RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 N4BP2L2Q92802 583 aaPredicted RBP11.36□□□□□ -0.59
SEMA4D-208ENST00000422704 PVALEFA0A1B0GWK0 134 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 H0YCG3 227 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 ZBTB7AO95365 584 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 SLC8A1P32418 973 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 POLE2P56282 527 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 GPC5P78333 572 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 SEPT6Q14141 434 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 GRM4Q14833 912 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 NEDD1Q8NHV4 660 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 C9orf72Q96LT7 481 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 SLC13A1Q9BZW2 595 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 CCDC68Q9H2F9 335 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 MORC2Q9Y6X9 1032 aaPredicted RBP11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 A0A1B0GTH6 734 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 CCDC78A2IDD5 438 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 TTI1O43156 1089 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 SMIM24O75264 130 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 ESRRAP11474 423 aaPredicted RBP11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 RFX5P48382 616 aaPredicted RBP11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 TAF11Q15544 211 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 TMEM259Q4ZIN3 620 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 CCDC93Q567U6 631 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 FAM160B1Q5W0V3 765 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 SNRNP48Q6IEG0 339 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 ZC3H18Q86VM9 953 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 BBOF1Q8ND07 529 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 ENGASEQ8NFI3 743 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 WRNIP1Q96S55 665 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 EIF2AK1Q9BQI3 630 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 NUP85Q9BW27 656 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 PPARGC1AQ9UBK2 798 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 PAPPAQ13219 1627 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 CARSP49589 748 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 KCTD19Q17RG1 926 aaPredicted RBP11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 HABP4Q5JVS0 413 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 SPOPLQ6IQ16 392 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 DPY19L2Q6NUT2 758 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 LCA5Q86VQ0 697 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 ADSSL1Q8N142 457 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 AFAP1L2Q8N4X5 818 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 PPM1NQ8N819 430 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 ATXN7L3BQ96GX2 97 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 BPIFA3Q9BQP9 254 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 NOC2LQ9Y3T9 749 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 COL15A1P39059 1388 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 HMGB1P1B2RPK0 211 aaPredicted RBP11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 ATMINO43313 823 aaPredicted RBP11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 ACOT2P49753 483 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 LMNB2Q03252 620 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 TRIM28Q13263 835 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 FBXW10Q5XX13 1052 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 GJB7Q6PEY0 223 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 ZNF564Q8TBZ8 553 aaPredicted RBP11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 SPIRE2Q8WWL2 714 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 CELF4Q9BZC1 486 aaKnown RBP11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 MIS12Q9H081 205 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 SMYD3Q9H7B4 428 aa11.35□□□□□ -0.59
SEMA4D-208ENST00000422704 CCDC188H7C350 402 aa11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 VAMP7P51809 220 aa11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 TMPRSS15P98073 1019 aa11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 NR1I3Q14994 352 aa11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 MIS18BP1Q6P0N0 1132 aa11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 CCDC137Q6PK04 289 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 CDR2LQ86X02 465 aaPredicted RBP11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 RHOT2Q8IXI1 618 aa11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 CEP120Q8N960 986 aa11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 RBM12Q9NTZ6 932 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 CAPN11Q9UMQ6 739 aa11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 CCDC195A0A1B0GUA6 201 aa11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 PDHA1P08559 390 aa11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 ARL4AP40617 200 aa11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 EPHB1P54762 984 aa11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 ATP6V1E2Q96A05 226 aa11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 SNX25Q9H3E2 840 aa11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 SUDS3Q9H7L9 328 aaPredicted RBP11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 RNF146Q9NTX7 359 aa11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 DPYDQ12882 1025 aa11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 GPS1Q13098 491 aa11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 COL9A3Q14050 684 aaPredicted RBP11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 GRAMD1BQ3KR37 738 aa11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 HAUS6Q7Z4H7 955 aa11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 ZNF710Q8N1W2 664 aa11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 PDZD8Q8NEN9 1154 aa11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 RNPC3Q96LT9 517 aaKnown RBP11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 CFAP57Q96MR6 1250 aa11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 MYCBPQ99417 103 aaPredicted RBP11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 PHF20Q9BVI0 1012 aa11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 SPC25Q9HBM1 224 aa11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 SNX12Q9UMY4 172 aa11.34□□□□□ -0.59
SEMA4D-208ENST00000422704 AK9Q5TCS8 1911 aa11.33□□□□□ -0.59
SEMA4D-208ENST00000422704 ANO9A1A5B4 782 aa11.33□□□□□ -0.6
SEMA4D-208ENST00000422704 ZNF667Q5HYK9 610 aa11.33□□□□□ -0.6
SEMA4D-208ENST00000422704 C6orf118Q5T5N4 469 aa11.33□□□□□ -0.6
SEMA4D-208ENST00000422704 CIAPIN1Q6FI81 312 aa11.33□□□□□ -0.6
SEMA4D-208ENST00000422704 RCSD1Q6JBY9 416 aa11.33□□□□□ -0.6
SEMA4D-208ENST00000422704 SPATS2Q86XZ4 545 aaKnown RBP11.33□□□□□ -0.6
SEMA4D-208ENST00000422704 GABPB2Q8TAK5 448 aaPredicted RBP11.33□□□□□ -0.6
SEMA4D-208ENST00000422704 FAF2Q96CS3 445 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms