RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	AGPAT5	Q9NUQ2	364 aa		18.2	■□□□□ 0.5
DDR1-231	ENST00000417521	EVPL	Q92817	2033 aa		18.2	■□□□□ 0.5
DDR1-231	ENST00000417521		A0A087WWV3	80 aa		18.2	■□□□□ 0.5
DDR1-231	ENST00000417521	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	18.2	■□□□□ 0.5
DDR1-231	ENST00000417521	ATF7	P17544	494 aa	Predicted RBP	18.2	■□□□□ 0.5
DDR1-231	ENST00000417521	RAB27A	P51159	221 aa		18.2	■□□□□ 0.5
DDR1-231	ENST00000417521	FOXD4L5	Q5VV16	416 aa	Predicted RBP	18.2	■□□□□ 0.5
DDR1-231	ENST00000417521	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	18.2	■□□□□ 0.5
DDR1-231	ENST00000417521	CWH43	Q9H720	699 aa		18.2	■□□□□ 0.5
DDR1-231	ENST00000417521	DAXX	Q9UER7	740 aa	Predicted RBP	18.2	■□□□□ 0.5
DDR1-231	ENST00000417521	NCK2	O43639	380 aa		18.19	■□□□□ 0.5
DDR1-231	ENST00000417521	USO1	O60763	962 aa	Known RBP	18.19	■□□□□ 0.5
DDR1-231	ENST00000417521	BMP1	P13497	986 aa		18.19	■□□□□ 0.5
DDR1-231	ENST00000417521	LAG3	P18627	525 aa		18.19	■□□□□ 0.5
DDR1-231	ENST00000417521	HOXA11	P31270	313 aa	Predicted RBP	18.19	■□□□□ 0.5
DDR1-231	ENST00000417521	UBE3A	Q05086	875 aa		18.19	■□□□□ 0.5
DDR1-231	ENST00000417521	REST	Q13127	1097 aa		18.19	■□□□□ 0.5
DDR1-231	ENST00000417521	CAMK1	Q14012	370 aa		18.19	■□□□□ 0.5
DDR1-231	ENST00000417521	TCEAL5	Q5H9L2	206 aa		18.19	■□□□□ 0.5
DDR1-231	ENST00000417521	CLLU1OS	Q5K130	101 aa		18.19	■□□□□ 0.5
DDR1-231	ENST00000417521	POTEG	Q6S5H5	508 aa		18.19	■□□□□ 0.5
DDR1-231	ENST00000417521	LRRC43	Q8N309	656 aa		18.19	■□□□□ 0.5
DDR1-231	ENST00000417521	MCPH1	Q8NEM0	835 aa		18.19	■□□□□ 0.5
DDR1-231	ENST00000417521	NFKBIZ	Q9BYH8	718 aa		18.19	■□□□□ 0.5
DDR1-231	ENST00000417521	UBE2Z	Q9H832	354 aa	Predicted RBP	18.19	■□□□□ 0.5
DDR1-231	ENST00000417521	FAM105A	Q9NUU6	356 aa		18.19	■□□□□ 0.5
DDR1-231	ENST00000417521	TTC28	Q96AY4	2481 aa		18.19	■□□□□ 0.5
DDR1-231	ENST00000417521	XIRP2	A4UGR9	3374 aa		18.18	■□□□□ 0.5
DDR1-231	ENST00000417521	GLRA2	P23416	452 aa		18.18	■□□□□ 0.5
DDR1-231	ENST00000417521	CCT6A	P40227	531 aa	Known RBP	18.18	■□□□□ 0.5
DDR1-231	ENST00000417521	CAPS	Q13938	189 aa		18.18	■□□□□ 0.5
DDR1-231	ENST00000417521	DTHD1	Q6ZMT9	781 aa		18.18	■□□□□ 0.5
DDR1-231	ENST00000417521	LRRC55	Q6ZSA7	311 aa		18.18	■□□□□ 0.5
DDR1-231	ENST00000417521	COLGALT1	Q8NBJ5	622 aa		18.18	■□□□□ 0.5
DDR1-231	ENST00000417521	ASAP3	Q8TDY4	903 aa		18.18	■□□□□ 0.5
DDR1-231	ENST00000417521	POF1B	Q8WVV4	589 aa		18.18	■□□□□ 0.5
DDR1-231	ENST00000417521	MRPL9	Q9BYD2	267 aa	Known RBP	18.18	■□□□□ 0.5
DDR1-231	ENST00000417521	AXL	P30530	894 aa		18.17	■□□□□ 0.5
DDR1-231	ENST00000417521	NCBP1	Q09161	790 aa	Known RBP	18.17	■□□□□ 0.5
DDR1-231	ENST00000417521	COL19A1	Q14993	1142 aa		18.17	■□□□□ 0.5
DDR1-231	ENST00000417521	HELQ	Q8TDG4	1101 aa		18.17	■□□□□ 0.5
DDR1-231	ENST00000417521	PGBD4	Q96DM1	585 aa		18.17	■□□□□ 0.5
DDR1-231	ENST00000417521	POLR3F	Q9H1D9	316 aa	Predicted RBP	18.17	■□□□□ 0.5
DDR1-231	ENST00000417521	HCST	Q9UBK5	93 aa		18.17	■□□□□ 0.5
DDR1-231	ENST00000417521	ARHGEF35	A5YM69	484 aa		18.16	■□□□□ 0.5
DDR1-231	ENST00000417521	INO80B-WBP1	J3KQ70	363 aa		18.16	■□□□□ 0.5
DDR1-231	ENST00000417521	FGF18	O76093	207 aa		18.16	■□□□□ 0.5
DDR1-231	ENST00000417521	ERLIN2	O94905	339 aa		18.16	■□□□□ 0.5
DDR1-231	ENST00000417521	ZSCAN22	P10073	491 aa	Predicted RBP	18.16	■□□□□ 0.5
DDR1-231	ENST00000417521	CYP11B2	P19099	503 aa		18.16	■□□□□ 0.5
DDR1-231	ENST00000417521	COL9A1	P20849	921 aa		18.16	■□□□□ 0.5
DDR1-231	ENST00000417521	DNAJB1	P25685	340 aa		18.16	■□□□□ 0.5
DDR1-231	ENST00000417521	ATP2C1	P98194	919 aa	Predicted RBP	18.16	■□□□□ 0.5
DDR1-231	ENST00000417521	PLCB3	Q01970	1234 aa		18.16	■□□□□ 0.5
DDR1-231	ENST00000417521	ECM1	Q16610	540 aa		18.16	■□□□□ 0.5
DDR1-231	ENST00000417521	KRT79	Q5XKE5	535 aa		18.16	■□□□□ 0.5
DDR1-231	ENST00000417521	FAM173B	Q6P4H8	233 aa		18.16	■□□□□ 0.5
DDR1-231	ENST00000417521	PADI6	Q6TGC4	694 aa		18.16	■□□□□ 0.5
DDR1-231	ENST00000417521	BRAP	Q7Z569	592 aa		18.16	■□□□□ 0.5
DDR1-231	ENST00000417521	MRPL10	Q7Z7H8	261 aa	Known RBP	18.16	■□□□□ 0.5
DDR1-231	ENST00000417521	THNSL1	Q8IYQ7	743 aa		18.16	■□□□□ 0.5
DDR1-231	ENST00000417521	SNX29	Q8TEQ0	813 aa		18.16	■□□□□ 0.5
DDR1-231	ENST00000417521	PPP2R3C	Q969Q6	453 aa		18.16	■□□□□ 0.5
DDR1-231	ENST00000417521	PABPC5	Q96DU9	382 aa	Known RBP	18.16	■□□□□ 0.5
DDR1-231	ENST00000417521	KIAA1024	Q9UPX6	916 aa		18.16	■□□□□ 0.5
DDR1-231	ENST00000417521	PCDHB2	Q9Y5E7	798 aa		18.16	■□□□□ 0.5
DDR1-231	ENST00000417521	DDIT3	P35638	169 aa		18.15	■□□□□ 0.5
DDR1-231	ENST00000417521	PPM1A	P35813	382 aa		18.15	■□□□□ 0.5
DDR1-231	ENST00000417521	KCNQ1	P51787	676 aa		18.15	■□□□□ 0.5
DDR1-231	ENST00000417521	MBTD1	Q05BQ5	628 aa		18.15	■□□□□ 0.5
DDR1-231	ENST00000417521	IL17A	Q16552	155 aa		18.15	■□□□□ 0.5
DDR1-231	ENST00000417521	UBXN11	Q5T124	520 aa		18.15	■□□□□ 0.5
DDR1-231	ENST00000417521	KCNT2	Q6UVM3	1135 aa		18.15	■□□□□ 0.5
DDR1-231	ENST00000417521	GLB1L	Q6UWU2	654 aa		18.15	■□□□□ 0.5
DDR1-231	ENST00000417521	MAEA	Q7L5Y9	396 aa		18.15	■□□□□ 0.5
DDR1-231	ENST00000417521	CNNM3	Q8NE01	707 aa		18.15	■□□□□ 0.5
DDR1-231	ENST00000417521	ADAMTS19	Q8TE59	1207 aa		18.15	■□□□□ 0.5
DDR1-231	ENST00000417521	CCDC51	Q96ER9	411 aa		18.15	■□□□□ 0.5
DDR1-231	ENST00000417521	ZNF558	Q96NG5	402 aa		18.15	■□□□□ 0.5
DDR1-231	ENST00000417521	GPRC5C	Q9NQ84	441 aa		18.15	■□□□□ 0.5
DDR1-231	ENST00000417521	LZTS1	Q9Y250	596 aa		18.15	■□□□□ 0.5
DDR1-231	ENST00000417521	ZDHHC9	Q9Y397	364 aa		18.15	■□□□□ 0.5
DDR1-231	ENST00000417521	COL4A4	P53420	1690 aa	Predicted RBP	18.15	■□□□□ 0.5
DDR1-231	ENST00000417521	CARNS1	A5YM72	827 aa		18.14	■□□□□ 0.5
DDR1-231	ENST00000417521	TSPAN1	O60635	241 aa		18.14	■□□□□ 0.5
DDR1-231	ENST00000417521	PDIA4	P13667	645 aa	Known RBP	18.14	■□□□□ 0.5
DDR1-231	ENST00000417521	KCNA5	P22460	613 aa		18.14	■□□□□ 0.5
DDR1-231	ENST00000417521	AMHR2	Q16671	573 aa		18.14	■□□□□ 0.5
DDR1-231	ENST00000417521	LEXM	Q3ZCV2	418 aa		18.14	■□□□□ 0.5
DDR1-231	ENST00000417521	ARL6IP4	Q66PJ3	421 aa	Known RBP	18.14	■□□□□ 0.5
DDR1-231	ENST00000417521	NOTUM	Q6P988	496 aa		18.14	■□□□□ 0.5
DDR1-231	ENST00000417521	LPP	Q93052	612 aa		18.14	■□□□□ 0.5
DDR1-231	ENST00000417521	BHMT2	Q9H2M3	363 aa		18.14	■□□□□ 0.5
DDR1-231	ENST00000417521	DDX19A	Q9NUU7	478 aa	Known RBP	18.14	■□□□□ 0.5
DDR1-231	ENST00000417521	PUF60	Q9UHX1	559 aa	Known RBP	18.14	■□□□□ 0.5
DDR1-231	ENST00000417521	WDR81	Q562E7	1941 aa		18.14	■□□□□ 0.49
DDR1-231	ENST00000417521	OFD1	O75665	1012 aa		18.14	■□□□□ 0.49
DDR1-231	ENST00000417521	BRD1	O95696	1058 aa		18.14	■□□□□ 0.49
DDR1-231	ENST00000417521	F13A1	P00488	732 aa		18.14	■□□□□ 0.49
DDR1-231	ENST00000417521	IRS1	P35568	1242 aa		18.14	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms