RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 RHOXF2Q9BQY4 288 aa15.8■□□□□ 0.12
HLA-DPA1-242ENST00000419277 MED4Q9NPJ6 270 aa15.8■□□□□ 0.12
HLA-DPA1-242ENST00000419277 TBX20Q9UMR3 447 aa15.8■□□□□ 0.12
HLA-DPA1-242ENST00000419277 TFR2Q9UP52 801 aa15.8■□□□□ 0.12
HLA-DPA1-242ENST00000419277 DIS3Q9Y2L1 958 aaKnown RBP15.8■□□□□ 0.12
HLA-DPA1-242ENST00000419277 RIPK3Q9Y572 518 aa15.8■□□□□ 0.12
HLA-DPA1-242ENST00000419277 ZC3H11AO75152 810 aaKnown RBP eCLIP15.8■□□□□ 0.12
HLA-DPA1-242ENST00000419277 TMEM253P0C7T8 217 aa15.8■□□□□ 0.12
HLA-DPA1-242ENST00000419277 TGFB3P10600 412 aa15.8■□□□□ 0.12
HLA-DPA1-242ENST00000419277 IREB2P48200 963 aaKnown RBP15.8■□□□□ 0.12
HLA-DPA1-242ENST00000419277 MXI1P50539 228 aa15.8■□□□□ 0.12
HLA-DPA1-242ENST00000419277 PEX3P56589 373 aa15.8■□□□□ 0.12
HLA-DPA1-242ENST00000419277 VSNL1P62760 191 aa15.8■□□□□ 0.12
HLA-DPA1-242ENST00000419277 TCEAL1Q15170 157 aa15.8■□□□□ 0.12
HLA-DPA1-242ENST00000419277 FAM102BQ5T8I3 360 aa15.8■□□□□ 0.12
HLA-DPA1-242ENST00000419277 KCNV1Q6PIU1 500 aa15.8■□□□□ 0.12
HLA-DPA1-242ENST00000419277 ANO5Q75V66 913 aa15.8■□□□□ 0.12
HLA-DPA1-242ENST00000419277 ENOSF1Q7L5Y1 443 aa15.8■□□□□ 0.12
HLA-DPA1-242ENST00000419277 RIOX2Q8IUF8 465 aa15.8■□□□□ 0.12
HLA-DPA1-242ENST00000419277 EXOC8Q8IYI6 725 aa15.8■□□□□ 0.12
HLA-DPA1-242ENST00000419277 EIF1ADQ8N9N8 165 aaKnown RBP15.8■□□□□ 0.12
HLA-DPA1-242ENST00000419277 CEP170P1Q96L14 293 aa15.8■□□□□ 0.12
HLA-DPA1-242ENST00000419277 ARID3AQ99856 593 aa15.8■□□□□ 0.12
HLA-DPA1-242ENST00000419277 KMT5AQ9NQR1 393 aa15.8■□□□□ 0.12
HLA-DPA1-242ENST00000419277 DNAJC12Q9UKB3 198 aa15.8■□□□□ 0.12
HLA-DPA1-242ENST00000419277 LRRC37A2A6NM11 1700 aa15.79■□□□□ 0.12
HLA-DPA1-242ENST00000419277 GOLGB1Q14789 3259 aaKnown RBP15.79■□□□□ 0.12
HLA-DPA1-242ENST00000419277 PALMO75781 387 aa15.79■□□□□ 0.12
HLA-DPA1-242ENST00000419277 NPTX2P47972 431 aa15.79■□□□□ 0.12
HLA-DPA1-242ENST00000419277 HADHBP55084 474 aaKnown RBP15.79■□□□□ 0.12
HLA-DPA1-242ENST00000419277 DRAP1Q14919 205 aaPredicted RBP15.79■□□□□ 0.12
HLA-DPA1-242ENST00000419277 UGCGQ16739 394 aa15.79■□□□□ 0.12
HLA-DPA1-242ENST00000419277 CBWD6Q4V339 395 aa15.79■□□□□ 0.12
HLA-DPA1-242ENST00000419277 EPC2Q52LR7 807 aa15.79■□□□□ 0.12
HLA-DPA1-242ENST00000419277 CBWD3Q5JTY5 395 aa15.79■□□□□ 0.12
HLA-DPA1-242ENST00000419277 CBWD5Q5RIA9 395 aa15.79■□□□□ 0.12
HLA-DPA1-242ENST00000419277 ABHD15Q6UXT9 468 aa15.79■□□□□ 0.12
HLA-DPA1-242ENST00000419277 SULF1Q8IWU6 871 aa15.79■□□□□ 0.12
HLA-DPA1-242ENST00000419277 RFFLQ8WZ73 363 aa15.79■□□□□ 0.12
HLA-DPA1-242ENST00000419277 CAPZA3Q96KX2 299 aa15.79■□□□□ 0.12
HLA-DPA1-242ENST00000419277 SYT11Q9BT88 431 aa15.79■□□□□ 0.12
HLA-DPA1-242ENST00000419277 SELENOOQ9BVL4 669 aa15.79■□□□□ 0.12
HLA-DPA1-242ENST00000419277 GABBR1Q9UBS5 961 aa15.79■□□□□ 0.12
HLA-DPA1-242ENST00000419277 COQ4Q9Y3A0 265 aa15.79■□□□□ 0.12
HLA-DPA1-242ENST00000419277 POLR2AP24928 1970 aaKnown RBP15.78■□□□□ 0.12
HLA-DPA1-242ENST00000419277 TULP1O00294 542 aaPredicted RBP15.78■□□□□ 0.12
HLA-DPA1-242ENST00000419277 CXCL11O14625 94 aa15.78■□□□□ 0.12
HLA-DPA1-242ENST00000419277 SRGAP2O75044 1071 aa15.78■□□□□ 0.12
HLA-DPA1-242ENST00000419277 ATG7O95352 703 aa15.78■□□□□ 0.12
HLA-DPA1-242ENST00000419277 SUPT20HL2P0C7V6 817 aa15.78■□□□□ 0.12
HLA-DPA1-242ENST00000419277 ACTR2P61160 394 aa15.78■□□□□ 0.12
HLA-DPA1-242ENST00000419277 PPATQ06203 517 aa15.78■□□□□ 0.12
HLA-DPA1-242ENST00000419277 DGKZQ13574 1117 aa15.78■□□□□ 0.12
HLA-DPA1-242ENST00000419277 PPP2R5EQ16537 467 aa15.78■□□□□ 0.12
HLA-DPA1-242ENST00000419277 SNRNP35Q16560 246 aaKnown RBP15.78■□□□□ 0.12
HLA-DPA1-242ENST00000419277 KRT39Q6A163 491 aa15.78■□□□□ 0.12
HLA-DPA1-242ENST00000419277 RHOT2Q8IXI1 618 aa15.78■□□□□ 0.12
HLA-DPA1-242ENST00000419277 SLC30A5Q8TAD4 765 aa15.78■□□□□ 0.12
HLA-DPA1-242ENST00000419277 CTNNBL1Q8WYA6 563 aaPredicted RBP15.78■□□□□ 0.12
HLA-DPA1-242ENST00000419277 DCPSQ96C86 337 aaKnown RBP15.78■□□□□ 0.12
HLA-DPA1-242ENST00000419277 PDLIM7Q9NR12 457 aa15.78■□□□□ 0.12
HLA-DPA1-242ENST00000419277 CYP26B1Q9NR63 512 aa15.78■□□□□ 0.12
HLA-DPA1-242ENST00000419277 SALL4Q9UJQ4 1053 aa15.78■□□□□ 0.12
HLA-DPA1-242ENST00000419277 SNCAIPQ9Y6H5 919 aa15.78■□□□□ 0.12
HLA-DPA1-242ENST00000419277 EMSYQ7Z589 1322 aa15.78■□□□□ 0.12
HLA-DPA1-242ENST00000419277 GAS2O43903 313 aaKnown RBP15.77■□□□□ 0.12
HLA-DPA1-242ENST00000419277 SLC25A27O95847 323 aa15.77■□□□□ 0.12
HLA-DPA1-242ENST00000419277 CNGA1P29973 690 aa15.77■□□□□ 0.12
HLA-DPA1-242ENST00000419277 NF2P35240 595 aa15.77■□□□□ 0.12
HLA-DPA1-242ENST00000419277 RFC5P40937 340 aa15.77■□□□□ 0.12
HLA-DPA1-242ENST00000419277 PLA2G4AP47712 749 aa15.77■□□□□ 0.12
HLA-DPA1-242ENST00000419277 TNNC1P63316 161 aa15.77■□□□□ 0.12
HLA-DPA1-242ENST00000419277 PRKCEQ02156 737 aa15.77■□□□□ 0.12
HLA-DPA1-242ENST00000419277 NEDD9Q14511 834 aa15.77■□□□□ 0.12
HLA-DPA1-242ENST00000419277 SMC1AQ14683 1233 aaKnown RBP15.77■□□□□ 0.12
HLA-DPA1-242ENST00000419277 RPS6KA1Q15418 735 aa15.77■□□□□ 0.12
HLA-DPA1-242ENST00000419277 HSP90B2PQ58FF3 399 aa15.77■□□□□ 0.12
HLA-DPA1-242ENST00000419277 SLFN11Q7Z7L1 901 aa15.77■□□□□ 0.12
HLA-DPA1-242ENST00000419277 LRRC57Q8N9N7 239 aa15.77■□□□□ 0.12
HLA-DPA1-242ENST00000419277 LMO3Q8TAP4 145 aa15.77■□□□□ 0.12
HLA-DPA1-242ENST00000419277 WNK4Q96J92 1243 aa15.77■□□□□ 0.12
HLA-DPA1-242ENST00000419277 ZFP91Q96JP5 570 aaPredicted RBP15.77■□□□□ 0.12
HLA-DPA1-242ENST00000419277 TMEM8AQ9HCN3 771 aa15.77■□□□□ 0.12
HLA-DPA1-242ENST00000419277 ARHGAP28Q9P2N2 729 aa15.77■□□□□ 0.12
HLA-DPA1-242ENST00000419277 SCAF8Q9UPN6 1271 aaKnown RBP15.77■□□□□ 0.12
HLA-DPA1-242ENST00000419277 DENND3A2RUS2 1198 aa15.77■□□□□ 0.11
HLA-DPA1-242ENST00000419277 ANKRD62A6NC57 917 aa15.77■□□□□ 0.11
HLA-DPA1-242ENST00000419277 CCDC169A6NNP5 214 aa15.77■□□□□ 0.11
HLA-DPA1-242ENST00000419277 IRF6O14896 467 aa15.77■□□□□ 0.11
HLA-DPA1-242ENST00000419277 SLC16A4O15374 487 aa15.77■□□□□ 0.11
HLA-DPA1-242ENST00000419277 BUB1O43683 1085 aa15.77■□□□□ 0.11
HLA-DPA1-242ENST00000419277 USP2O75604 605 aaPredicted RBP15.77■□□□□ 0.11
HLA-DPA1-242ENST00000419277 RGS20O76081 388 aa15.77■□□□□ 0.11
HLA-DPA1-242ENST00000419277 SEC31AO94979 1220 aaKnown RBP15.77■□□□□ 0.11
HLA-DPA1-242ENST00000419277 EDNRBP24530 442 aa15.77■□□□□ 0.11
HLA-DPA1-242ENST00000419277 VGLL4Q14135 290 aa15.77■□□□□ 0.11
HLA-DPA1-242ENST00000419277 C8orf74Q6P047 294 aa15.77■□□□□ 0.11
HLA-DPA1-242ENST00000419277 NFRKBQ6P4R8 1299 aa15.77■□□□□ 0.11
HLA-DPA1-242ENST00000419277 EMBQ6PCB8 327 aa15.77■□□□□ 0.11
HLA-DPA1-242ENST00000419277 ANKRD35Q8N283 1001 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms