RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 CES5AQ6NT32 575 aa18.09■□□□□ 0.49
COL18A1-205ENST00000423214 ANO5Q75V66 913 aa18.09■□□□□ 0.49
COL18A1-205ENST00000423214 LPPQ93052 612 aa18.09■□□□□ 0.49
COL18A1-205ENST00000423214 PBXIP1Q96AQ6 731 aa18.09■□□□□ 0.49
COL18A1-205ENST00000423214 FAM20AQ96MK3 541 aa18.09■□□□□ 0.49
COL18A1-205ENST00000423214 NAP1L4Q99733 375 aaKnown RBP18.09■□□□□ 0.49
COL18A1-205ENST00000423214 PHF20Q9BVI0 1012 aa18.09■□□□□ 0.49
COL18A1-205ENST00000423214 CYP26B1Q9NR63 512 aa18.09■□□□□ 0.49
COL18A1-205ENST00000423214 TSHZ2Q9NRE2 1034 aa18.09■□□□□ 0.49
COL18A1-205ENST00000423214 FAM105AQ9NUU6 356 aa18.09■□□□□ 0.49
COL18A1-205ENST00000423214 NR2E1Q9Y466 385 aa18.09■□□□□ 0.49
COL18A1-205ENST00000423214 PLXNA3P51805 1871 aa18.08■□□□□ 0.49
COL18A1-205ENST00000423214 C2orf71A6NGG8 1288 aa18.08■□□□□ 0.48
COL18A1-205ENST00000423214 CCNT1O60563 726 aaKnown RBP18.08■□□□□ 0.48
COL18A1-205ENST00000423214 SIGLEC14Q08ET2 396 aa18.08■□□□□ 0.48
COL18A1-205ENST00000423214 SCRN1Q12765 414 aa18.08■□□□□ 0.48
COL18A1-205ENST00000423214 NOMO2Q5JPE7 1267 aa18.08■□□□□ 0.48
COL18A1-205ENST00000423214 ERICH6BQ5W0A0 696 aa18.08■□□□□ 0.48
COL18A1-205ENST00000423214 SYCE2Q6PIF2 218 aa18.08■□□□□ 0.48
COL18A1-205ENST00000423214 BMP8AQ7Z5Y6 402 aa18.08■□□□□ 0.48
COL18A1-205ENST00000423214 KSR1Q8IVT5 923 aa18.08■□□□□ 0.48
COL18A1-205ENST00000423214 EXOC8Q8IYI6 725 aa18.08■□□□□ 0.48
COL18A1-205ENST00000423214 CEP170P1Q96L14 293 aa18.08■□□□□ 0.48
COL18A1-205ENST00000423214 TRAIPQ9BWF2 469 aa18.08■□□□□ 0.48
COL18A1-205ENST00000423214 S1PR5Q9H228 398 aa18.08■□□□□ 0.48
COL18A1-205ENST00000423214 KCNMB3Q9NPA1 279 aa18.08■□□□□ 0.48
COL18A1-205ENST00000423214 COL4A3BPQ9Y5P4 624 aa18.08■□□□□ 0.48
COL18A1-205ENST00000423214 HCFC2Q9Y5Z7 792 aa18.08■□□□□ 0.48
COL18A1-205ENST00000423214 EML1O00423 815 aa18.07■□□□□ 0.48
COL18A1-205ENST00000423214 P4HBP07237 508 aaKnown RBP18.07■□□□□ 0.48
COL18A1-205ENST00000423214 RFC5P40937 340 aa18.07■□□□□ 0.48
COL18A1-205ENST00000423214 PTPN21Q16825 1174 aa18.07■□□□□ 0.48
COL18A1-205ENST00000423214 PPP4R3AQ6IN85 833 aa18.07■□□□□ 0.48
COL18A1-205ENST00000423214 PIK3AP1Q6ZUJ8 805 aa18.07■□□□□ 0.48
COL18A1-205ENST00000423214 VPS52Q8N1B4 723 aa18.07■□□□□ 0.48
COL18A1-205ENST00000423214 MRPL43Q8N983 215 aaKnown RBP18.07■□□□□ 0.48
COL18A1-205ENST00000423214 URGCPQ8TCY9 931 aa18.07■□□□□ 0.48
COL18A1-205ENST00000423214 PSPC1Q8WXF1 523 aaKnown RBP18.07■□□□□ 0.48
COL18A1-205ENST00000423214 PGBD4Q96DM1 585 aa18.07■□□□□ 0.48
COL18A1-205ENST00000423214 LXNQ9BS40 222 aa18.07■□□□□ 0.48
COL18A1-205ENST00000423214 GBP3Q9H0R5 595 aa18.07■□□□□ 0.48
COL18A1-205ENST00000423214 BMP2KQ9NSY1 1161 aaPredicted RBP18.07■□□□□ 0.48
COL18A1-205ENST00000423214 AGPAT5Q9NUQ2 364 aa18.07■□□□□ 0.48
COL18A1-205ENST00000423214 TBC1D13Q9NVG8 400 aa18.07■□□□□ 0.48
COL18A1-205ENST00000423214 VAV3Q9UKW4 847 aa18.07■□□□□ 0.48
COL18A1-205ENST00000423214 PPME1Q9Y570 386 aa18.07■□□□□ 0.48
COL18A1-205ENST00000423214 CXCL14O95715 111 aa18.06■□□□□ 0.48
COL18A1-205ENST00000423214 MRE11P49959 708 aa18.06■□□□□ 0.48
COL18A1-205ENST00000423214 NPEPPSP55786 919 aa18.06■□□□□ 0.48
COL18A1-205ENST00000423214 ITIH3Q06033 890 aa18.06■□□□□ 0.48
COL18A1-205ENST00000423214 NCAPH2Q6IBW4 605 aa18.06■□□□□ 0.48
COL18A1-205ENST00000423214 POTEDQ86YR6 584 aa18.06■□□□□ 0.48
COL18A1-205ENST00000423214 NECTIN4Q96NY8 510 aa18.06■□□□□ 0.48
COL18A1-205ENST00000423214 ZBP1Q9H171 429 aa18.06■□□□□ 0.48
COL18A1-205ENST00000423214 DZANK1Q9NVP4 752 aa18.06■□□□□ 0.48
COL18A1-205ENST00000423214 MTCL1Q9Y4B5 1905 aaKnown RBP18.06■□□□□ 0.48
COL18A1-205ENST00000423214 SPDYE4A6NLX3 237 aa18.05■□□□□ 0.48
COL18A1-205ENST00000423214 TBX3O15119 743 aa18.05■□□□□ 0.48
COL18A1-205ENST00000423214 GAS2O43903 313 aaKnown RBP18.05■□□□□ 0.48
COL18A1-205ENST00000423214 CLASP2O75122 1294 aaKnown RBP18.05■□□□□ 0.48
COL18A1-205ENST00000423214 GIT2Q14161 759 aa18.05■□□□□ 0.48
COL18A1-205ENST00000423214 TMEM173Q86WV6 379 aaPredicted RBP18.05■□□□□ 0.48
COL18A1-205ENST00000423214 FBXL6Q8N531 539 aa18.05■□□□□ 0.48
COL18A1-205ENST00000423214 TCP11Q8WWU5 503 aa18.05■□□□□ 0.48
COL18A1-205ENST00000423214 AUTS2Q8WXX7 1259 aa18.05■□□□□ 0.48
COL18A1-205ENST00000423214 WASF1Q92558 559 aa18.05■□□□□ 0.48
COL18A1-205ENST00000423214 IGSF21Q96ID5 467 aa18.05■□□□□ 0.48
COL18A1-205ENST00000423214 RIPOR3Q96MK2 946 aa18.05■□□□□ 0.48
COL18A1-205ENST00000423214 PRRX2Q99811 253 aa18.05■□□□□ 0.48
COL18A1-205ENST00000423214 POMKQ9H5K3 350 aa18.05■□□□□ 0.48
COL18A1-205ENST00000423214 NRDE2Q9H7Z3 1164 aa18.05■□□□□ 0.48
COL18A1-205ENST00000423214 BRMS1Q9HCU9 246 aa18.05■□□□□ 0.48
COL18A1-205ENST00000423214 MEIS3P2A8K0S8 358 aa18.04■□□□□ 0.48
COL18A1-205ENST00000423214 ERLIN2O94905 339 aa18.04■□□□□ 0.48
COL18A1-205ENST00000423214 BAG4O95429 457 aaKnown RBP18.04■□□□□ 0.48
COL18A1-205ENST00000423214 SRGAP2CP0DJJ0 459 aa18.04■□□□□ 0.48
COL18A1-205ENST00000423214 CTSAP10619 480 aa18.04■□□□□ 0.48
COL18A1-205ENST00000423214 YWHABP31946 246 aaKnown RBP18.04■□□□□ 0.48
COL18A1-205ENST00000423214 MTHFRP42898 656 aa18.04■□□□□ 0.48
COL18A1-205ENST00000423214 EMC2Q15006 297 aa18.04■□□□□ 0.48
COL18A1-205ENST00000423214 ANKRD1Q15327 319 aa18.04■□□□□ 0.48
COL18A1-205ENST00000423214 EPHA7Q15375 998 aa18.04■□□□□ 0.48
COL18A1-205ENST00000423214 RARS2Q5T160 578 aaKnown RBP18.04■□□□□ 0.48
COL18A1-205ENST00000423214 OTUD6AQ7L8S5 288 aa18.04■□□□□ 0.48
COL18A1-205ENST00000423214 SRGAP1Q7Z6B7 1085 aa18.04■□□□□ 0.48
COL18A1-205ENST00000423214 DDX53Q86TM3 631 aaKnown RBP18.04■□□□□ 0.48
COL18A1-205ENST00000423214 SLFN12Q8IYM2 578 aa18.04■□□□□ 0.48
COL18A1-205ENST00000423214 TMEM143Q96AN5 459 aa18.04■□□□□ 0.48
COL18A1-205ENST00000423214 FAM193BQ96PV7 902 aaPredicted RBP18.04■□□□□ 0.48
COL18A1-205ENST00000423214 ADAM7Q9H2U9 754 aa18.04■□□□□ 0.48
COL18A1-205ENST00000423214 DHX33Q9H6R0 707 aaKnown RBP18.04■□□□□ 0.48
COL18A1-205ENST00000423214 RSAD1Q9HA92 442 aa18.04■□□□□ 0.48
COL18A1-205ENST00000423214 IFT122Q9HBG6 1241 aa18.04■□□□□ 0.48
COL18A1-205ENST00000423214 WRAP73Q9P2S5 460 aaPredicted RBP18.04■□□□□ 0.48
COL18A1-205ENST00000423214 DNAJB4Q9UDY4 337 aa18.04■□□□□ 0.48
COL18A1-205ENST00000423214 CDH22Q9UJ99 828 aa18.04■□□□□ 0.48
COL18A1-205ENST00000423214 PCDHB2Q9Y5E7 798 aa18.04■□□□□ 0.48
COL18A1-205ENST00000423214 CNTNAP2Q9UHC6 1331 aa18.03■□□□□ 0.48
COL18A1-205ENST00000423214 PFKFB2O60825 505 aa18.03■□□□□ 0.48
COL18A1-205ENST00000423214 ZNF623O75123 536 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms