RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 E9PMD0 336 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 GGPS1O95749 300 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 SEC24CP53992 1094 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 TFDP2Q14188 446 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 STAT4Q14765 748 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 PFKFB3Q16875 520 aaPredicted RBP13.13□□□□□ -0.31
CLCN4-203ENST00000421085 LONRF1Q17RB8 773 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 KIF17Q9P2E2 1029 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 KLHL8Q9P2G9 620 aaPredicted RBP13.13□□□□□ -0.31
CLCN4-203ENST00000421085 F5H423 210 aaPredicted RBP13.13□□□□□ -0.31
CLCN4-203ENST00000421085 BMP3P12645 472 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 CDC27P30260 824 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 NBPF20Q3BBV1 942 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 METTL16Q86W50 562 aaKnown RBP13.13□□□□□ -0.31
CLCN4-203ENST00000421085 STRBPQ96SI9 672 aaKnown RBP13.13□□□□□ -0.31
CLCN4-203ENST00000421085 KIF2CQ99661 725 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 RPAP1Q9BWH6 1393 aaPredicted RBP13.13□□□□□ -0.31
CLCN4-203ENST00000421085 GOLGA8RI6L899 631 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 GLYCTKQ8IVS8 523 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 PITPNM2Q9BZ72 1349 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 APOA1P02647 267 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 KANSL2Q9H9L4 492 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 KIAA0556O60303 1618 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 TNFAIP1Q13829 316 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 SMAD1Q15797 465 aaKnown RBP13.13□□□□□ -0.31
CLCN4-203ENST00000421085 TXNRD1Q16881 649 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 NOP9Q86U38 636 aaKnown RBP13.13□□□□□ -0.31
CLCN4-203ENST00000421085 RFFLQ8WZ73 363 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 TRIM51Q9BSJ1 452 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 INTS2Q9H0H0 1204 aaKnown RBP13.13□□□□□ -0.31
CLCN4-203ENST00000421085 CYP26B1Q9NR63 512 aa13.13□□□□□ -0.31
CLCN4-203ENST00000421085 AATKQ6ZMQ8 1374 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 SERPINB2P05120 415 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 CYP2E1P05181 493 aaPredicted RBP13.12□□□□□ -0.31
CLCN4-203ENST00000421085 UBTFL6P0CB48 400 aaPredicted RBP13.12□□□□□ -0.31
CLCN4-203ENST00000421085 SERPINB4P48594 390 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 SNAP25P60880 206 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 KNOP1Q1ED39 458 aaKnown RBP13.12□□□□□ -0.31
CLCN4-203ENST00000421085 KIAA1755Q5JYT7 1200 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 NAF1Q96HR8 494 aaKnown RBP13.12□□□□□ -0.31
CLCN4-203ENST00000421085 ZIM3Q96PE6 472 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 ADAM33Q9BZ11 813 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 FAM8A1Q9UBU6 413 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 SLC12A6Q9UHW9 1150 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 SATB2Q9UPW6 733 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 A0A1B0GTH6 734 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 PP2D1A8MPX8 630 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 ANP32DO95626 131 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 MAP4P27816 1152 aaKnown RBP13.12□□□□□ -0.31
CLCN4-203ENST00000421085 SMARCA1P28370 1054 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 SERPINB3P29508 390 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 PAPOLAP51003 745 aaKnown RBP13.12□□□□□ -0.31
CLCN4-203ENST00000421085 POU5F1BQ06416 359 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 ANKMY2Q8IV38 441 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 SPDYE1Q8NFV5 336 aaPredicted RBP13.12□□□□□ -0.31
CLCN4-203ENST00000421085 PIK3R5Q8WYR1 880 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 ALKBH8Q96BT7 664 aaKnown RBP13.12□□□□□ -0.31
CLCN4-203ENST00000421085 ERP27Q96DN0 273 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 DLGAP2Q9P1A6 1054 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 CCND2P30279 289 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 RASGRF1Q13972 1273 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 CCDC85BQ15834 202 aaPredicted RBP13.12□□□□□ -0.31
CLCN4-203ENST00000421085 TMEM270Q6UE05 265 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 SERPINB13Q9UIV8 391 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 ARHGAP26Q9UNA1 814 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 AURKCQ9UQB9 309 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 BRD2P25440 801 aaKnown RBP13.12□□□□□ -0.31
CLCN4-203ENST00000421085 ARL13BQ3SXY8 428 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 TMEM35BQ8NCS4 154 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 SCG3Q8WXD2 468 aaKnown RBP13.12□□□□□ -0.31
CLCN4-203ENST00000421085 KIF9Q9HAQ2 790 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 ASNSD1Q9NWL6 643 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 UBN2Q6ZU65 1347 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 IL10P22301 178 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 MCAMP43121 646 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 SURF1Q15526 300 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 AGBL2Q5U5Z8 902 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 RWDD4Q6NW29 188 aaKnown RBP13.12□□□□□ -0.31
CLCN4-203ENST00000421085 ZNF710Q8N1W2 664 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 COG4Q9H9E3 785 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 SLC13A4Q9UKG4 626 aa13.12□□□□□ -0.31
CLCN4-203ENST00000421085 CCT8L1PA6NM43 557 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 FCER1AP12319 257 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 ARSEP51690 589 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 FMR1Q06787 632 aaKnown RBP eCLIP13.11□□□□□ -0.31
CLCN4-203ENST00000421085 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.11□□□□□ -0.31
CLCN4-203ENST00000421085 LY9Q9HBG7 655 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 RBM12Q9NTZ6 932 aaKnown RBP13.11□□□□□ -0.31
CLCN4-203ENST00000421085 TBC1D23Q9NUY8 699 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 SMARCAL1Q9NZC9 954 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 PCSK1NQ9UHG2 260 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 TSC22D4Q9Y3Q8 395 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 RAP1GDS1P52306 607 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 MECOMQ03112 1051 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 GADL1Q6ZQY3 521 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 ADNPQ9H2P0 1102 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 RPF1Q9H9Y2 349 aaKnown RBP13.11□□□□□ -0.31
CLCN4-203ENST00000421085 ERVK-7P63135 1459 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 K7ERI5 159 aa13.11□□□□□ -0.31
CLCN4-203ENST00000421085 IGF2BP3O00425 579 aaKnown RBP eCLIP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms