RNA–Protein interactions for RNA: ENST00000419582.5

PTPA-213, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-213ENST00000419582 PPM1JQ5JR12 505 aa17.12■□□□□ 0.33
PTPA-213ENST00000419582 MAMSTRQ6ZN01 415 aa17.12■□□□□ 0.33
PTPA-213ENST00000419582 CTCFLQ8NI51 663 aaPredicted RBP17.12■□□□□ 0.33
PTPA-213ENST00000419582 RPS6KC1Q96S38 1066 aa17.12■□□□□ 0.33
PTPA-213ENST00000419582 PPP1R16BQ96T49 567 aa17.12■□□□□ 0.33
PTPA-213ENST00000419582 NELL2Q99435 816 aa17.12■□□□□ 0.33
PTPA-213ENST00000419582 PLEKHA4Q9H4M7 779 aa17.12■□□□□ 0.33
PTPA-213ENST00000419582 LY9Q9HBG7 655 aa17.12■□□□□ 0.33
PTPA-213ENST00000419582 RXFP1Q9HBX9 757 aa17.12■□□□□ 0.33
PTPA-213ENST00000419582 PARD6AQ9NPB6 346 aa17.12■□□□□ 0.33
PTPA-213ENST00000419582 DIAPH3Q9NSV4 1193 aa17.12■□□□□ 0.33
PTPA-213ENST00000419582 SPATA6Q9NWH7 488 aaPredicted RBP17.12■□□□□ 0.33
PTPA-213ENST00000419582 SPEGQ15772 3267 aa17.11■□□□□ 0.33
PTPA-213ENST00000419582 INPPL1O15357 1258 aa17.11■□□□□ 0.33
PTPA-213ENST00000419582 LRRN2O75325 713 aa17.11■□□□□ 0.33
PTPA-213ENST00000419582 OFD1O75665 1012 aa17.11■□□□□ 0.33
PTPA-213ENST00000419582 EFEMP2O95967 443 aa17.11■□□□□ 0.33
PTPA-213ENST00000419582 ALDH2P05091 517 aa17.11■□□□□ 0.33
PTPA-213ENST00000419582 ADH1AP07327 375 aa17.11■□□□□ 0.33
PTPA-213ENST00000419582 RPS9P46781 194 aaKnown RBP17.11■□□□□ 0.33
PTPA-213ENST00000419582 GPC3P51654 580 aa17.11■□□□□ 0.33
PTPA-213ENST00000419582 SHC2P98077 582 aa17.11■□□□□ 0.33
PTPA-213ENST00000419582 COL9A2Q14055 689 aaPredicted RBP17.11■□□□□ 0.33
PTPA-213ENST00000419582 EFCAB12Q6NXP0 572 aa17.11■□□□□ 0.33
PTPA-213ENST00000419582 GPR65Q8IYL9 337 aa17.11■□□□□ 0.33
PTPA-213ENST00000419582 SRBD1Q8N5C6 995 aaKnown RBP17.11■□□□□ 0.33
PTPA-213ENST00000419582 DDX1Q92499 740 aaKnown RBP17.11■□□□□ 0.33
PTPA-213ENST00000419582 TMEM175Q9BSA9 504 aa17.11■□□□□ 0.33
PTPA-213ENST00000419582 MTA3Q9BTC8 594 aa17.11■□□□□ 0.33
PTPA-213ENST00000419582 ZDHHC7Q9NXF8 308 aa17.11■□□□□ 0.33
PTPA-213ENST00000419582 USP18Q9UMW8 372 aa17.11■□□□□ 0.33
PTPA-213ENST00000419582 AKT3Q9Y243 479 aa17.11■□□□□ 0.33
PTPA-213ENST00000419582 SOD2P04179 222 aa17.1■□□□□ 0.33
PTPA-213ENST00000419582 CLCN3P51790 818 aa17.1■□□□□ 0.33
PTPA-213ENST00000419582 GPC5P78333 572 aa17.1■□□□□ 0.33
PTPA-213ENST00000419582 SMG7Q92540 1137 aaKnown RBP17.1■□□□□ 0.33
PTPA-213ENST00000419582 NT5C3AQ9H0P0 336 aa17.1■□□□□ 0.33
PTPA-213ENST00000419582 DNAJB4Q9UDY4 337 aa17.1■□□□□ 0.33
PTPA-213ENST00000419582 NUMBLQ9Y6R0 609 aa17.1■□□□□ 0.33
PTPA-213ENST00000419582 U3KPZ7 1027 aaPredicted RBP17.1■□□□□ 0.33
PTPA-213ENST00000419582 FOXD2O60548 495 aaPredicted RBP17.09■□□□□ 0.33
PTPA-213ENST00000419582 GLUD1P00367 558 aa17.09■□□□□ 0.33
PTPA-213ENST00000419582 RNASELQ05823 741 aaKnown RBP17.09■□□□□ 0.33
PTPA-213ENST00000419582 HDAC1Q13547 482 aaPredicted RBP17.09■□□□□ 0.33
PTPA-213ENST00000419582 SLC44A4Q53GD3 710 aa17.09■□□□□ 0.33
PTPA-213ENST00000419582 ZNF746Q6NUN9 644 aaPredicted RBP17.09■□□□□ 0.33
PTPA-213ENST00000419582 RNF168Q8IYW5 571 aaPredicted RBP17.09■□□□□ 0.33
PTPA-213ENST00000419582 FAM167AQ96KS9 214 aa17.09■□□□□ 0.33
PTPA-213ENST00000419582 PRMT8Q9NR22 394 aaPredicted RBP17.09■□□□□ 0.33
PTPA-213ENST00000419582 TBC1D22BQ9NU19 505 aa17.09■□□□□ 0.33
PTPA-213ENST00000419582 KANSL3Q9P2N6 904 aa17.09■□□□□ 0.33
PTPA-213ENST00000419582 GMEB2Q9UKD1 530 aa17.09■□□□□ 0.33
PTPA-213ENST00000419582 ANGPTL2Q9UKU9 493 aa17.09■□□□□ 0.33
PTPA-213ENST00000419582 FAM170BA6NMN3 283 aa17.08■□□□□ 0.32
PTPA-213ENST00000419582 TEX28O15482 410 aa17.08■□□□□ 0.32
PTPA-213ENST00000419582 CYP21A2P08686 494 aa17.08■□□□□ 0.32
PTPA-213ENST00000419582 SREBF1P36956 1147 aa17.08■□□□□ 0.32
PTPA-213ENST00000419582 RAB27AP51159 221 aa17.08■□□□□ 0.32
PTPA-213ENST00000419582 PFKPQ01813 784 aa17.08■□□□□ 0.32
PTPA-213ENST00000419582 MLF2Q15773 248 aaPredicted RBP17.08■□□□□ 0.32
PTPA-213ENST00000419582 ZBTB41Q5SVQ8 909 aa17.08■□□□□ 0.32
PTPA-213ENST00000419582 ZNF280BQ86YH2 543 aa17.08■□□□□ 0.32
PTPA-213ENST00000419582 CKAP2LQ8IYA6 745 aa17.08■□□□□ 0.32
PTPA-213ENST00000419582 SMAP1Q8IYB5 467 aaPredicted RBP17.08■□□□□ 0.32
PTPA-213ENST00000419582 ZNF654Q8IZM8 581 aa17.08■□□□□ 0.32
PTPA-213ENST00000419582 TMTC2Q8N394 836 aa17.08■□□□□ 0.32
PTPA-213ENST00000419582 CELF5Q8N6W0 485 aaKnown RBP17.08■□□□□ 0.32
PTPA-213ENST00000419582 NCOA7Q8NI08 942 aa17.08■□□□□ 0.32
PTPA-213ENST00000419582 PRKD2Q9BZL6 878 aa17.08■□□□□ 0.32
PTPA-213ENST00000419582 MTF2Q9Y483 593 aaPredicted RBP17.08■□□□□ 0.32
PTPA-213ENST00000419582 NCAM2O15394 837 aa17.07■□□□□ 0.32
PTPA-213ENST00000419582 RFPL2O75678 378 aa17.07■□□□□ 0.32
PTPA-213ENST00000419582 RETP07949 1114 aa17.07■□□□□ 0.32
PTPA-213ENST00000419582 PMLP29590 882 aa17.07■□□□□ 0.32
PTPA-213ENST00000419582 NRLP54845 237 aa17.07■□□□□ 0.32
PTPA-213ENST00000419582 DMWDQ09019 674 aa17.07■□□□□ 0.32
PTPA-213ENST00000419582 SNW1Q13573 536 aaKnown RBP17.07■□□□□ 0.32
PTPA-213ENST00000419582 ACAP1Q15027 740 aa17.07■□□□□ 0.32
PTPA-213ENST00000419582 LAIR1Q6GTX8 287 aa17.07■□□□□ 0.32
PTPA-213ENST00000419582 LILRA6Q6PI73 481 aa17.07■□□□□ 0.32
PTPA-213ENST00000419582 RALYLQ86SE5 291 aaKnown RBP17.07■□□□□ 0.32
PTPA-213ENST00000419582 PGBD4Q96DM1 585 aa17.07■□□□□ 0.32
PTPA-213ENST00000419582 HERC2P3Q9BVR0 1158 aa17.07■□□□□ 0.32
PTPA-213ENST00000419582 GCOM2Q9BZD3 368 aaPredicted RBP17.07■□□□□ 0.32
PTPA-213ENST00000419582 LTB4R2Q9NPC1 389 aa17.07■□□□□ 0.32
PTPA-213ENST00000419582 RIC8AQ9NPQ8 531 aa17.07■□□□□ 0.32
PTPA-213ENST00000419582 FAM105AQ9NUU6 356 aa17.07■□□□□ 0.32
PTPA-213ENST00000419582 FAN1Q9Y2M0 1017 aa17.07■□□□□ 0.32
PTPA-213ENST00000419582 PCDHA10Q9Y5I2 948 aa17.07■□□□□ 0.32
PTPA-213ENST00000419582 PATJQ8NI35 1801 aa17.06■□□□□ 0.32
PTPA-213ENST00000419582 IPO5O00410 1097 aaKnown RBP17.06■□□□□ 0.32
PTPA-213ENST00000419582 B4GALT3O60512 393 aa17.06■□□□□ 0.32
PTPA-213ENST00000419582 DDHD2O94830 711 aa17.06■□□□□ 0.32
PTPA-213ENST00000419582 PLEKHA8P1O95397 391 aa17.06■□□□□ 0.32
PTPA-213ENST00000419582 URODP06132 367 aa17.06■□□□□ 0.32
PTPA-213ENST00000419582 PSAPP07602 524 aa17.06■□□□□ 0.32
PTPA-213ENST00000419582 ANTXR2P58335 489 aa17.06■□□□□ 0.32
PTPA-213ENST00000419582 MRPL10Q7Z7H8 261 aaKnown RBP17.06■□□□□ 0.32
PTPA-213ENST00000419582 FGF14Q92915 247 aa17.06■□□□□ 0.32
PTPA-213ENST00000419582 PHKBQ93100 1093 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms