENST00000425244 C1orf186Q6ZWK4 172 aa11.6□□□□□ -0.55
CUX1-205ENST00000425244 HS2ST1Q7LGA3 356 aa11.6□□□□□ -0.55
CUX1-205ENST00000425244 TRMT1LQ7Z2T5 733 aaKnown RBP11.6□□□□□ -0.55
CUX1-205ENST00000425244 NCAPG2Q86XI2 1143 aa11.6□□□□□ -0.55
CUX1-205ENST00000425244 MCF2L2Q86YR7 1114 aa11.6□□□□□ -0.55
CUX1-205ENST00000425244 BANK1Q8NDB2 785 aa11.6□□□□□ -0.55
CUX1-205ENST00000425244 RUBCNQ92622 972 aa11.6□□□□□ -0.55
CUX1-205ENST00000425244 CCDC43Q96MW1 224 aaKnown RBP11.6□□□□□ -0.55
CUX1-205ENST00000425244 AP1M1Q9BXS5 423 aa11.6□□□□□ -0.55
CUX1-205ENST00000425244 OLFML3Q9NRN5 406 aa11.6□□□□□ -0.55
CUX1-205ENST00000425244 SEPT11Q9NVA2 429 aaKnown RBP11.6□□□□□ -0.55
CUX1-205ENST00000425244 BTBD7Q9P203 1132 aa11.6□□□□□ -0.55
CUX1-205ENST00000425244 WRAP73Q9P2S5 460 aaPredicted RBP11.6□□□□□ -0.55
CUX1-205ENST00000425244 ZMYM2Q9UBW7 1377 aa11.59□□□□□ -0.55
CUX1-205ENST00000425244 PSMD10O75832 226 aa11.59□□□□□ -0.55
CUX1-205ENST00000425244 KIF4AO95239 1232 aa11.59□□□□□ -0.55
CUX1-205ENST00000425244 H2AFZP0C0S5 128 aa11.59□□□□□ -0.55
CUX1-205ENST00000425244 PAK2Q13177 524 aa11.59□□□□□ -0.55
CUX1-205ENST00000425244 GRM1Q13255 1194 aa11.59□□□□□ -0.55
CUX1-205ENST00000425244 CEP55Q53EZ4 464 aa11.59□□□□□ -0.55
CUX1-205ENST00000425244 LDLRAD1Q5T700 205 aa11.59□□□□□ -0.55
CUX1-205ENST00000425244 H2AFVQ71UI9 128 aa11.59□□□□□ -0.55
CUX1-205ENST00000425244 SYCP3Q8IZU3 236 aa11.59□□□□□ -0.55
CUX1-205ENST00000425244 SYTL5Q8TDW5 730 aaPredicted RBP11.59□□□□□ -0.55
CUX1-205ENST00000425244 RMDN3Q96TC7 470 aa11.59□□□□□ -0.55
CUX1-205ENST00000425244 UNC45AQ9H3U1 944 aa11.59□□□□□ -0.55
CUX1-205ENST00000425244 TUFT1Q9NNX1 390 aa11.59□□□□□ -0.55
CUX1-205ENST00000425244 RAD51CO43502 376 aa11.59□□□□□ -0.55
CUX1-205ENST00000425244 KCNA4P22459 653 aa11.59□□□□□ -0.55
CUX1-205ENST00000425244 TNNC1P63316 161 aa11.59□□□□□ -0.55
CUX1-205ENST00000425244 HLTFQ14527 1009 aaKnown RBP eCLIP11.59□□□□□ -0.55
CUX1-205ENST00000425244 IFI16Q16666 785 aaKnown RBP11.59□□□□□ -0.55
CUX1-205ENST00000425244 C10orf76Q5T2E6 689 aa11.59□□□□□ -0.55
CUX1-205ENST00000425244 KCTD16Q68DU8 428 aa11.59□□□□□ -0.55
CUX1-205ENST00000425244 PEX26Q7Z412 305 aa11.59□□□□□ -0.55
CUX1-205ENST00000425244 USP38Q8NB14 1042 aa11.59□□□□□ -0.55
CUX1-205ENST00000425244 REPS2Q8NFH8 660 aa11.59□□□□□ -0.55
CUX1-205ENST00000425244 CASKIN2Q8WXE0 1202 aa11.59□□□□□ -0.55
CUX1-205ENST00000425244 ARL8AQ96BM9 186 aa11.59□□□□□ -0.55
CUX1-205ENST00000425244 R3HDMLQ9H3Y0 253 aa11.59□□□□□ -0.55
CUX1-205ENST00000425244 FRMD4BQ9Y2L6 1034 aa11.59□□□□□ -0.55
CUX1-205ENST00000425244 ARHGEF35A5YM69 484 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 DDX3XO00571 662 aaKnown RBP eCLIP11.58□□□□□ -0.561e-8■■□□□ 13.3
CUX1-205ENST00000425244 CXCL11O14625 94 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 OPA1O60313 960 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 ABCB4P21439 1286 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 STAT1P42224 750 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 HSD17B4P51659 736 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 ARHGEF16Q5VV41 709 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 CST9Q5W186 159 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 DAAM2Q86T65 1068 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 GLYCTKQ8IVS8 523 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 ANKRD35Q8N283 1001 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 SLC5A5Q92911 643 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 LXNQ9BS40 222 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 RLFQ13129 1914 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 TESPA1A2RU30 521 aaPredicted RBP11.58□□□□□ -0.56
CUX1-205ENST00000425244 EIF3DO15371 548 aaKnown RBP eCLIP11.58□□□□□ -0.56
CUX1-205ENST00000425244 EVI5O60447 810 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 SORBS3O60504 671 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 KRT14P02533 472 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 HUNKP57058 714 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 JAM2P57087 298 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 PPP2R5CQ13362 524 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 SNAPC2Q13487 334 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 ARHGAP44Q17R89 818 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 CFAP58Q5T655 872 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 TPCN2Q8NHX9 752 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 CAVIN3Q969G5 261 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 ZIM3Q96PE6 472 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 NACC1Q96RE7 527 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 WDR11Q9BZH6 1224 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 EHMT1Q9H9B1 1298 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 GDF3Q9NR23 364 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 DNAJC12Q9UKB3 198 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 AGTPBP1Q9UPW5 1226 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 PARP14Q460N5 1801 aa11.58□□□□□ -0.56
CUX1-205ENST00000425244 GOLGA8KD6RF30 607 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 ANKRD65E5RJM6 399 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 EXOC3O60645 756 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 LRRN2O75325 713 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 FERP16591 822 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 PRKCIP41743 596 aa11.57□□□□□ -0.56
CUX1-205ENST00000425244 FMO5P49326 533 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms