RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 AGPAT5Q9NUQ2 364 aa19.85■□□□□ 0.77
GPC1-203ENST00000425056 CARNS1A5YM72 827 aa19.84■□□□□ 0.77
GPC1-203ENST00000425056 FAM205CA6NFA0 338 aa19.84■□□□□ 0.77
GPC1-203ENST00000425056 GAS2O43903 313 aaKnown RBP19.84■□□□□ 0.77
GPC1-203ENST00000425056 ZNF623O75123 536 aa19.84■□□□□ 0.77
GPC1-203ENST00000425056 KRT2P35908 639 aa19.84■□□□□ 0.77
GPC1-203ENST00000425056 ALDH7A1P49419 539 aaKnown RBP19.84■□□□□ 0.77
GPC1-203ENST00000425056 NR5A1Q13285 461 aa19.84■□□□□ 0.77
GPC1-203ENST00000425056 SMC1AQ14683 1233 aaKnown RBP19.84■□□□□ 0.77
GPC1-203ENST00000425056 ANKRD54Q6NXT1 300 aa19.84■□□□□ 0.77
GPC1-203ENST00000425056 SLFN12Q8IYM2 578 aa19.84■□□□□ 0.77
GPC1-203ENST00000425056 PSPC1Q8WXF1 523 aaKnown RBP19.84■□□□□ 0.77
GPC1-203ENST00000425056 LPPQ93052 612 aa19.84■□□□□ 0.77
GPC1-203ENST00000425056 GTF3C6Q969F1 213 aa19.84■□□□□ 0.77
GPC1-203ENST00000425056 S1PR5Q9H228 398 aa19.84■□□□□ 0.77
GPC1-203ENST00000425056 ZC3H11AO75152 810 aaKnown RBP eCLIP19.83■□□□□ 0.77
GPC1-203ENST00000425056 LARGE1O95461 756 aa19.83■□□□□ 0.77
GPC1-203ENST00000425056 HOXD11P31277 338 aaPredicted RBP19.83■□□□□ 0.77
GPC1-203ENST00000425056 YWHABP31946 246 aaKnown RBP19.83■□□□□ 0.77
GPC1-203ENST00000425056 TECP42680 631 aa19.83■□□□□ 0.77
GPC1-203ENST00000425056 NCAPH2Q6IBW4 605 aa19.83■□□□□ 0.77
GPC1-203ENST00000425056 SYCE2Q6PIF2 218 aa19.83■□□□□ 0.77
GPC1-203ENST00000425056 GLB1LQ6UWU2 654 aa19.83■□□□□ 0.77
GPC1-203ENST00000425056 HFE2Q6ZVN8 426 aa19.83■□□□□ 0.77
GPC1-203ENST00000425056 SRGAP1Q7Z6B7 1085 aa19.83■□□□□ 0.77
GPC1-203ENST00000425056 MRPL43Q8N983 215 aaKnown RBP19.83■□□□□ 0.77
GPC1-203ENST00000425056 TMEM169Q96HH4 297 aa19.83■□□□□ 0.77
GPC1-203ENST00000425056 BRMS1Q9HCU9 246 aa19.83■□□□□ 0.77
GPC1-203ENST00000425056 TBC1D13Q9NVG8 400 aa19.83■□□□□ 0.77
GPC1-203ENST00000425056 PPP4R2Q9NY27 417 aa19.83■□□□□ 0.77
GPC1-203ENST00000425056 RGL1Q9NZL6 768 aa19.83■□□□□ 0.77
GPC1-203ENST00000425056 C2orf71A6NGG8 1288 aa19.82■□□□□ 0.76
GPC1-203ENST00000425056 MEIS3P2A8K0S8 358 aa19.82■□□□□ 0.76
GPC1-203ENST00000425056 NT5C1B-RDH14C9J2C7 533 aa19.82■□□□□ 0.76
GPC1-203ENST00000425056 MARCH6O60337 910 aa19.82■□□□□ 0.76
GPC1-203ENST00000425056 HOXB8P17481 243 aaPredicted RBP19.82■□□□□ 0.76
GPC1-203ENST00000425056 EMC2Q15006 297 aa19.82■□□□□ 0.76
GPC1-203ENST00000425056 ME3Q16798 604 aa19.82■□□□□ 0.76
GPC1-203ENST00000425056 NOMO2Q5JPE7 1267 aa19.82■□□□□ 0.76
GPC1-203ENST00000425056 LLGL2Q6P1M3 1020 aa19.82■□□□□ 0.76
GPC1-203ENST00000425056 TMEM173Q86WV6 379 aaPredicted RBP19.82■□□□□ 0.76
GPC1-203ENST00000425056 NECAB1Q8N987 351 aa19.82■□□□□ 0.76
GPC1-203ENST00000425056 PRPF31Q8WWY3 499 aaKnown RBP19.82■□□□□ 0.76
GPC1-203ENST00000425056 EDAQ92838 391 aa19.82■□□□□ 0.76
GPC1-203ENST00000425056 CASP10Q92851 521 aa19.82■□□□□ 0.76
GPC1-203ENST00000425056 TMEM143Q96AN5 459 aa19.82■□□□□ 0.76
GPC1-203ENST00000425056 DYDC2Q96IM9 177 aa19.82■□□□□ 0.76
GPC1-203ENST00000425056 ZSWIM4Q9H7M6 989 aa19.82■□□□□ 0.76
GPC1-203ENST00000425056 HCFC2Q9Y5Z7 792 aa19.82■□□□□ 0.76
GPC1-203ENST00000425056 WDFY4Q6ZS81 3184 aa19.82■□□□□ 0.76
GPC1-203ENST00000425056 BAG4O95429 457 aaKnown RBP19.81■□□□□ 0.76
GPC1-203ENST00000425056 CYP4A11Q02928 519 aa19.81■□□□□ 0.76
GPC1-203ENST00000425056 LAMTOR4Q0VGL1 99 aa19.81■□□□□ 0.76
GPC1-203ENST00000425056 LONRF3Q496Y0 759 aa19.81■□□□□ 0.76
GPC1-203ENST00000425056 OTUD6AQ7L8S5 288 aa19.81■□□□□ 0.76
GPC1-203ENST00000425056 NSUN7Q8NE18 718 aaKnown RBP19.81■□□□□ 0.76
GPC1-203ENST00000425056 TCP11Q8WWU5 503 aa19.81■□□□□ 0.76
GPC1-203ENST00000425056 ZBP1Q9H171 429 aa19.81■□□□□ 0.76
GPC1-203ENST00000425056 NRDE2Q9H7Z3 1164 aa19.81■□□□□ 0.76
GPC1-203ENST00000425056 MINDY3Q9H8M7 445 aa19.81■□□□□ 0.76
GPC1-203ENST00000425056 BMP2KQ9NSY1 1161 aaPredicted RBP19.81■□□□□ 0.76
GPC1-203ENST00000425056 INPP5FQ9Y2H2 1132 aa19.81■□□□□ 0.76
GPC1-203ENST00000425056 OFD1O75665 1012 aa19.8■□□□□ 0.76
GPC1-203ENST00000425056 CTTNQ14247 550 aaKnown RBP19.8■□□□□ 0.76
GPC1-203ENST00000425056 FERMT3Q86UX7 667 aa19.8■□□□□ 0.76
GPC1-203ENST00000425056 VPS52Q8N1B4 723 aa19.8■□□□□ 0.76
GPC1-203ENST00000425056 PGBD4Q96DM1 585 aa19.8■□□□□ 0.76
GPC1-203ENST00000425056 IGSF21Q96ID5 467 aa19.8■□□□□ 0.76
GPC1-203ENST00000425056 RPGRIP1Q96KN7 1286 aa19.8■□□□□ 0.76
GPC1-203ENST00000425056 KCNH6Q9H252 994 aa19.8■□□□□ 0.76
GPC1-203ENST00000425056 PCDHB2Q9Y5E7 798 aa19.8■□□□□ 0.76
GPC1-203ENST00000425056 IRAK3Q9Y616 596 aa19.8■□□□□ 0.76
GPC1-203ENST00000425056 ASAP2O43150 1006 aa19.79■□□□□ 0.76
GPC1-203ENST00000425056 CLASP2O75122 1294 aaKnown RBP19.79■□□□□ 0.76
GPC1-203ENST00000425056 LYPLA2O95372 231 aa19.79■□□□□ 0.76
GPC1-203ENST00000425056 GALTP07902 379 aa19.79■□□□□ 0.76
GPC1-203ENST00000425056 SRGAP2CP0DJJ0 459 aa19.79■□□□□ 0.76
GPC1-203ENST00000425056 HOXA11P31270 313 aaPredicted RBP19.79■□□□□ 0.76
GPC1-203ENST00000425056 BMS1Q14692 1282 aaKnown RBP19.79■□□□□ 0.76
GPC1-203ENST00000425056 TPRNQ4KMQ1 711 aa19.79■□□□□ 0.76
GPC1-203ENST00000425056 XKR9Q5GH70 373 aa19.79■□□□□ 0.76
GPC1-203ENST00000425056 AGMOQ6ZNB7 445 aa19.79■□□□□ 0.76
GPC1-203ENST00000425056 MRPL10Q7Z7H8 261 aaKnown RBP19.79■□□□□ 0.76
GPC1-203ENST00000425056 DDX53Q86TM3 631 aaKnown RBP19.79■□□□□ 0.76
GPC1-203ENST00000425056 RNF149Q8NC42 400 aa19.79■□□□□ 0.76
GPC1-203ENST00000425056 BCL7CQ8WUZ0 217 aaPredicted RBP19.79■□□□□ 0.76
GPC1-203ENST00000425056 MTRQ99707 1265 aa19.79■□□□□ 0.76
GPC1-203ENST00000425056 XPNPEP1Q9NQW7 623 aa19.79■□□□□ 0.76
GPC1-203ENST00000425056 CNTNAP2Q9UHC6 1331 aa19.78■□□□□ 0.76
GPC1-203ENST00000425056 ZBTB39O15060 712 aa19.78■□□□□ 0.76
GPC1-203ENST00000425056 B4GALT3O60512 393 aa19.78■□□□□ 0.76
GPC1-203ENST00000425056 SLITRK3O94933 977 aa19.78■□□□□ 0.76
GPC1-203ENST00000425056 CTSAP10619 480 aa19.78■□□□□ 0.76
GPC1-203ENST00000425056 ZXDAP98168 799 aa19.78■□□□□ 0.76
GPC1-203ENST00000425056 RNASELQ05823 741 aaKnown RBP19.78■□□□□ 0.76
GPC1-203ENST00000425056 PCBP1Q15365 356 aaKnown RBP eCLIP19.78■□□□□ 0.76
GPC1-203ENST00000425056 CALCRLQ16602 461 aa19.78■□□□□ 0.76
GPC1-203ENST00000425056 UBXN11Q5T124 520 aa19.78■□□□□ 0.76
GPC1-203ENST00000425056 ERICH6BQ5W0A0 696 aa19.78■□□□□ 0.76
GPC1-203ENST00000425056 TRIM67Q6ZTA4 783 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms