RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 INTS9Q9NV88 658 aaKnown RBP13.95□□□□□ -0.18
TOP2B-203ENST00000424225 ATF5Q9Y2D1 282 aaPredicted RBP13.95□□□□□ -0.18
TOP2B-203ENST00000424225 FRMPD4Q14CM0 1322 aa13.95□□□□□ -0.18
TOP2B-203ENST00000424225 CCDC188H7C350 402 aa13.95□□□□□ -0.18
TOP2B-203ENST00000424225 VIMP08670 466 aaKnown RBP13.95□□□□□ -0.18
TOP2B-203ENST00000424225 IVDP26440 423 aa13.95□□□□□ -0.18
TOP2B-203ENST00000424225 TNNI2P48788 182 aa13.95□□□□□ -0.18
TOP2B-203ENST00000424225 PRPF4BQ13523 1007 aaKnown RBP13.95□□□□□ -0.18
TOP2B-203ENST00000424225 SPDYE1Q8NFV5 336 aaPredicted RBP13.95□□□□□ -0.18
TOP2B-203ENST00000424225 LMO3Q8TAP4 145 aa13.95□□□□□ -0.18
TOP2B-203ENST00000424225 LENG9Q96B70 501 aa13.95□□□□□ -0.18
TOP2B-203ENST00000424225 FIZ1Q96SL8 496 aa13.95□□□□□ -0.18
TOP2B-203ENST00000424225 EYA3Q99504 573 aa13.95□□□□□ -0.18
TOP2B-203ENST00000424225 LBHD1Q9BQE6 289 aaPredicted RBP13.95□□□□□ -0.18
TOP2B-203ENST00000424225 C6orf50Q9HD87 102 aa13.95□□□□□ -0.18
TOP2B-203ENST00000424225 PTPN22Q9Y2R2 807 aa13.95□□□□□ -0.18
TOP2B-203ENST00000424225 CTNNA2P26232 953 aa13.94□□□□□ -0.18
TOP2B-203ENST00000424225 BLMHQ13867 455 aa13.94□□□□□ -0.18
TOP2B-203ENST00000424225 EXOC3L4Q17RC7 722 aa13.94□□□□□ -0.18
TOP2B-203ENST00000424225 PCDHB18PQ96TA0 734 aa13.94□□□□□ -0.18
TOP2B-203ENST00000424225 DDX25Q9UHL0 483 aaKnown RBP13.94□□□□□ -0.18
TOP2B-203ENST00000424225 TRAF3IP3Q9Y228 551 aa13.94□□□□□ -0.18
TOP2B-203ENST00000424225 UTP11Q9Y3A2 253 aaKnown RBP13.94□□□□□ -0.18
TOP2B-203ENST00000424225 TISP43B9A030 160 aa13.94□□□□□ -0.18
TOP2B-203ENST00000424225 LGR5O75473 907 aa13.94□□□□□ -0.18
TOP2B-203ENST00000424225 GCAP28676 217 aa13.94□□□□□ -0.18
TOP2B-203ENST00000424225 PPP1R2P41236 205 aa13.94□□□□□ -0.18
TOP2B-203ENST00000424225 ZKSCAN8Q15776 578 aaPredicted RBP13.94□□□□□ -0.18
TOP2B-203ENST00000424225 KAT5Q92993 513 aa13.94□□□□□ -0.18
TOP2B-203ENST00000424225 CD101Q93033 1021 aa13.94□□□□□ -0.18
TOP2B-203ENST00000424225 GCNT4Q9P109 453 aa13.94□□□□□ -0.18
TOP2B-203ENST00000424225 A0A0A6YYK5 440 aaPredicted RBP13.94□□□□□ -0.18
TOP2B-203ENST00000424225 TMEM120BA0PK00 339 aa13.94□□□□□ -0.18
TOP2B-203ENST00000424225 ANKRD33BA6NCL7 494 aa13.94□□□□□ -0.18
TOP2B-203ENST00000424225 PEX11AO75192 247 aa13.94□□□□□ -0.18
TOP2B-203ENST00000424225 MSH2P43246 934 aa13.94□□□□□ -0.18
TOP2B-203ENST00000424225 EVA1CP58658 441 aa13.94□□□□□ -0.18
TOP2B-203ENST00000424225 RHBDL3P58872 404 aa13.94□□□□□ -0.18
TOP2B-203ENST00000424225 COPS2P61201 443 aa13.94□□□□□ -0.18
TOP2B-203ENST00000424225 DLG4P78352 724 aa13.94□□□□□ -0.18
TOP2B-203ENST00000424225 IFFO1Q0D2I5 559 aa13.94□□□□□ -0.18
TOP2B-203ENST00000424225 C16orf86Q6ZW13 317 aa13.94□□□□□ -0.18
TOP2B-203ENST00000424225 ADGRF4Q8IZF3 695 aa13.94□□□□□ -0.18
TOP2B-203ENST00000424225 TTC8Q8TAM2 541 aa13.94□□□□□ -0.18
TOP2B-203ENST00000424225 CRYGNQ8WXF5 182 aa13.94□□□□□ -0.18
TOP2B-203ENST00000424225 ZNF622Q969S3 477 aaKnown RBP eCLIP13.94□□□□□ -0.182e-7■■■□□ 16.4
TOP2B-203ENST00000424225 GPCPD1Q9NPB8 672 aa13.94□□□□□ -0.18
TOP2B-203ENST00000424225 CCNG1P51959 295 aa13.93□□□□□ -0.18
TOP2B-203ENST00000424225 SNAP25P60880 206 aa13.93□□□□□ -0.18
TOP2B-203ENST00000424225 MTMR3Q13615 1198 aa13.93□□□□□ -0.18
TOP2B-203ENST00000424225 NEK9Q8TD19 979 aa13.93□□□□□ -0.18
TOP2B-203ENST00000424225 ART4Q93070 314 aa13.93□□□□□ -0.18
TOP2B-203ENST00000424225 SPAG5Q96R06 1193 aa13.93□□□□□ -0.18
TOP2B-203ENST00000424225 CNOT10Q9H9A5 744 aaKnown RBP13.93□□□□□ -0.18
TOP2B-203ENST00000424225 FAM114A2Q9NRY5 505 aa13.93□□□□□ -0.18
TOP2B-203ENST00000424225 ALG6Q9Y672 507 aa13.93□□□□□ -0.18
TOP2B-203ENST00000424225 O00370 1275 aa13.93□□□□□ -0.18
TOP2B-203ENST00000424225 IRF6O14896 467 aa13.93□□□□□ -0.18
TOP2B-203ENST00000424225 AFPP02771 609 aaKnown RBP13.93□□□□□ -0.18
TOP2B-203ENST00000424225 H2AFZP0C0S5 128 aa13.93□□□□□ -0.18
TOP2B-203ENST00000424225 CCNB1P14635 433 aa13.93□□□□□ -0.18
TOP2B-203ENST00000424225 ZNF746Q6NUN9 644 aaPredicted RBP13.93□□□□□ -0.18
TOP2B-203ENST00000424225 H2AFVQ71UI9 128 aa13.93□□□□□ -0.18
TOP2B-203ENST00000424225 SLC7A6OSQ96CW6 309 aaPredicted RBP13.93□□□□□ -0.18
TOP2B-203ENST00000424225 NUCKS1Q9H1E3 243 aaKnown RBP13.93□□□□□ -0.18
TOP2B-203ENST00000424225 DAAM1Q9Y4D1 1078 aa13.93□□□□□ -0.18
TOP2B-203ENST00000424225 MYO3BQ8WXR4 1341 aa13.93□□□□□ -0.18
TOP2B-203ENST00000424225 TRIM49P0CI25 452 aa13.93□□□□□ -0.18
TOP2B-203ENST00000424225 TRIM49CP0CI26 452 aa13.93□□□□□ -0.18
TOP2B-203ENST00000424225 PABPC4Q13310 644 aaKnown RBP eCLIP13.93□□□□□ -0.18
TOP2B-203ENST00000424225 KRT79Q5XKE5 535 aa13.93□□□□□ -0.18
TOP2B-203ENST00000424225 RHBDF2Q6PJF5 856 aa13.93□□□□□ -0.18
TOP2B-203ENST00000424225 NRG4Q8WWG1 115 aa13.93□□□□□ -0.18
TOP2B-203ENST00000424225 YIPF3Q9GZM5 350 aa13.93□□□□□ -0.18
TOP2B-203ENST00000424225 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.93□□□□□ -0.187e-7■■■■■ 69.5
TOP2B-203ENST00000424225 WRAP73Q9P2S5 460 aaPredicted RBP13.93□□□□□ -0.18
TOP2B-203ENST00000424225 ESYT2A0FGR8 921 aa13.92□□□□□ -0.18
TOP2B-203ENST00000424225 SIGLEC16A6NMB1 481 aa13.92□□□□□ -0.18
TOP2B-203ENST00000424225 USP17L10C9JJH3 530 aa13.92□□□□□ -0.18
TOP2B-203ENST00000424225 SNHG28P0DPA3 235 aa13.92□□□□□ -0.18
TOP2B-203ENST00000424225 WDR4P57081 412 aaKnown RBP13.92□□□□□ -0.18
TOP2B-203ENST00000424225 BIRC2Q13490 618 aa13.92□□□□□ -0.18
TOP2B-203ENST00000424225 RBM26Q5T8P6 1007 aaKnown RBP13.92□□□□□ -0.18
TOP2B-203ENST00000424225 LINC00116Q8NCU8 138 aa13.92□□□□□ -0.18
TOP2B-203ENST00000424225 NEDD1Q8NHV4 660 aa13.92□□□□□ -0.18
TOP2B-203ENST00000424225 UCMAQ8WVF2 138 aa13.92□□□□□ -0.18
TOP2B-203ENST00000424225 TSG101Q99816 390 aa13.92□□□□□ -0.18
TOP2B-203ENST00000424225 TRIM7Q9C029 511 aa13.92□□□□□ -0.18
TOP2B-203ENST00000424225 DHX36Q9H2U1 1008 aaKnown RBP13.92□□□□□ -0.18
TOP2B-203ENST00000424225 CDC42EP4Q9H3Q1 356 aaKnown RBP13.92□□□□□ -0.18
TOP2B-203ENST00000424225 EURLQ9NYK6 297 aa13.92□□□□□ -0.18
TOP2B-203ENST00000424225 USP15Q9Y4E8 981 aaPredicted RBP13.92□□□□□ -0.18
TOP2B-203ENST00000424225 FOXN3O00409 490 aaPredicted RBP13.92□□□□□ -0.18
TOP2B-203ENST00000424225 EML1O00423 815 aa13.92□□□□□ -0.18
TOP2B-203ENST00000424225 ACSL3O95573 720 aa13.92□□□□□ -0.18
TOP2B-203ENST00000424225 CCDC50Q8IVM0 306 aa13.92□□□□□ -0.18
TOP2B-203ENST00000424225 SLCO1B3Q9NPD5 702 aa13.92□□□□□ -0.18
TOP2B-203ENST00000424225 SRP68Q9UHB9 627 aaKnown RBP13.92□□□□□ -0.18
TOP2B-203ENST00000424225 CHKBQ9Y259 395 aa13.92□□□□□ -0.18
TOP2B-203ENST00000424225 LOC102724428A0A0B4J2F2 783 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms