RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 KRT13P13646 458 aa9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 FERP16591 822 aa9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 GARTP22102 1010 aa9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 RFC5P40937 340 aa9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 MAGEA1P43355 309 aa9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 FKBP1BP68106 108 aa9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 KLHL30Q0D2K2 578 aa9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 EMC2Q15006 297 aa9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 CBWD6Q4V339 395 aa9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 TDRD12Q587J7 1177 aaKnown RBP9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 BRDTQ58F21 947 aaPredicted RBP9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 CBWD3Q5JTY5 395 aa9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 CBWD5Q5RIA9 395 aa9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 IQCEQ6IPM2 695 aa9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 SLC39A4Q6P5W5 647 aa9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 CYFIP1Q7L576 1253 aa9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 MAEAQ7L5Y9 396 aa9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 TAS1R3Q7RTX0 852 aa9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 RNF10Q8N5U6 811 aaKnown RBP9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 TMC2Q8TDI7 906 aa9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 SECISBP2LQ93073 1101 aaKnown RBP9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 FAM167AQ96KS9 214 aa9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 SYT11Q9BT88 431 aa9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 PAGR1Q9BTK6 254 aa9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 STK33Q9BYT3 514 aa9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 INTS2Q9H0H0 1204 aaKnown RBP9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 KMT5AQ9NQR1 393 aa9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 APEX2Q9UBZ4 518 aa9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 SEPT9Q9UHD8 586 aaPredicted RBP9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 AJAP1Q9UKB5 411 aaPredicted RBP9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 PNMA3Q9UL41 463 aa9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 STYXL1Q9Y6J8 313 aa9.87□□□□□ -0.83
LINCMD1-201ENST00000418518 EMSYQ7Z589 1322 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 DENND3A2RUS2 1198 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 TISP43B9A030 160 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 ANKRD63C9JTQ0 380 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 KIAA0391O15091 583 aaKnown RBP9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 MGAMO43451 1857 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 TACC1O75410 805 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 TRIM49P0CI25 452 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 TRIM49CP0CI26 452 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 ADSSP30520 456 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 GTF2H1P32780 548 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 SOX5P35711 763 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 ARL2P36404 184 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 VAMP7P51809 220 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 ERVK-9P63128 1117 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 RBM10P98175 930 aaKnown RBP9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 TTLL12Q14166 644 aaPredicted RBP9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 ERCC6LQ2NKX8 1250 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 FAM160B1Q5W0V3 765 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 SEPT14Q6ZU15 432 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 ZNF572Q7Z3I7 529 aaPredicted RBP9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 PDCL2Q8N4E4 241 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 GPR161Q8N6U8 529 aaKnown RBP9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 PLEKHO2Q8TD55 490 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 UBXN4Q92575 508 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 RABGGTAQ92696 567 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 KAT6AQ92794 2004 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 IFT74Q96LB3 600 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 MFSD14AQ96MC6 490 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 SPAG5Q96R06 1193 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 MMP19Q99542 508 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 SH2D3AQ9BRG2 576 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 GPR88Q9GZN0 384 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 POLR3FQ9H1D9 316 aaPredicted RBP9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 PORCNQ9H237 461 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 PDCL3Q9H2J4 239 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 R3HDMLQ9H3Y0 253 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 DDX41Q9UJV9 622 aaKnown RBP9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 INTUQ9ULD6 942 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 TFR2Q9UP52 801 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 COQ4Q9Y3A0 265 aa9.86□□□□□ -0.83
LINCMD1-201ENST00000418518 A0A087X0T9 212 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 CCDC169A6NNP5 214 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 F8VZ95 297 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 GAS2O43903 313 aaKnown RBP9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 GGPS1O95749 300 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 ATP1A1P05023 1023 aaKnown RBP9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 FAM228BP0C875 321 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 PRLRP16471 622 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 CNGA1P29973 690 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 STAT1P42224 750 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 NAMPTP43490 491 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 CHMP4BP1P59074 171 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 PTK2Q05397 1052 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 GFPT1Q06210 699 aaPredicted RBP9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 PPP3CAQ08209 521 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 HSP90AA2PQ14568 343 aaPredicted RBP9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 KCTD2Q14681 263 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 BMS1Q14692 1282 aaKnown RBP9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 KIF22Q14807 665 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 NAB2Q15742 525 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 Q3C1V9 767 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 CELF3Q5SZQ8 465 aaKnown RBP9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 CCDC62Q6P9F0 684 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 PLPPR4Q7Z2D5 763 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 ZNF571Q7Z3V5 609 aaPredicted RBP9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 ABRAQ8N0Z2 381 aa9.85□□□□□ -0.83
LINCMD1-201ENST00000418518 MSANTD4Q8NCY6 345 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms