RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 NT5C1B-RDH14C9J2C7 533 aa20.67■□□□□ 0.9
SREBF1-206ENST00000423161 ZC3H11AO75152 810 aaKnown RBP eCLIP20.67■□□□□ 0.9
SREBF1-206ENST00000423161 BAG4O95429 457 aaKnown RBP20.67■□□□□ 0.9
SREBF1-206ENST00000423161 KRT2P35908 639 aa20.67■□□□□ 0.9
SREBF1-206ENST00000423161 RFC5P40937 340 aa20.67■□□□□ 0.9
SREBF1-206ENST00000423161 RAB27AP51159 221 aa20.67■□□□□ 0.9
SREBF1-206ENST00000423161 SMC1AQ14683 1233 aaKnown RBP20.67■□□□□ 0.9
SREBF1-206ENST00000423161 ANKRD54Q6NXT1 300 aa20.67■□□□□ 0.9
SREBF1-206ENST00000423161 C4orf19Q8IY42 314 aa20.67■□□□□ 0.9
SREBF1-206ENST00000423161 SLFN12Q8IYM2 578 aa20.67■□□□□ 0.9
SREBF1-206ENST00000423161 NECAB1Q8N987 351 aa20.67■□□□□ 0.9
SREBF1-206ENST00000423161 PSPC1Q8WXF1 523 aaKnown RBP20.67■□□□□ 0.9
SREBF1-206ENST00000423161 SUSD6Q92537 303 aa20.67■□□□□ 0.9
SREBF1-206ENST00000423161 TMEM143Q96AN5 459 aa20.67■□□□□ 0.9
SREBF1-206ENST00000423161 TMEM169Q96HH4 297 aa20.67■□□□□ 0.9
SREBF1-206ENST00000423161 DYDC2Q96IM9 177 aa20.67■□□□□ 0.9
SREBF1-206ENST00000423161 DHX33Q9H6R0 707 aaKnown RBP20.67■□□□□ 0.9
SREBF1-206ENST00000423161 BMP2KQ9NSY1 1161 aaPredicted RBP20.67■□□□□ 0.9
SREBF1-206ENST00000423161 PPP4R2Q9NY27 417 aa20.67■□□□□ 0.9
SREBF1-206ENST00000423161 RGL1Q9NZL6 768 aa20.67■□□□□ 0.9
SREBF1-206ENST00000423161 LARGE1O95461 756 aa20.66■□□□□ 0.9
SREBF1-206ENST00000423161 FDPSP14324 419 aaKnown RBP20.66■□□□□ 0.9
SREBF1-206ENST00000423161 YWHABP31946 246 aaKnown RBP20.66■□□□□ 0.9
SREBF1-206ENST00000423161 CA8P35219 290 aa20.66■□□□□ 0.9
SREBF1-206ENST00000423161 SPIRE1Q08AE8 756 aa20.66■□□□□ 0.9
SREBF1-206ENST00000423161 CBX2Q14781 532 aaPredicted RBP20.66■□□□□ 0.9
SREBF1-206ENST00000423161 ME3Q16798 604 aa20.66■□□□□ 0.9
SREBF1-206ENST00000423161 GLB1LQ6UWU2 654 aa20.66■□□□□ 0.9
SREBF1-206ENST00000423161 PRPF31Q8WWY3 499 aaKnown RBP20.66■□□□□ 0.9
SREBF1-206ENST00000423161 GTF3C6Q969F1 213 aa20.66■□□□□ 0.9
SREBF1-206ENST00000423161 RPGRIP1Q96KN7 1286 aa20.66■□□□□ 0.9
SREBF1-206ENST00000423161 AGPAT5Q9NUQ2 364 aa20.66■□□□□ 0.9
SREBF1-206ENST00000423161 INPP5FQ9Y2H2 1132 aa20.66■□□□□ 0.9
SREBF1-206ENST00000423161 MEIS3P2A8K0S8 358 aa20.65■□□□□ 0.9
SREBF1-206ENST00000423161 GAS2O43903 313 aaKnown RBP20.65■□□□□ 0.9
SREBF1-206ENST00000423161 ZNF623O75123 536 aa20.65■□□□□ 0.9
SREBF1-206ENST00000423161 SRGAP2CP0DJJ0 459 aa20.65■□□□□ 0.9
SREBF1-206ENST00000423161 CYP4A11Q02928 519 aa20.65■□□□□ 0.9
SREBF1-206ENST00000423161 CTTNQ14247 550 aaKnown RBP20.65■□□□□ 0.9
SREBF1-206ENST00000423161 EMC2Q15006 297 aa20.65■□□□□ 0.9
SREBF1-206ENST00000423161 XKR9Q5GH70 373 aa20.65■□□□□ 0.9
SREBF1-206ENST00000423161 NOMO2Q5JPE7 1267 aa20.65■□□□□ 0.9
SREBF1-206ENST00000423161 SYCE2Q6PIF2 218 aa20.65■□□□□ 0.9
SREBF1-206ENST00000423161 OTUD6AQ7L8S5 288 aa20.65■□□□□ 0.9
SREBF1-206ENST00000423161 SRGAP1Q7Z6B7 1085 aa20.65■□□□□ 0.9
SREBF1-206ENST00000423161 TNFRSF25Q93038 417 aa20.65■□□□□ 0.9
SREBF1-206ENST00000423161 APOL5Q9BWW9 433 aa20.65■□□□□ 0.9
SREBF1-206ENST00000423161 S1PR5Q9H228 398 aa20.65■□□□□ 0.9
SREBF1-206ENST00000423161 ZSWIM4Q9H7M6 989 aa20.65■□□□□ 0.9
SREBF1-206ENST00000423161 TBC1D13Q9NVG8 400 aa20.65■□□□□ 0.9
SREBF1-206ENST00000423161 TDRD15B5MCY1 1934 aaKnown RBP20.65■□□□□ 0.9
SREBF1-206ENST00000423161 CARNS1A5YM72 827 aa20.64■□□□□ 0.89
SREBF1-206ENST00000423161 C2orf71A6NGG8 1288 aa20.64■□□□□ 0.89
SREBF1-206ENST00000423161 RNASELQ05823 741 aaKnown RBP20.64■□□□□ 0.89
SREBF1-206ENST00000423161 LAMTOR4Q0VGL1 99 aa20.64■□□□□ 0.89
SREBF1-206ENST00000423161 BMS1Q14692 1282 aaKnown RBP20.64■□□□□ 0.89
SREBF1-206ENST00000423161 HFE2Q6ZVN8 426 aa20.64■□□□□ 0.89
SREBF1-206ENST00000423161 TMEM173Q86WV6 379 aaPredicted RBP20.64■□□□□ 0.89
SREBF1-206ENST00000423161 MRPL43Q8N983 215 aaKnown RBP20.64■□□□□ 0.89
SREBF1-206ENST00000423161 TCP11Q8WWU5 503 aa20.64■□□□□ 0.89
SREBF1-206ENST00000423161 EDAQ92838 391 aa20.64■□□□□ 0.89
SREBF1-206ENST00000423161 CASP10Q92851 521 aa20.64■□□□□ 0.89
SREBF1-206ENST00000423161 PGBD4Q96DM1 585 aa20.64■□□□□ 0.89
SREBF1-206ENST00000423161 NRDE2Q9H7Z3 1164 aa20.64■□□□□ 0.89
SREBF1-206ENST00000423161 MINDY3Q9H8M7 445 aa20.64■□□□□ 0.89
SREBF1-206ENST00000423161 PCDHB2Q9Y5E7 798 aa20.64■□□□□ 0.89
SREBF1-206ENST00000423161 ZBTB39O15060 712 aa20.63■□□□□ 0.89
SREBF1-206ENST00000423161 OFD1O75665 1012 aa20.63■□□□□ 0.89
SREBF1-206ENST00000423161 HOXB8P17481 243 aaPredicted RBP20.63■□□□□ 0.89
SREBF1-206ENST00000423161 FOSBP53539 338 aa20.63■□□□□ 0.89
SREBF1-206ENST00000423161 TPH2Q8IWU9 490 aa20.63■□□□□ 0.89
SREBF1-206ENST00000423161 VPS52Q8N1B4 723 aa20.63■□□□□ 0.89
SREBF1-206ENST00000423161 NSUN7Q8NE18 718 aaKnown RBP20.63■□□□□ 0.89
SREBF1-206ENST00000423161 MTRQ99707 1265 aa20.63■□□□□ 0.89
SREBF1-206ENST00000423161 GBP3Q9H0R5 595 aa20.63■□□□□ 0.89
SREBF1-206ENST00000423161 ZBP1Q9H171 429 aa20.63■□□□□ 0.89
SREBF1-206ENST00000423161 HCFC2Q9Y5Z7 792 aa20.63■□□□□ 0.89
SREBF1-206ENST00000423161 MYO10Q9HD67 2058 aa20.62■□□□□ 0.89
SREBF1-206ENST00000423161 CXCL14O95715 111 aa20.62■□□□□ 0.89
SREBF1-206ENST00000423161 HOXD11P31277 338 aaPredicted RBP20.62■□□□□ 0.89
SREBF1-206ENST00000423161 CALCRLQ16602 461 aa20.62■□□□□ 0.89
SREBF1-206ENST00000423161 TPRNQ4KMQ1 711 aa20.62■□□□□ 0.89
SREBF1-206ENST00000423161 FERMT3Q86UX7 667 aa20.62■□□□□ 0.89
SREBF1-206ENST00000423161 RNF149Q8NC42 400 aa20.62■□□□□ 0.89
SREBF1-206ENST00000423161 URGCPQ8TCY9 931 aa20.62■□□□□ 0.89
SREBF1-206ENST00000423161 IGSF21Q96ID5 467 aa20.62■□□□□ 0.89
SREBF1-206ENST00000423161 EIF2AK1Q9BQI3 630 aaKnown RBP20.62■□□□□ 0.89
SREBF1-206ENST00000423161 DNAJB4Q9UDY4 337 aa20.62■□□□□ 0.89
SREBF1-206ENST00000423161 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.61■□□□□ 0.89
SREBF1-206ENST00000423161 BTBD18B2RXH4 712 aa20.61■□□□□ 0.89
SREBF1-206ENST00000423161 ASAP2O43150 1006 aa20.61■□□□□ 0.89
SREBF1-206ENST00000423161 JAK2O60674 1132 aa20.61■□□□□ 0.89
SREBF1-206ENST00000423161 CLASP2O75122 1294 aaKnown RBP20.61■□□□□ 0.89
SREBF1-206ENST00000423161 GALTP07902 379 aa20.61■□□□□ 0.89
SREBF1-206ENST00000423161 NEK4P51957 841 aa20.61■□□□□ 0.89
SREBF1-206ENST00000423161 AGMOQ6ZNB7 445 aa20.61■□□□□ 0.89
SREBF1-206ENST00000423161 DDX53Q86TM3 631 aaKnown RBP20.61■□□□□ 0.89
SREBF1-206ENST00000423161 DIS3L2Q8IYB7 885 aaKnown RBP20.61■□□□□ 0.89
SREBF1-206ENST00000423161 BCL7CQ8WUZ0 217 aaPredicted RBP20.61■□□□□ 0.89
SREBF1-206ENST00000423161 AUTS2Q8WXX7 1259 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms