RNA–Protein interactions for RNA: ENST00000418373.1

PDLIM4-203, Transcript of PDZ and LIM domain 4, humanhuman

TSL 5

Gene PDLIM4, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-203ENST00000418373 KCNMB3Q9NPA1 279 aa14.31□□□□□ -0.12
PDLIM4-203ENST00000418373 FAM105AQ9NUU6 356 aa14.31□□□□□ -0.12
PDLIM4-203ENST00000418373 SUCLA2Q9P2R7 463 aaPredicted RBP14.31□□□□□ -0.12
PDLIM4-203ENST00000418373 DDX25Q9UHL0 483 aaKnown RBP14.31□□□□□ -0.12
PDLIM4-203ENST00000418373 PIN4Q9Y237 131 aaKnown RBP14.31□□□□□ -0.12
PDLIM4-203ENST00000418373 NR2E1Q9Y466 385 aa14.31□□□□□ -0.12
PDLIM4-203ENST00000418373 SPTBN4Q9H254 2564 aa14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 C2CD4DB7Z1M9 353 aa14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 ZC3H11AO75152 810 aaKnown RBP eCLIP14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 OFD1O75665 1012 aa14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 GALTP07902 379 aa14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 CTSAP10619 480 aa14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 SKIP12755 728 aa14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 SP100P23497 879 aaPredicted RBP14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 RAB27AP51159 221 aa14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 PSMC5P62195 406 aa14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 PPP2R5CQ13362 524 aa14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 NONOQ15233 471 aaKnown RBP eCLIP14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 INF2Q27J81 1249 aa14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 PLA2G4FQ68DD2 849 aa14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 CES5AQ6NT32 575 aa14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 GLB1LQ6UWU2 654 aa14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 DDX53Q86TM3 631 aaKnown RBP14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 KREMEN2Q8NCW0 462 aa14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 SLC22A17Q8WUG5 538 aa14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 AUTS2Q8WXX7 1259 aa14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 TM6SF1Q9BZW5 370 aa14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 INO80BQ9C086 356 aaPredicted RBP14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 NRDE2Q9H7Z3 1164 aa14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 CYP26B1Q9NR63 512 aa14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 AGPAT5Q9NUQ2 364 aa14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 WRAP73Q9P2S5 460 aaPredicted RBP14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 TDRD15B5MCY1 1934 aaKnown RBP14.3□□□□□ -0.12
PDLIM4-203ENST00000418373 CARNS1A5YM72 827 aa14.29□□□□□ -0.12
PDLIM4-203ENST00000418373 DDX11L8A8MPP1 907 aa14.29□□□□□ -0.12
PDLIM4-203ENST00000418373 CPLX1O14810 134 aa14.29□□□□□ -0.12
PDLIM4-203ENST00000418373 CXCL14O95715 111 aa14.29□□□□□ -0.12
PDLIM4-203ENST00000418373 PDGFBP01127 241 aaPredicted RBP14.29□□□□□ -0.12
PDLIM4-203ENST00000418373 EPCAMP16422 314 aa14.29□□□□□ -0.12
PDLIM4-203ENST00000418373 AVPR2P30518 371 aa14.29□□□□□ -0.12
PDLIM4-203ENST00000418373 LONRF3Q496Y0 759 aa14.29□□□□□ -0.12
PDLIM4-203ENST00000418373 NOMO2Q5JPE7 1267 aa14.29□□□□□ -0.12
PDLIM4-203ENST00000418373 KIAA1841Q6NSI8 718 aa14.29□□□□□ -0.12
PDLIM4-203ENST00000418373 KRT25Q7Z3Z0 450 aa14.29□□□□□ -0.12
PDLIM4-203ENST00000418373 ZNF579Q8NAF0 562 aaKnown RBP14.29□□□□□ -0.12
PDLIM4-203ENST00000418373 RIPOR3Q96MK2 946 aa14.29□□□□□ -0.12
PDLIM4-203ENST00000418373 NLRP4Q96MN2 994 aa14.29□□□□□ -0.12
PDLIM4-203ENST00000418373 DHX33Q9H6R0 707 aaKnown RBP14.29□□□□□ -0.12
PDLIM4-203ENST00000418373 TSHZ2Q9NRE2 1034 aa14.29□□□□□ -0.12
PDLIM4-203ENST00000418373 DZANK1Q9NVP4 752 aa14.29□□□□□ -0.12
PDLIM4-203ENST00000418373 DNAJB4Q9UDY4 337 aa14.29□□□□□ -0.12
PDLIM4-203ENST00000418373 SORCS3Q9UPU3 1222 aa14.29□□□□□ -0.12
PDLIM4-203ENST00000418373 CYP46A1Q9Y6A2 500 aa14.29□□□□□ -0.12
PDLIM4-203ENST00000418373 WDR87Q6ZQQ6 2873 aa14.29□□□□□ -0.12
PDLIM4-203ENST00000418373 FAM186AA6NE01 2351 aa14.29□□□□□ -0.12
PDLIM4-203ENST00000418373 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 BRD1O95696 1058 aa14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 WEE2P0C1S8 567 aa14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 PTPRZ1P23471 2315 aaPredicted RBP14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 MTHFRP42898 656 aa14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 QARSP47897 775 aaKnown RBP14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 SLC11A1P49279 550 aa14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 NPEPPSP55786 919 aa14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 MTMR3Q13615 1198 aa14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 GIT2Q14161 759 aa14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 PTPN14Q15678 1187 aa14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 PPP4R3AQ6IN85 833 aa14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 AGMOQ6ZNB7 445 aa14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 CATSPER4Q7RTX7 472 aa14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 MRPL10Q7Z7H8 261 aaKnown RBP14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 UBALD2Q8IYN6 164 aa14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 C12orf76Q8N812 135 aaPredicted RBP14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 DOCK8Q8NF50 2099 aa14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 FEZF2Q8TBJ5 459 aa14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 FAM20AQ96MK3 541 aa14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 JPH2Q9BR39 696 aaPredicted RBP14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 LARP6Q9BRS8 491 aaKnown RBP14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 PHF20Q9BVI0 1012 aa14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 MINDY3Q9H8M7 445 aa14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 KCNJ14Q9UNX9 436 aa14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 PCDHB2Q9Y5E7 798 aa14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 COL4A3BPQ9Y5P4 624 aa14.28□□□□□ -0.12
PDLIM4-203ENST00000418373 MTCL1Q9Y4B5 1905 aaKnown RBP14.27□□□□□ -0.12
PDLIM4-203ENST00000418373 HOXA11P31270 313 aaPredicted RBP14.27□□□□□ -0.13
PDLIM4-203ENST00000418373 AFF1P51825 1210 aaKnown RBP14.27□□□□□ -0.13
PDLIM4-203ENST00000418373 NUBP1P53384 320 aa14.27□□□□□ -0.13
PDLIM4-203ENST00000418373 SPIRE1Q08AE8 756 aa14.27□□□□□ -0.13
PDLIM4-203ENST00000418373 BMS1Q14692 1282 aaKnown RBP14.27□□□□□ -0.13
PDLIM4-203ENST00000418373 LETM2Q2VYF4 491 aa14.27□□□□□ -0.13
PDLIM4-203ENST00000418373 UBXN11Q5T124 520 aa14.27□□□□□ -0.13
PDLIM4-203ENST00000418373 RARS2Q5T160 578 aaKnown RBP14.27□□□□□ -0.13
PDLIM4-203ENST00000418373 KANK3Q6NY19 840 aa14.27□□□□□ -0.13
PDLIM4-203ENST00000418373 ZBTB33Q86T24 672 aa14.27□□□□□ -0.13
PDLIM4-203ENST00000418373 ZNF280BQ86YH2 543 aa14.27□□□□□ -0.13
PDLIM4-203ENST00000418373 ZDHHC14Q8IZN3 488 aa14.27□□□□□ -0.13
PDLIM4-203ENST00000418373 SLC7A3Q8WY07 619 aa14.27□□□□□ -0.13
PDLIM4-203ENST00000418373 HAS1Q92839 578 aa14.27□□□□□ -0.13
PDLIM4-203ENST00000418373 SMOC2Q9H3U7 446 aa14.27□□□□□ -0.13
PDLIM4-203ENST00000418373 USTQ9Y2C2 406 aa14.27□□□□□ -0.13
PDLIM4-203ENST00000418373 INPP5FQ9Y2H2 1132 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms