RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 HTTP42858 3142 aa13.75□□□□□ -0.21
TMEM53-206ENST00000420706 KIAA0100Q14667 2235 aaKnown RBP13.75□□□□□ -0.21
TMEM53-206ENST00000420706 DENND3A2RUS2 1198 aa13.75□□□□□ -0.21
TMEM53-206ENST00000420706 EIF3DO15371 548 aaKnown RBP eCLIP13.75□□□□□ -0.21
TMEM53-206ENST00000420706 TLR3O15455 904 aaKnown RBP13.75□□□□□ -0.21
TMEM53-206ENST00000420706 HOXD13P35453 343 aa13.75□□□□□ -0.21
TMEM53-206ENST00000420706 MRPS6P82932 125 aaKnown RBP13.75□□□□□ -0.21
TMEM53-206ENST00000420706 TLE2Q04725 743 aa13.75□□□□□ -0.21
TMEM53-206ENST00000420706 MGAT3Q09327 533 aa13.75□□□□□ -0.21
TMEM53-206ENST00000420706 ALCAMQ13740 583 aa13.75□□□□□ -0.21
TMEM53-206ENST00000420706 BMT2Q1RMZ1 405 aa13.75□□□□□ -0.21
TMEM53-206ENST00000420706 KIZQ2M2Z5 673 aa13.75□□□□□ -0.21
TMEM53-206ENST00000420706 TRIM60Q495X7 471 aa13.75□□□□□ -0.21
TMEM53-206ENST00000420706 STXBP4Q6ZWJ1 553 aa13.75□□□□□ -0.21
TMEM53-206ENST00000420706 TAS1R3Q7RTX0 852 aa13.75□□□□□ -0.21
TMEM53-206ENST00000420706 ZBTB8OSQ8IWT0 167 aa13.75□□□□□ -0.21
TMEM53-206ENST00000420706 MYOCDQ8IZQ8 938 aa13.75□□□□□ -0.21
TMEM53-206ENST00000420706 NLRP7Q8WX94 980 aa13.75□□□□□ -0.21
TMEM53-206ENST00000420706 CELF4Q9BZC1 486 aaKnown RBP13.75□□□□□ -0.21
TMEM53-206ENST00000420706 C2orf40Q9H1Z8 148 aa13.75□□□□□ -0.21
TMEM53-206ENST00000420706 TBX20Q9UMR3 447 aa13.75□□□□□ -0.21
TMEM53-206ENST00000420706 TRPV2Q9Y5S1 764 aa13.75□□□□□ -0.21
TMEM53-206ENST00000420706 CDY2AQ9Y6F7 541 aa13.75□□□□□ -0.21
TMEM53-206ENST00000420706 DCDC2CA8MYV0 355 aa13.74□□□□□ -0.21
TMEM53-206ENST00000420706 K7ERI5 159 aa13.74□□□□□ -0.21
TMEM53-206ENST00000420706 PQBP1O60828 265 aaKnown RBP13.74□□□□□ -0.21
TMEM53-206ENST00000420706 CAND2O75155 1236 aa13.74□□□□□ -0.21
TMEM53-206ENST00000420706 KIF20AO95235 890 aa13.74□□□□□ -0.21
TMEM53-206ENST00000420706 CHRNA1P02708 482 aa13.74□□□□□ -0.21
TMEM53-206ENST00000420706 SCP2P22307 547 aa13.74□□□□□ -0.21
TMEM53-206ENST00000420706 THPOP40225 353 aa13.74□□□□□ -0.21
TMEM53-206ENST00000420706 PPP1R2P41236 205 aa13.74□□□□□ -0.21
TMEM53-206ENST00000420706 PHKA2P46019 1235 aa13.74□□□□□ -0.21
TMEM53-206ENST00000420706 CRYBB1P53674 252 aaPredicted RBP13.74□□□□□ -0.21
TMEM53-206ENST00000420706 KCNA1Q09470 495 aa13.74□□□□□ -0.21
TMEM53-206ENST00000420706 FAAP100Q0VG06 881 aa13.74□□□□□ -0.21
TMEM53-206ENST00000420706 LRRC26Q2I0M4 334 aa13.74□□□□□ -0.21
TMEM53-206ENST00000420706 ANO6Q4KMQ2 910 aa13.74□□□□□ -0.21
TMEM53-206ENST00000420706 CT47A1Q5JQC4 288 aaPredicted RBP13.74□□□□□ -0.21
TMEM53-206ENST00000420706 FAM26DQ5JW98 314 aa13.74□□□□□ -0.21
TMEM53-206ENST00000420706 L1TD1Q5T7N2 865 aaKnown RBP13.74□□□□□ -0.21
TMEM53-206ENST00000420706 C11orf57Q6ZUT1 292 aaPredicted RBP13.74□□□□□ -0.21
TMEM53-206ENST00000420706 SRGAP1Q7Z6B7 1085 aa13.74□□□□□ -0.21
TMEM53-206ENST00000420706 HVCN1Q96D96 273 aa13.74□□□□□ -0.21
TMEM53-206ENST00000420706 DHTKD1Q96HY7 919 aaPredicted RBP13.74□□□□□ -0.21
TMEM53-206ENST00000420706 OSMRQ99650 979 aa13.74□□□□□ -0.21
TMEM53-206ENST00000420706 GCOM2Q9BZD3 368 aaPredicted RBP13.74□□□□□ -0.21
TMEM53-206ENST00000420706 CCDC113Q9H0I3 377 aa13.74□□□□□ -0.21
TMEM53-206ENST00000420706 DNAJC25Q9H1X3 360 aa13.74□□□□□ -0.21
TMEM53-206ENST00000420706 FZD8Q9H461 694 aa13.74□□□□□ -0.21
TMEM53-206ENST00000420706 MINDY3Q9H8M7 445 aa13.74□□□□□ -0.21
TMEM53-206ENST00000420706 UBE4BO95155 1302 aa13.73□□□□□ -0.21
TMEM53-206ENST00000420706 M0QZ92 97 aa13.73□□□□□ -0.21
TMEM53-206ENST00000420706 IQCF3P0C7M6 154 aa13.73□□□□□ -0.21
TMEM53-206ENST00000420706 CKBP12277 381 aa13.73□□□□□ -0.21
TMEM53-206ENST00000420706 DARSP14868 501 aaKnown RBP13.73□□□□□ -0.21
TMEM53-206ENST00000420706 ABCD1P33897 745 aa13.73□□□□□ -0.21
TMEM53-206ENST00000420706 EFNA5P52803 228 aa13.73□□□□□ -0.21
TMEM53-206ENST00000420706 MBTD1Q05BQ5 628 aa13.73□□□□□ -0.21
TMEM53-206ENST00000420706 RBL2Q08999 1139 aa13.73□□□□□ -0.21
TMEM53-206ENST00000420706 STIM1Q13586 685 aa13.73□□□□□ -0.21
TMEM53-206ENST00000420706 KNOP1Q1ED39 458 aaKnown RBP13.73□□□□□ -0.21
TMEM53-206ENST00000420706 ZNF618Q5T7W0 954 aa13.73□□□□□ -0.21
TMEM53-206ENST00000420706 KLHL10Q6JEL2 608 aa13.73□□□□□ -0.21
TMEM53-206ENST00000420706 NELFCDQ8IXH7 590 aa13.73□□□□□ -0.21
TMEM53-206ENST00000420706 CAGE1Q8TC20 777 aa13.73□□□□□ -0.21
TMEM53-206ENST00000420706 SCLT1Q96NL6 688 aa13.73□□□□□ -0.21
TMEM53-206ENST00000420706 ACCSQ96QU6 501 aa13.73□□□□□ -0.21
TMEM53-206ENST00000420706 INO80BQ9C086 356 aaPredicted RBP13.73□□□□□ -0.21
TMEM53-206ENST00000420706 KCTD10Q9H3F6 313 aa13.73□□□□□ -0.21
TMEM53-206ENST00000420706 SEMA6BQ9H3T3 888 aa13.73□□□□□ -0.21
TMEM53-206ENST00000420706 TSPY26PQ9H489 355 aa13.73□□□□□ -0.21
TMEM53-206ENST00000420706 TMEM206Q9H813 350 aa13.73□□□□□ -0.21
TMEM53-206ENST00000420706 DACH1Q9UI36 760 aa13.73□□□□□ -0.21
TMEM53-206ENST00000420706 GINS2Q9Y248 185 aa13.73□□□□□ -0.21
TMEM53-206ENST00000420706 ATP11BQ9Y2G3 1177 aa13.73□□□□□ -0.21
TMEM53-206ENST00000420706 PHLPP2Q6ZVD8 1323 aa13.72□□□□□ -0.21
TMEM53-206ENST00000420706 INO80B-WBP1J3KQ70 363 aa13.72□□□□□ -0.21
TMEM53-206ENST00000420706 TGFB1I1O43294 461 aa13.72□□□□□ -0.21
TMEM53-206ENST00000420706 CSDE1O75534 798 aaKnown RBP13.72□□□□□ -0.21
TMEM53-206ENST00000420706 EDN1P05305 212 aa13.72□□□□□ -0.21
TMEM53-206ENST00000420706 PRKCBP05771 671 aa13.72□□□□□ -0.21
TMEM53-206ENST00000420706 CTSHP09668 335 aa13.72□□□□□ -0.21
TMEM53-206ENST00000420706 EIF4BP23588 611 aaKnown RBP13.72□□□□□ -0.21
TMEM53-206ENST00000420706 CCNE1P24864 410 aa13.72□□□□□ -0.21
TMEM53-206ENST00000420706 ERCC5P28715 1186 aaPredicted RBP13.72□□□□□ -0.21
TMEM53-206ENST00000420706 BFSP2Q13515 415 aa13.72□□□□□ -0.21
TMEM53-206ENST00000420706 MAPK6Q16659 721 aa13.72□□□□□ -0.21
TMEM53-206ENST00000420706 FAM187BQ17R55 369 aa13.72□□□□□ -0.21
TMEM53-206ENST00000420706 CENPPQ6IPU0 288 aa13.72□□□□□ -0.21
TMEM53-206ENST00000420706 TRAF7Q6Q0C0 670 aa13.72□□□□□ -0.21
TMEM53-206ENST00000420706 MAP4K3Q8IVH8 894 aa13.72□□□□□ -0.21
TMEM53-206ENST00000420706 TMEM40Q8WWA1 233 aa13.72□□□□□ -0.21
TMEM53-206ENST00000420706 NELFBQ8WX92 580 aa13.72□□□□□ -0.21
TMEM53-206ENST00000420706 P2RX5Q93086 422 aa13.72□□□□□ -0.21
TMEM53-206ENST00000420706 MED15Q96RN5 788 aa13.72□□□□□ -0.21
TMEM53-206ENST00000420706 PRMT7Q9NVM4 692 aaPredicted RBP13.72□□□□□ -0.21
TMEM53-206ENST00000420706 EXOC7Q9UPT5 735 aa13.72□□□□□ -0.21
TMEM53-206ENST00000420706 ACKR2O00590 384 aa13.71□□□□□ -0.21
TMEM53-206ENST00000420706 PDXKO00764 312 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms