RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 CTAGE3PQ8IX95 158 aa11.53□□□□□ -0.56
PTCH1-206ENST00000421141 MICALL1Q8N3F8 863 aa11.53□□□□□ -0.56
PTCH1-206ENST00000421141 RIT2Q99578 217 aa11.53□□□□□ -0.56
PTCH1-206ENST00000421141 VPS37BQ9H9H4 285 aa11.53□□□□□ -0.56
PTCH1-206ENST00000421141 EPB41L4AQ9HCS5 686 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-206ENST00000421141 GJB4Q9NTQ9 266 aa11.53□□□□□ -0.56
PTCH1-206ENST00000421141 PRMT7Q9NVM4 692 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-206ENST00000421141 RGL1Q9NZL6 768 aa11.53□□□□□ -0.56
PTCH1-206ENST00000421141 MAGED2Q9UNF1 606 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-206ENST00000421141 HYOU1Q9Y4L1 999 aa11.53□□□□□ -0.56
PTCH1-206ENST00000421141 IGSF9BQ9UPX0 1349 aa11.53□□□□□ -0.56
PTCH1-206ENST00000421141 PVALEFA0A1B0GWK0 134 aa11.53□□□□□ -0.56
PTCH1-206ENST00000421141 ERICH4A6NGS2 130 aa11.53□□□□□ -0.56
PTCH1-206ENST00000421141 CA4P22748 312 aa11.53□□□□□ -0.56
PTCH1-206ENST00000421141 GARSP41250 739 aaKnown RBP11.53□□□□□ -0.56
PTCH1-206ENST00000421141 MOCS3O95396 460 aa11.53□□□□□ -0.56
PTCH1-206ENST00000421141 PGK2P07205 417 aa11.53□□□□□ -0.56
PTCH1-206ENST00000421141 KRT15P19012 456 aa11.53□□□□□ -0.56
PTCH1-206ENST00000421141 INPP5BP32019 993 aa11.53□□□□□ -0.56
PTCH1-206ENST00000421141 ALDH1A3P47895 512 aa11.53□□□□□ -0.56
PTCH1-206ENST00000421141 HAUS6Q7Z4H7 955 aa11.53□□□□□ -0.56
PTCH1-206ENST00000421141 KCNH7Q9NS40 1196 aa11.53□□□□□ -0.56
PTCH1-206ENST00000421141 STKLD1Q8NE28 680 aa11.52□□□□□ -0.56
PTCH1-206ENST00000421141 NR2E3Q9Y5X4 410 aa11.52□□□□□ -0.56
PTCH1-206ENST00000421141 PASKQ96RG2 1323 aa11.52□□□□□ -0.56
PTCH1-206ENST00000421141 DPCR1Q3MIW9 517 aa11.52□□□□□ -0.56
PTCH1-206ENST00000421141 ARHGEF18Q6ZSZ5 1173 aa11.52□□□□□ -0.56
PTCH1-206ENST00000421141 DNAAF3Q8N9W5 541 aa11.52□□□□□ -0.56
PTCH1-206ENST00000421141 CCHCR1Q8TD31 782 aa11.52□□□□□ -0.56
PTCH1-206ENST00000421141 TRIM56Q9BRZ2 755 aaKnown RBP11.52□□□□□ -0.56
PTCH1-206ENST00000421141 ENTPD7Q9NQZ7 604 aa11.52□□□□□ -0.56
PTCH1-206ENST00000421141 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.52□□□□□ -0.56
PTCH1-206ENST00000421141 UBE4BO95155 1302 aa11.52□□□□□ -0.57
PTCH1-206ENST00000421141 TRPA1O75762 1119 aa11.52□□□□□ -0.57
PTCH1-206ENST00000421141 OR1G1P47890 313 aa11.52□□□□□ -0.57
PTCH1-206ENST00000421141 EVCP57679 992 aa11.52□□□□□ -0.57
PTCH1-206ENST00000421141 TRPC7Q9HCX4 862 aa11.52□□□□□ -0.57
PTCH1-206ENST00000421141 A8MXQ7 604 aa11.52□□□□□ -0.57
PTCH1-206ENST00000421141 NEMP1O14524 444 aa11.52□□□□□ -0.57
PTCH1-206ENST00000421141 KRT1P04264 644 aa11.52□□□□□ -0.57
PTCH1-206ENST00000421141 GCLMP48507 274 aa11.52□□□□□ -0.57
PTCH1-206ENST00000421141 TMEM35BQ8NCS4 154 aa11.52□□□□□ -0.57
PTCH1-206ENST00000421141 STAP1Q9ULZ2 295 aa11.52□□□□□ -0.57
PTCH1-206ENST00000421141 ATP11BQ9Y2G3 1177 aa11.52□□□□□ -0.57
PTCH1-206ENST00000421141 VIRMAQ69YN4 1812 aaKnown RBP11.52□□□□□ -0.57
PTCH1-206ENST00000421141 BNIP3LO60238 219 aa11.52□□□□□ -0.57
PTCH1-206ENST00000421141 RAG1P15918 1043 aa11.52□□□□□ -0.57
PTCH1-206ENST00000421141 ZNF394Q53GI3 561 aa11.52□□□□□ -0.57
PTCH1-206ENST00000421141 CPLX4Q7Z7G2 160 aa11.52□□□□□ -0.57
PTCH1-206ENST00000421141 FBF1Q8TES7 1133 aa11.52□□□□□ -0.57
PTCH1-206ENST00000421141 SAAL1Q96ER3 474 aa11.52□□□□□ -0.57
PTCH1-206ENST00000421141 KIAA1683Q9H0B3 1180 aa11.52□□□□□ -0.57
PTCH1-206ENST00000421141 FBXO28Q9NVF7 368 aa11.52□□□□□ -0.57
PTCH1-206ENST00000421141 TGFB3P10600 412 aa11.52□□□□□ -0.57
PTCH1-206ENST00000421141 DCAF4L1Q3SXM0 396 aa11.52□□□□□ -0.57
PTCH1-206ENST00000421141 MTG1Q9BT17 334 aaPredicted RBP11.52□□□□□ -0.57
PTCH1-206ENST00000421141 SLC4A1P02730 911 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 SNX17Q15036 470 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 ACER1Q8TDN7 264 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 SH3TC2Q8TF17 1288 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 ATRIPQ8WXE1 791 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 TMEM169Q96HH4 297 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 HAUS4Q9H6D7 363 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 DYRK4Q9NR20 520 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 MAD1L1Q9Y6D9 718 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 MYPNQ86TC9 1320 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 MAP3K7O43318 606 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 CYBBP04839 570 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 PLS3P13797 630 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 FGFR2P21802 821 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 GNA15P30679 374 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 SLC26A2P50443 739 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 OAZ1P54368 228 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 RBP5P82980 135 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 SV2CQ496J9 727 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 ZNF484Q5JVG2 852 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 FBXO16Q8IX29 292 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-206ENST00000421141 TOPAZ1Q8N9V7 1692 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 ERVK-9P63128 1117 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 ERVK-24P63145 666 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 CCDC170Q8IYT3 715 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 PPP4R1Q8TF05 950 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 HSPH1Q92598 858 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 ASCC2Q9H1I8 757 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-206ENST00000421141 TJP2Q9UDY2 1190 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 UBR2Q8IWV8 1755 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 APOEP02649 317 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 SETDB1Q15047 1291 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 TRIM72Q6ZMU5 477 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 GPT2Q8TD30 523 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 PHF20Q9BVI0 1012 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 ASNSD1Q9NWL6 643 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 TCP1P17987 556 aaKnown RBP11.51□□□□□ -0.57
PTCH1-206ENST00000421141 COG7P83436 770 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 VGLL4Q14135 290 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 SGO2Q562F6 1265 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 KIAA1755Q5JYT7 1200 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 KRT39Q6A163 491 aa11.51□□□□□ -0.57
PTCH1-206ENST00000421141 DARS2Q6PI48 645 aaKnown RBP11.51□□□□□ -0.57
PTCH1-206ENST00000421141 SHCBP1Q8NEM2 672 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms