RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 VN1R2Q8NFZ6 395 aa15.81■□□□□ 0.12
LINC01006-202ENST00000418309 TMEM143Q96AN5 459 aa15.81■□□□□ 0.12
LINC01006-202ENST00000418309 DYDC2Q96IM9 177 aa15.81■□□□□ 0.12
LINC01006-202ENST00000418309 LXNQ9BS40 222 aa15.81■□□□□ 0.12
LINC01006-202ENST00000418309 BMP2KQ9NSY1 1161 aaPredicted RBP15.81■□□□□ 0.12
LINC01006-202ENST00000418309 RGL1Q9NZL6 768 aa15.81■□□□□ 0.12
LINC01006-202ENST00000418309 INPP5FQ9Y2H2 1132 aa15.81■□□□□ 0.12
LINC01006-202ENST00000418309 ARIH1Q9Y4X5 557 aaPredicted RBP15.81■□□□□ 0.12
LINC01006-202ENST00000418309 COL4A3BPQ9Y5P4 624 aa15.81■□□□□ 0.12
LINC01006-202ENST00000418309 FAM205CA6NFA0 338 aa15.8■□□□□ 0.12
LINC01006-202ENST00000418309 ZC3H11AO75152 810 aaKnown RBP eCLIP15.8■□□□□ 0.12
LINC01006-202ENST00000418309 YWHABP31946 246 aaKnown RBP15.8■□□□□ 0.12
LINC01006-202ENST00000418309 RFC5P40937 340 aa15.8■□□□□ 0.12
LINC01006-202ENST00000418309 FOSBP53539 338 aa15.8■□□□□ 0.12
LINC01006-202ENST00000418309 CYP4A11Q02928 519 aa15.8■□□□□ 0.12
LINC01006-202ENST00000418309 RNASELQ05823 741 aaKnown RBP15.8■□□□□ 0.12
LINC01006-202ENST00000418309 CTTNQ14247 550 aaKnown RBP15.8■□□□□ 0.12
LINC01006-202ENST00000418309 SMC1AQ14683 1233 aaKnown RBP15.8■□□□□ 0.12
LINC01006-202ENST00000418309 ME3Q16798 604 aa15.8■□□□□ 0.12
LINC01006-202ENST00000418309 XKR9Q5GH70 373 aa15.8■□□□□ 0.12
LINC01006-202ENST00000418309 GLB1LQ6UWU2 654 aa15.8■□□□□ 0.12
LINC01006-202ENST00000418309 TPH2Q8IWU9 490 aa15.8■□□□□ 0.12
LINC01006-202ENST00000418309 C4orf19Q8IY42 314 aa15.8■□□□□ 0.12
LINC01006-202ENST00000418309 SLC39A11Q8N1S5 342 aa15.8■□□□□ 0.12
LINC01006-202ENST00000418309 TMEM87AQ8NBN3 555 aa15.8■□□□□ 0.12
LINC01006-202ENST00000418309 PRPF31Q8WWY3 499 aaKnown RBP15.8■□□□□ 0.12
LINC01006-202ENST00000418309 PSPC1Q8WXF1 523 aaKnown RBP15.8■□□□□ 0.12
LINC01006-202ENST00000418309 TMEM169Q96HH4 297 aa15.8■□□□□ 0.12
LINC01006-202ENST00000418309 RPGRIP1Q96KN7 1286 aa15.8■□□□□ 0.12
LINC01006-202ENST00000418309 TRAIPQ9BWF2 469 aa15.8■□□□□ 0.12
LINC01006-202ENST00000418309 APOL5Q9BWW9 433 aa15.8■□□□□ 0.12
LINC01006-202ENST00000418309 PHF7Q9BWX1 381 aaPredicted RBP15.8■□□□□ 0.12
LINC01006-202ENST00000418309 IFT122Q9HBG6 1241 aa15.8■□□□□ 0.12
LINC01006-202ENST00000418309 FAM105AQ9NUU6 356 aa15.8■□□□□ 0.12
LINC01006-202ENST00000418309 WRAP73Q9P2S5 460 aaPredicted RBP15.8■□□□□ 0.12
LINC01006-202ENST00000418309 PPME1Q9Y570 386 aa15.8■□□□□ 0.12
LINC01006-202ENST00000418309 FDPSP14324 419 aaKnown RBP15.79■□□□□ 0.12
LINC01006-202ENST00000418309 RAB27AP51159 221 aa15.79■□□□□ 0.12
LINC01006-202ENST00000418309 NEK4P51957 841 aa15.79■□□□□ 0.12
LINC01006-202ENST00000418309 LAMTOR4Q0VGL1 99 aa15.79■□□□□ 0.12
LINC01006-202ENST00000418309 TRIM29Q14134 588 aa15.79■□□□□ 0.12
LINC01006-202ENST00000418309 HERC4Q5GLZ8 1057 aaPredicted RBP15.79■□□□□ 0.12
LINC01006-202ENST00000418309 NOMO2Q5JPE7 1267 aa15.79■□□□□ 0.12
LINC01006-202ENST00000418309 ANKRD54Q6NXT1 300 aa15.79■□□□□ 0.12
LINC01006-202ENST00000418309 SRGAP1Q7Z6B7 1085 aa15.79■□□□□ 0.12
LINC01006-202ENST00000418309 TCP11Q8WWU5 503 aa15.79■□□□□ 0.12
LINC01006-202ENST00000418309 GTF3C6Q969F1 213 aa15.79■□□□□ 0.12
LINC01006-202ENST00000418309 PGBD4Q96DM1 585 aa15.79■□□□□ 0.12
LINC01006-202ENST00000418309 GBP3Q9H0R5 595 aa15.79■□□□□ 0.12
LINC01006-202ENST00000418309 DHX33Q9H6R0 707 aaKnown RBP15.79■□□□□ 0.12
LINC01006-202ENST00000418309 ZSWIM4Q9H7M6 989 aa15.79■□□□□ 0.12
LINC01006-202ENST00000418309 C5orf42Q9H799 3197 aa15.79■□□□□ 0.12
LINC01006-202ENST00000418309 MEIS3P2A8K0S8 358 aa15.78■□□□□ 0.12
LINC01006-202ENST00000418309 LOC730098B7Z3J9 87 aa15.78■□□□□ 0.12
LINC01006-202ENST00000418309 ZBTB39O15060 712 aa15.78■□□□□ 0.12
LINC01006-202ENST00000418309 EIF5BO60841 1220 aaKnown RBP15.78■□□□□ 0.12
LINC01006-202ENST00000418309 LARGE1O95461 756 aa15.78■□□□□ 0.12
LINC01006-202ENST00000418309 CXCL14O95715 111 aa15.78■□□□□ 0.12
LINC01006-202ENST00000418309 EMC2Q15006 297 aa15.78■□□□□ 0.12
LINC01006-202ENST00000418309 CALCRLQ16602 461 aa15.78■□□□□ 0.12
LINC01006-202ENST00000418309 TMEM184AQ6ZMB5 413 aa15.78■□□□□ 0.12
LINC01006-202ENST00000418309 MRPL43Q8N983 215 aaKnown RBP15.78■□□□□ 0.12
LINC01006-202ENST00000418309 RSPH1Q8WYR4 309 aa15.78■□□□□ 0.12
LINC01006-202ENST00000418309 MTRQ99707 1265 aa15.78■□□□□ 0.12
LINC01006-202ENST00000418309 AGPAT5Q9NUQ2 364 aa15.78■□□□□ 0.12
LINC01006-202ENST00000418309 PCDHA12Q9UN75 941 aa15.78■□□□□ 0.12
LINC01006-202ENST00000418309 PCDHB2Q9Y5E7 798 aa15.78■□□□□ 0.12
LINC01006-202ENST00000418309 C2orf71A6NGG8 1288 aa15.77■□□□□ 0.12
LINC01006-202ENST00000418309 BTBD18B2RXH4 712 aa15.77■□□□□ 0.12
LINC01006-202ENST00000418309 ASAP2O43150 1006 aa15.77■□□□□ 0.12
LINC01006-202ENST00000418309 GAS2O43903 313 aaKnown RBP15.77■□□□□ 0.12
LINC01006-202ENST00000418309 ZNF623O75123 536 aa15.77■□□□□ 0.12
LINC01006-202ENST00000418309 OFD1O75665 1012 aa15.77■□□□□ 0.12
LINC01006-202ENST00000418309 KCNC3Q14003 757 aa15.77■□□□□ 0.12
LINC01006-202ENST00000418309 VPS52Q8N1B4 723 aa15.77■□□□□ 0.12
LINC01006-202ENST00000418309 RNF149Q8NC42 400 aa15.77■□□□□ 0.12
LINC01006-202ENST00000418309 NSUN7Q8NE18 718 aaKnown RBP15.77■□□□□ 0.12
LINC01006-202ENST00000418309 URGCPQ8TCY9 931 aa15.77■□□□□ 0.12
LINC01006-202ENST00000418309 EDAQ92838 391 aa15.77■□□□□ 0.12
LINC01006-202ENST00000418309 CASP10Q92851 521 aa15.77■□□□□ 0.12
LINC01006-202ENST00000418309 EIF2AK1Q9BQI3 630 aaKnown RBP15.77■□□□□ 0.12
LINC01006-202ENST00000418309 S1PR5Q9H228 398 aa15.77■□□□□ 0.12
LINC01006-202ENST00000418309 NRDE2Q9H7Z3 1164 aa15.77■□□□□ 0.12
LINC01006-202ENST00000418309 MINDY3Q9H8M7 445 aa15.77■□□□□ 0.12
LINC01006-202ENST00000418309 TBC1D13Q9NVG8 400 aa15.77■□□□□ 0.12
LINC01006-202ENST00000418309 CARNS1A5YM72 827 aa15.76■□□□□ 0.11
LINC01006-202ENST00000418309 JAK2O60674 1132 aa15.76■□□□□ 0.11
LINC01006-202ENST00000418309 SLITRK3O94933 977 aa15.76■□□□□ 0.11
LINC01006-202ENST00000418309 HOXB8P17481 243 aaPredicted RBP15.76■□□□□ 0.11
LINC01006-202ENST00000418309 TXKP42681 527 aa15.76■□□□□ 0.11
LINC01006-202ENST00000418309 SPIRE1Q08AE8 756 aa15.76■□□□□ 0.11
LINC01006-202ENST00000418309 CBX2Q14781 532 aaPredicted RBP15.76■□□□□ 0.11
LINC01006-202ENST00000418309 TPRNQ4KMQ1 711 aa15.76■□□□□ 0.11
LINC01006-202ENST00000418309 ERICH6BQ5W0A0 696 aa15.76■□□□□ 0.11
LINC01006-202ENST00000418309 SYCE2Q6PIF2 218 aa15.76■□□□□ 0.11
LINC01006-202ENST00000418309 FERMT3Q86UX7 667 aa15.76■□□□□ 0.11
LINC01006-202ENST00000418309 DIS3L2Q8IYB7 885 aaKnown RBP15.76■□□□□ 0.11
LINC01006-202ENST00000418309 SUSD6Q92537 303 aa15.76■□□□□ 0.11
LINC01006-202ENST00000418309 TNFRSF25Q93038 417 aa15.76■□□□□ 0.11
LINC01006-202ENST00000418309 IGSF21Q96ID5 467 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms