RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 GLRA2P23416 452 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 ACLYP53396 1101 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 NCBP1Q09161 790 aaKnown RBP11.35□□□□□ -0.59
MDC1-205ENST00000425072 ADAM9Q13443 819 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 NCAPHQ15003 741 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 NFIL3Q16649 462 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 NBPF20Q3BBV1 942 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 FILIP1LQ4L180 1135 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 ZC2HC1CQ53FD0 456 aaPredicted RBP11.35□□□□□ -0.59
MDC1-205ENST00000425072 MARCH8Q5T0T0 291 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 TTI2Q6NXR4 508 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 TAF2Q6P1X5 1199 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 CXCL17Q6UXB2 119 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 FILIP1Q7Z7B0 1213 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 RSPH3Q86UC2 560 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 SESTD1Q86VW0 696 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 RHPN2Q8IUC4 686 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 NELFCDQ8IXH7 590 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 TMEM161BQ8NDZ6 487 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 SH3TC2Q8TF17 1288 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 TMEM174Q8WUU8 243 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 TRAPPC12Q8WVT3 735 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 CEP63Q96MT8 703 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 FIZ1Q96SL8 496 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 NFKBIZQ9BYH8 718 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 INO80BQ9C086 356 aaPredicted RBP11.35□□□□□ -0.59
MDC1-205ENST00000425072 MCOLN1Q9GZU1 580 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 RNF208Q9H0X6 261 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 TBX20Q9UMR3 447 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 AKT3Q9Y243 479 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 ARID2Q68CP9 1835 aa11.35□□□□□ -0.59
MDC1-205ENST00000425072 MYADML2A6NDP7 307 aa11.34□□□□□ -0.59
MDC1-205ENST00000425072 LRRC10BA6NIK2 292 aa11.34□□□□□ -0.59
MDC1-205ENST00000425072 CBFA2T2O43439 604 aa11.34□□□□□ -0.59
MDC1-205ENST00000425072 PPP1R37O75864 691 aa11.34□□□□□ -0.59
MDC1-205ENST00000425072 TPM3P06753 285 aa11.34□□□□□ -0.59
MDC1-205ENST00000425072 CYP2C9P11712 490 aa11.34□□□□□ -0.59
MDC1-205ENST00000425072 CCL5P13501 91 aa11.34□□□□□ -0.59
MDC1-205ENST00000425072 PHKA2P46019 1235 aa11.34□□□□□ -0.59
MDC1-205ENST00000425072 SOX10P56693 466 aa11.34□□□□□ -0.59
MDC1-205ENST00000425072 ADAM17P78536 824 aa11.34□□□□□ -0.59
MDC1-205ENST00000425072 PLCB2Q00722 1185 aa11.34□□□□□ -0.59
MDC1-205ENST00000425072 PCBP1Q15365 356 aaKnown RBP eCLIP11.34□□□□□ -0.59
MDC1-205ENST00000425072 SLFN12LQ6IEE8 588 aa11.34□□□□□ -0.59
MDC1-205ENST00000425072 KIAA0319LQ8IZA0 1049 aa11.34□□□□□ -0.59
MDC1-205ENST00000425072 LRRC71Q8N4P6 559 aa11.34□□□□□ -0.59
MDC1-205ENST00000425072 RNF149Q8NC42 400 aa11.34□□□□□ -0.59
MDC1-205ENST00000425072 LMBR1Q8WVP7 490 aa11.34□□□□□ -0.59
MDC1-205ENST00000425072 UNC93B1Q9H1C4 597 aa11.34□□□□□ -0.59
MDC1-205ENST00000425072 KCTD10Q9H3F6 313 aa11.34□□□□□ -0.59
MDC1-205ENST00000425072 PAK6Q9NQU5 681 aaPredicted RBP11.34□□□□□ -0.59
MDC1-205ENST00000425072 ARHGAP28Q9P2N2 729 aa11.34□□□□□ -0.59
MDC1-205ENST00000425072 HDAC6Q9UBN7 1215 aa11.34□□□□□ -0.59
MDC1-205ENST00000425072 KIAA0391O15091 583 aaKnown RBP11.33□□□□□ -0.6
MDC1-205ENST00000425072 SERPINC1P01008 464 aa11.33□□□□□ -0.6
MDC1-205ENST00000425072 TFRCP02786 760 aaKnown RBP11.33□□□□□ -0.6
MDC1-205ENST00000425072 EEF1GP26641 437 aaKnown RBP11.33□□□□□ -0.6
MDC1-205ENST00000425072 CASP5P51878 434 aa11.33□□□□□ -0.6
MDC1-205ENST00000425072 PTENP60484 403 aa11.33□□□□□ -0.6
MDC1-205ENST00000425072 IRX5P78411 483 aaPredicted RBP11.33□□□□□ -0.6
MDC1-205ENST00000425072 ITGA7Q13683 1181 aa11.33□□□□□ -0.6
MDC1-205ENST00000425072 MAPK6Q16659 721 aa11.33□□□□□ -0.6
MDC1-205ENST00000425072 FAM47CQ5HY64 1035 aa11.33□□□□□ -0.6
MDC1-205ENST00000425072 SARM1Q6SZW1 724 aa11.33□□□□□ -0.6
MDC1-205ENST00000425072 SRGAP1Q7Z6B7 1085 aa11.33□□□□□ -0.6
MDC1-205ENST00000425072 ZNF410Q86VK4 478 aa11.33□□□□□ -0.6
MDC1-205ENST00000425072 CREBRFQ8IUR6 639 aa11.33□□□□□ -0.6
MDC1-205ENST00000425072 SLC9A9Q8IVB4 645 aa11.33□□□□□ -0.6
MDC1-205ENST00000425072 LINC01465Q8N7H1 131 aa11.33□□□□□ -0.6
MDC1-205ENST00000425072 GLIS3Q8NEA6 775 aa11.33□□□□□ -0.6
MDC1-205ENST00000425072 ASAP3Q8TDY4 903 aa11.33□□□□□ -0.6
MDC1-205ENST00000425072 MED15Q96RN5 788 aa11.33□□□□□ -0.6
MDC1-205ENST00000425072 DUSP9Q99956 384 aaKnown RBP11.33□□□□□ -0.6
MDC1-205ENST00000425072 GCOM2Q9BZD3 368 aaPredicted RBP11.33□□□□□ -0.6
MDC1-205ENST00000425072 TRIM5Q9C035 493 aa11.33□□□□□ -0.6
MDC1-205ENST00000425072 METTL14Q9HCE5 456 aaKnown RBP11.33□□□□□ -0.6
MDC1-205ENST00000425072 SAMSN1Q9NSI8 373 aaKnown RBP11.33□□□□□ -0.6
MDC1-205ENST00000425072 GTF2IRD1Q9UHL9 959 aa11.33□□□□□ -0.6
MDC1-205ENST00000425072 FRMD4BQ9Y2L6 1034 aa11.33□□□□□ -0.6
MDC1-205ENST00000425072 A0A0C4DFX4 3053 aa11.33□□□□□ -0.6
MDC1-205ENST00000425072 TRIM49BA6NDI0 452 aa11.32□□□□□ -0.6
MDC1-205ENST00000425072 M0QZ92 97 aa11.32□□□□□ -0.6
MDC1-205ENST00000425072 DNM1LO00429 736 aa11.32□□□□□ -0.6
MDC1-205ENST00000425072 TGFB1I1O43294 461 aa11.32□□□□□ -0.6
MDC1-205ENST00000425072 SGPL1O95470 568 aa11.32□□□□□ -0.6
MDC1-205ENST00000425072 LDHAP00338 332 aaKnown RBP11.32□□□□□ -0.6
MDC1-205ENST00000425072 ZNF18P17022 549 aa11.32□□□□□ -0.6
MDC1-205ENST00000425072 GARTP22102 1010 aa11.32□□□□□ -0.6
MDC1-205ENST00000425072 HOXC8P31273 242 aa11.32□□□□□ -0.6
MDC1-205ENST00000425072 HOXD13P35453 343 aa11.32□□□□□ -0.6
MDC1-205ENST00000425072 CLCN3P51790 818 aa11.32□□□□□ -0.6
MDC1-205ENST00000425072 PMS1P54277 932 aaKnown RBP11.32□□□□□ -0.6
MDC1-205ENST00000425072 UBASH3AP57075 661 aa11.32□□□□□ -0.6
MDC1-205ENST00000425072 NLRP11P59045 1033 aaKnown RBP11.32□□□□□ -0.6
MDC1-205ENST00000425072 CAPSQ13938 189 aa11.32□□□□□ -0.6
MDC1-205ENST00000425072 CDKAL1Q5VV42 579 aa11.32□□□□□ -0.6
MDC1-205ENST00000425072 ZPBP2Q6X784 338 aa11.32□□□□□ -0.6
MDC1-205ENST00000425072 RPAINQ86UA6 219 aa11.32□□□□□ -0.6
MDC1-205ENST00000425072 MAP4K3Q8IVH8 894 aa11.32□□□□□ -0.6
MDC1-205ENST00000425072 C12orf56Q8IXR9 622 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms