RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 GPC2Q8N158 579 aa14.99□□□□□ -0.01
CDCA3-202ENST00000422785 OLIG1Q8TAK6 271 aa14.99□□□□□ -0.01
CDCA3-202ENST00000422785 ATP6V0A1Q93050 837 aa14.99□□□□□ -0.01
CDCA3-202ENST00000422785 A1CFQ9NQ94 594 aaKnown RBP14.99□□□□□ -0.01
CDCA3-202ENST00000422785 GABBR1Q9UBS5 961 aa14.99□□□□□ -0.01
CDCA3-202ENST00000422785 PHLDB3Q6NSJ2 640 aa14.98□□□□□ -0.01
CDCA3-202ENST00000422785 LRRC57Q8N9N7 239 aa14.98□□□□□ -0.01
CDCA3-202ENST00000422785 TMEM161BQ8NDZ6 487 aa14.98□□□□□ -0.01
CDCA3-202ENST00000422785 U2AF1L4Q8WU68 220 aaKnown RBP14.98□□□□□ -0.01
CDCA3-202ENST00000422785 SYT11Q9BT88 431 aa14.98□□□□□ -0.01
CDCA3-202ENST00000422785 LRRC1Q9BTT6 524 aa14.98□□□□□ -0.01
CDCA3-202ENST00000422785 SMARCAL1Q9NZC9 954 aa14.98□□□□□ -0.01
CDCA3-202ENST00000422785 EHD2Q9NZN4 543 aa14.98□□□□□ -0.01
CDCA3-202ENST00000422785 TBX20Q9UMR3 447 aa14.98□□□□□ -0.01
CDCA3-202ENST00000422785 KIAA1217Q5T5P2 1943 aa14.98□□□□□ -0.01
CDCA3-202ENST00000422785 CES2O00748 559 aa14.98□□□□□ -0.01
CDCA3-202ENST00000422785 STBD1O95210 358 aa14.98□□□□□ -0.01
CDCA3-202ENST00000422785 NPTX2P47972 431 aa14.98□□□□□ -0.01
CDCA3-202ENST00000422785 HIRAP54198 1017 aaPredicted RBP14.98□□□□□ -0.01
CDCA3-202ENST00000422785 DMP1Q13316 513 aaPredicted RBP14.98□□□□□ -0.01
CDCA3-202ENST00000422785 LNX1Q8TBB1 728 aaPredicted RBP14.98□□□□□ -0.01
CDCA3-202ENST00000422785 KIFAP3Q92845 792 aa14.98□□□□□ -0.01
CDCA3-202ENST00000422785 VTI1AQ96AJ9 217 aa14.98□□□□□ -0.01
CDCA3-202ENST00000422785 NTPCRQ9BSD7 190 aaKnown RBP14.98□□□□□ -0.01
CDCA3-202ENST00000422785 VIPAS39Q9H9C1 493 aa14.98□□□□□ -0.01
CDCA3-202ENST00000422785 C17orf75Q9HAS0 396 aa14.98□□□□□ -0.01
CDCA3-202ENST00000422785 PDE11AQ9HCR9 933 aa14.98□□□□□ -0.01
CDCA3-202ENST00000422785 WDR81Q562E7 1941 aa14.98□□□□□ -0.01
CDCA3-202ENST00000422785 SPDYE16A6NNV3 312 aaPredicted RBP14.97□□□□□ -0.01
CDCA3-202ENST00000422785 PMM2O15305 246 aa14.97□□□□□ -0.01
CDCA3-202ENST00000422785 ZNF862O60290 1169 aa14.97□□□□□ -0.01
CDCA3-202ENST00000422785 PSAPP07602 524 aa14.97□□□□□ -0.01
CDCA3-202ENST00000422785 NOP2P46087 812 aaKnown RBP14.97□□□□□ -0.01
CDCA3-202ENST00000422785 PPP3CAQ08209 521 aa14.97□□□□□ -0.01
CDCA3-202ENST00000422785 SH3D19Q5HYK7 790 aa14.97□□□□□ -0.01
CDCA3-202ENST00000422785 C1orf220Q5T0J3 134 aa14.97□□□□□ -0.01
CDCA3-202ENST00000422785 NLGN2Q8NFZ4 835 aa14.97□□□□□ -0.01
CDCA3-202ENST00000422785 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.97□□□□□ -0.012e-7■■■■■ 42.5
CDCA3-202ENST00000422785 SPIRE2Q8WWL2 714 aa14.97□□□□□ -0.01
CDCA3-202ENST00000422785 MS4A14Q96JA4 679 aa14.97□□□□□ -0.01
CDCA3-202ENST00000422785 JPH1Q9HDC5 661 aaPredicted RBP14.97□□□□□ -0.01
CDCA3-202ENST00000422785 CCDC169A6NNP5 214 aa14.97□□□□□ -0.01
CDCA3-202ENST00000422785 H3BQF6 201 aa14.97□□□□□ -0.01
CDCA3-202ENST00000422785 POLR3GO15318 223 aaPredicted RBP14.97□□□□□ -0.01
CDCA3-202ENST00000422785 ZMYND10O75800 440 aa14.97□□□□□ -0.01
CDCA3-202ENST00000422785 MATR3P43243 847 aaKnown RBP eCLIP14.97□□□□□ -0.01
CDCA3-202ENST00000422785 KIF22Q14807 665 aa14.97□□□□□ -0.01
CDCA3-202ENST00000422785 EPC2Q52LR7 807 aa14.97□□□□□ -0.01
CDCA3-202ENST00000422785 GLE1Q53GS7 698 aaKnown RBP14.97□□□□□ -0.01
CDCA3-202ENST00000422785 MAP4K3Q8IVH8 894 aa14.97□□□□□ -0.01
CDCA3-202ENST00000422785 TPCN2Q8NHX9 752 aa14.97□□□□□ -0.01
CDCA3-202ENST00000422785 LMBR1Q8WVP7 490 aa14.97□□□□□ -0.01
CDCA3-202ENST00000422785 CEP170P1Q96L14 293 aa14.97□□□□□ -0.01
CDCA3-202ENST00000422785 RBM12Q9NTZ6 932 aaKnown RBP14.97□□□□□ -0.01
CDCA3-202ENST00000422785 LRRIQ3A6PVS8 624 aaPredicted RBP14.96□□□□□ -0.01
CDCA3-202ENST00000422785 SPATA31C2B4DYI2 1134 aa14.96□□□□□ -0.01
CDCA3-202ENST00000422785 RPS6KA1Q15418 735 aa14.96□□□□□ -0.01
CDCA3-202ENST00000422785 GNPTABQ3T906 1256 aa14.96□□□□□ -0.01
CDCA3-202ENST00000422785 DNAAF5Q86Y56 855 aa14.96□□□□□ -0.01
CDCA3-202ENST00000422785 GLYCTKQ8IVS8 523 aa14.96□□□□□ -0.01
CDCA3-202ENST00000422785 TAF4BQ92750 862 aa14.96□□□□□ -0.01
CDCA3-202ENST00000422785 ACBD3Q9H3P7 528 aa14.96□□□□□ -0.01
CDCA3-202ENST00000422785 SLC9A2Q9UBY0 812 aa14.96□□□□□ -0.01
CDCA3-202ENST00000422785 PACSIN2Q9UNF0 486 aaPredicted RBP14.96□□□□□ -0.01
CDCA3-202ENST00000422785 USP20Q9Y2K6 914 aa14.96□□□□□ -0.01
CDCA3-202ENST00000422785 GCLMP48507 274 aa14.96□□□□□ -0.01
CDCA3-202ENST00000422785 GALCP54803 685 aa14.96□□□□□ -0.01
CDCA3-202ENST00000422785 ARHGAP44Q17R89 818 aa14.96□□□□□ -0.01
CDCA3-202ENST00000422785 SWSAP1Q6NVH7 229 aa14.96□□□□□ -0.01
CDCA3-202ENST00000422785 ZSWIM2Q8NEG5 633 aa14.96□□□□□ -0.01
CDCA3-202ENST00000422785 PLEKHO2Q8TD55 490 aa14.96□□□□□ -0.01
CDCA3-202ENST00000422785 HDAC7Q8WUI4 952 aa14.96□□□□□ -0.01
CDCA3-202ENST00000422785 ZCCHC17Q9NP64 241 aaKnown RBP14.96□□□□□ -0.01
CDCA3-202ENST00000422785 KMT5AQ9NQR1 393 aa14.96□□□□□ -0.01
CDCA3-202ENST00000422785 DMGDHQ9UI17 866 aaKnown RBP14.96□□□□□ -0.01
CDCA3-202ENST00000422785 FOXN3O00409 490 aaPredicted RBP14.96□□□□□ -0.02
CDCA3-202ENST00000422785 KIF4AO95239 1232 aa14.96□□□□□ -0.02
CDCA3-202ENST00000422785 MYBL2P10244 700 aa14.96□□□□□ -0.02
CDCA3-202ENST00000422785 ADSSP30520 456 aa14.96□□□□□ -0.02
CDCA3-202ENST00000422785 RTP1P59025 263 aa14.96□□□□□ -0.02
CDCA3-202ENST00000422785 ABHD15Q6UXT9 468 aa14.96□□□□□ -0.02
CDCA3-202ENST00000422785 SLFN11Q7Z7L1 901 aa14.96□□□□□ -0.02
CDCA3-202ENST00000422785 UBE2TQ9NPD8 197 aaPredicted RBP14.96□□□□□ -0.02
CDCA3-202ENST00000422785 PDLIM7Q9NR12 457 aa14.96□□□□□ -0.02
CDCA3-202ENST00000422785 DENND3A2RUS2 1198 aa14.95□□□□□ -0.02
CDCA3-202ENST00000422785 ANKRD63C9JTQ0 380 aa14.95□□□□□ -0.02
CDCA3-202ENST00000422785 USP2O75604 605 aaPredicted RBP14.95□□□□□ -0.02
CDCA3-202ENST00000422785 DGAT1O75907 488 aa14.95□□□□□ -0.02
CDCA3-202ENST00000422785 ADRB2P07550 413 aa14.95□□□□□ -0.02
CDCA3-202ENST00000422785 CNGA1P29973 690 aa14.95□□□□□ -0.02
CDCA3-202ENST00000422785 DNA2P51530 1060 aa14.95□□□□□ -0.02
CDCA3-202ENST00000422785 ACTR2P61160 394 aa14.95□□□□□ -0.02
CDCA3-202ENST00000422785 MCPH1Q8NEM0 835 aa14.95□□□□□ -0.02
CDCA3-202ENST00000422785 CHST13Q8NET6 341 aa14.95□□□□□ -0.02
CDCA3-202ENST00000422785 BSNDQ8WZ55 320 aa14.95□□□□□ -0.02
CDCA3-202ENST00000422785 STIM2Q9P246 746 aa14.95□□□□□ -0.02
CDCA3-202ENST00000422785 LOC285556D6RIA3 1793 aa14.95□□□□□ -0.02
CDCA3-202ENST00000422785 TMEM253P0C7T8 217 aa14.95□□□□□ -0.02
CDCA3-202ENST00000422785 SNRNP35Q16560 246 aaKnown RBP14.95□□□□□ -0.02
CDCA3-202ENST00000422785 C8orf74Q6P047 294 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms