RNA–Protein interactions for RNA: ENST00000421757.5

FNDC3B-204, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best) BASIC

Gene FNDC3B, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-204ENST00000421757 PCBP1Q15365 356 aaKnown RBP eCLIP23.72■■□□□ 1.391e-6■■□□□ 13.9
FNDC3B-204ENST00000421757 LONRF3Q496Y0 759 aa23.72■■□□□ 1.39
FNDC3B-204ENST00000421757 FOXD4L5Q5VV16 416 aaPredicted RBP23.72■■□□□ 1.39
FNDC3B-204ENST00000421757 KCNK18Q7Z418 384 aa23.72■■□□□ 1.39
FNDC3B-204ENST00000421757 IFNLR1Q8IU57 520 aaPredicted RBP23.72■■□□□ 1.39
FNDC3B-204ENST00000421757 ZBTB8OSQ8IWT0 167 aa23.72■■□□□ 1.39
FNDC3B-204ENST00000421757 RASSF8Q8NHQ8 419 aa23.72■■□□□ 1.39
FNDC3B-204ENST00000421757 FOXD4L4Q8WXT5 416 aaPredicted RBP23.72■■□□□ 1.39
FNDC3B-204ENST00000421757 CALML4Q96GE6 196 aa23.72■■□□□ 1.39
FNDC3B-204ENST00000421757 PNMA5Q96PV4 448 aa23.72■■□□□ 1.39
FNDC3B-204ENST00000421757 C11orf84Q9BUA3 381 aaPredicted RBP23.72■■□□□ 1.39
FNDC3B-204ENST00000421757 TRAIPQ9BWF2 469 aa23.72■■□□□ 1.39
FNDC3B-204ENST00000421757 NFKBIZQ9BYH8 718 aa23.72■■□□□ 1.39
FNDC3B-204ENST00000421757 TMEM117Q9H0C3 514 aa23.72■■□□□ 1.39
FNDC3B-204ENST00000421757 POLD4Q9HCU8 107 aa23.72■■□□□ 1.39
FNDC3B-204ENST00000421757 LMCD1Q9NZU5 365 aa23.72■■□□□ 1.39
FNDC3B-204ENST00000421757 COL4A4P53420 1690 aaPredicted RBP23.72■■□□□ 1.39
FNDC3B-204ENST00000421757 C5orf67F2Z3F1 127 aa23.71■■□□□ 1.39
FNDC3B-204ENST00000421757 LINC00271P0C7V0 271 aa23.71■■□□□ 1.39
FNDC3B-204ENST00000421757 MARCKSP29966 332 aaPredicted RBP23.71■■□□□ 1.39
FNDC3B-204ENST00000421757 RAB27AP51159 221 aa23.71■■□□□ 1.39
FNDC3B-204ENST00000421757 GRIN1Q05586 938 aa23.71■■□□□ 1.39
FNDC3B-204ENST00000421757 SKIV2LQ15477 1246 aaKnown RBP23.71■■□□□ 1.39
FNDC3B-204ENST00000421757 PTPROQ16827 1216 aa23.71■■□□□ 1.39
FNDC3B-204ENST00000421757 HYIQ5T013 277 aa23.71■■□□□ 1.39
FNDC3B-204ENST00000421757 KIFAP3Q92845 792 aa23.71■■□□□ 1.39
FNDC3B-204ENST00000421757 CPB2Q96IY4 423 aa23.71■■□□□ 1.39
FNDC3B-204ENST00000421757 IFT74Q96LB3 600 aa23.71■■□□□ 1.39
FNDC3B-204ENST00000421757 PLVAPQ9BX97 442 aa23.71■■□□□ 1.39
FNDC3B-204ENST00000421757 TSPAN1O60635 241 aa23.7■■□□□ 1.38
FNDC3B-204ENST00000421757 PDIA4P13667 645 aaKnown RBP23.7■■□□□ 1.38
FNDC3B-204ENST00000421757 ATF7P17544 494 aaPredicted RBP23.7■■□□□ 1.38
FNDC3B-204ENST00000421757 AXLP30530 894 aa23.7■■□□□ 1.38
FNDC3B-204ENST00000421757 HOXA11P31270 313 aaPredicted RBP23.7■■□□□ 1.38
FNDC3B-204ENST00000421757 PPP2R5AQ15172 486 aa23.7■■□□□ 1.38
FNDC3B-204ENST00000421757 NOTUMQ6P988 496 aa23.7■■□□□ 1.38
FNDC3B-204ENST00000421757 ZNF598Q86UK7 904 aaKnown RBP23.7■■□□□ 1.38
FNDC3B-204ENST00000421757 KCTD17Q8N5Z5 321 aa23.7■■□□□ 1.38
FNDC3B-204ENST00000421757 DEPTORQ8TB45 409 aa23.7■■□□□ 1.38
FNDC3B-204ENST00000421757 HELQQ8TDG4 1101 aa23.7■■□□□ 1.38
FNDC3B-204ENST00000421757 LPPQ93052 612 aa23.7■■□□□ 1.38
FNDC3B-204ENST00000421757 CASD1Q96PB1 797 aa23.7■■□□□ 1.38
FNDC3B-204ENST00000421757 C2orf40Q9H1Z8 148 aa23.7■■□□□ 1.38
FNDC3B-204ENST00000421757 AAASQ9NRG9 546 aa23.7■■□□□ 1.38
FNDC3B-204ENST00000421757 RNF19AQ9NV58 838 aa23.7■■□□□ 1.38
FNDC3B-204ENST00000421757 TYW1Q9NV66 732 aaKnown RBP23.7■■□□□ 1.38
FNDC3B-204ENST00000421757 PCDHB2Q9Y5E7 798 aa23.7■■□□□ 1.38
FNDC3B-204ENST00000421757 NAMPTP43490 491 aa23.69■■□□□ 1.38
FNDC3B-204ENST00000421757 PTPAQ15257 358 aa23.69■■□□□ 1.38
FNDC3B-204ENST00000421757 CLLU1OSQ5K130 101 aa23.69■■□□□ 1.38
FNDC3B-204ENST00000421757 RINT1Q6NUQ1 792 aa23.69■■□□□ 1.38
FNDC3B-204ENST00000421757 BSNDQ8WZ55 320 aa23.69■■□□□ 1.38
FNDC3B-204ENST00000421757 PGBD4Q96DM1 585 aa23.69■■□□□ 1.38
FNDC3B-204ENST00000421757 USP28Q96RU2 1077 aa23.69■■□□□ 1.38
FNDC3B-204ENST00000421757 PCDHB12Q9Y5F1 795 aa23.69■■□□□ 1.38
FNDC3B-204ENST00000421757 RALGAPA2Q2PPJ7 1873 aa23.68■■□□□ 1.38
FNDC3B-204ENST00000421757 NLRC5Q86WI3 1866 aa23.68■■□□□ 1.38
FNDC3B-204ENST00000421757 SLC26A4O43511 780 aa23.68■■□□□ 1.38
FNDC3B-204ENST00000421757 LIG1P18858 919 aa23.68■■□□□ 1.38
FNDC3B-204ENST00000421757 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.68■■□□□ 1.38
FNDC3B-204ENST00000421757 LRRC43Q8N309 656 aa23.68■■□□□ 1.38
FNDC3B-204ENST00000421757 MRPL38Q96DV4 380 aaKnown RBP23.68■■□□□ 1.38
FNDC3B-204ENST00000421757 RUSC1Q9BVN2 902 aa23.68■■□□□ 1.38
FNDC3B-204ENST00000421757 CSRNP2Q9H175 543 aa23.68■■□□□ 1.38
FNDC3B-204ENST00000421757 PRMT7Q9NVM4 692 aaPredicted RBP23.68■■□□□ 1.38
FNDC3B-204ENST00000421757 HCSTQ9UBK5 93 aa23.68■■□□□ 1.38
FNDC3B-204ENST00000421757 B4GALT5O43286 388 aa23.67■■□□□ 1.38
FNDC3B-204ENST00000421757 ZNF623O75123 536 aa23.67■■□□□ 1.38
FNDC3B-204ENST00000421757 HIP1RO75146 1068 aa23.67■■□□□ 1.38
FNDC3B-204ENST00000421757 CSPG5O95196 566 aa23.67■■□□□ 1.38
FNDC3B-204ENST00000421757 PLA2G4BP0C869 781 aa23.67■■□□□ 1.38
FNDC3B-204ENST00000421757 ARF4P18085 180 aaPredicted RBP23.67■■□□□ 1.38
FNDC3B-204ENST00000421757 AMHR2Q16671 573 aa23.67■■□□□ 1.38
FNDC3B-204ENST00000421757 TMEM132AQ24JP5 1023 aa23.67■■□□□ 1.38
FNDC3B-204ENST00000421757 TMEM119Q4V9L6 283 aa23.67■■□□□ 1.38
FNDC3B-204ENST00000421757 SPECC1Q5M775 1068 aa23.67■■□□□ 1.38
FNDC3B-204ENST00000421757 CDCA2Q69YH5 1023 aaPredicted RBP23.67■■□□□ 1.38
FNDC3B-204ENST00000421757 GLB1LQ6UWU2 654 aa23.67■■□□□ 1.38
FNDC3B-204ENST00000421757 C1orf186Q6ZWK4 172 aa23.67■■□□□ 1.38
FNDC3B-204ENST00000421757 SYT2Q8N9I0 419 aaPredicted RBP23.67■■□□□ 1.38
FNDC3B-204ENST00000421757 KLHL23Q8NBE8 558 aa23.67■■□□□ 1.38
FNDC3B-204ENST00000421757 P2RX5Q93086 422 aa23.67■■□□□ 1.38
FNDC3B-204ENST00000421757 CCDC51Q96ER9 411 aa23.67■■□□□ 1.38
FNDC3B-204ENST00000421757 DRC1Q96MC2 740 aa23.67■■□□□ 1.38
FNDC3B-204ENST00000421757 ZNF396Q96N95 335 aaPredicted RBP23.67■■□□□ 1.38
FNDC3B-204ENST00000421757 TRIM6Q9C030 488 aaPredicted RBP23.67■■□□□ 1.38
FNDC3B-204ENST00000421757 ALG13Q9NP73 1137 aaKnown RBP23.67■■□□□ 1.38
FNDC3B-204ENST00000421757 INPP5FQ9Y2H2 1132 aa23.67■■□□□ 1.38
FNDC3B-204ENST00000421757 SRPRBQ9Y5M8 271 aaKnown RBP23.67■■□□□ 1.38
FNDC3B-204ENST00000421757 FNDC1Q4ZHG4 1894 aaPredicted RBP23.66■■□□□ 1.38
FNDC3B-204ENST00000421757 CCDC169A6NNP5 214 aa23.66■■□□□ 1.38
FNDC3B-204ENST00000421757 GRM6O15303 877 aa23.66■■□□□ 1.38
FNDC3B-204ENST00000421757 ZSCAN22P10073 491 aaPredicted RBP23.66■■□□□ 1.38
FNDC3B-204ENST00000421757 RAD51AP2Q09MP3 1159 aa23.66■■□□□ 1.38
FNDC3B-204ENST00000421757 KARSQ15046 597 aaKnown RBP23.66■■□□□ 1.38
FNDC3B-204ENST00000421757 MAPK6Q16659 721 aa23.66■■□□□ 1.38
FNDC3B-204ENST00000421757 NAALADL2Q58DX5 795 aa23.66■■□□□ 1.38
FNDC3B-204ENST00000421757 UBXN11Q5T124 520 aa23.66■■□□□ 1.38
FNDC3B-204ENST00000421757 KIFC3Q9BVG8 833 aa23.66■■□□□ 1.38
FNDC3B-204ENST00000421757 MRPL9Q9BYD2 267 aaKnown RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms