RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 DBR1Q9UK59 544 aaKnown RBP17.38■□□□□ 0.37
ITGB1-204ENST00000417122 A0A0C4DFX4 3053 aa17.38■□□□□ 0.37
ITGB1-204ENST00000417122 LAD1O00515 517 aa17.37■□□□□ 0.37
ITGB1-204ENST00000417122 MUTP22033 750 aa17.37■□□□□ 0.37
ITGB1-204ENST00000417122 KCNA5P22460 613 aa17.37■□□□□ 0.37
ITGB1-204ENST00000417122 PTENP60484 403 aa17.37■□□□□ 0.37
ITGB1-204ENST00000417122 POU5F1BQ06416 359 aa17.37■□□□□ 0.37
ITGB1-204ENST00000417122 PDIA5Q14554 519 aa17.37■□□□□ 0.37
ITGB1-204ENST00000417122 RILPL1Q5EBL4 403 aa17.37■□□□□ 0.37
ITGB1-204ENST00000417122 THNSL1Q8IYQ7 743 aa17.37■□□□□ 0.37
ITGB1-204ENST00000417122 PABPC5Q96DU9 382 aaKnown RBP17.37■□□□□ 0.37
ITGB1-204ENST00000417122 UHRF1Q96T88 793 aaPredicted RBP17.37■□□□□ 0.37
ITGB1-204ENST00000417122 POLR3FQ9H1D9 316 aaPredicted RBP17.37■□□□□ 0.37
ITGB1-204ENST00000417122 ZNF623O75123 536 aa17.36■□□□□ 0.37
ITGB1-204ENST00000417122 FGF18O76093 207 aa17.36■□□□□ 0.37
ITGB1-204ENST00000417122 ERLIN2O94905 339 aa17.36■□□□□ 0.37
ITGB1-204ENST00000417122 GLRA2P23416 452 aa17.36■□□□□ 0.37
ITGB1-204ENST00000417122 HOXA11P31270 313 aaPredicted RBP17.36■□□□□ 0.37
ITGB1-204ENST00000417122 CCT6AP40227 531 aaKnown RBP17.36■□□□□ 0.37
ITGB1-204ENST00000417122 UBE3AQ05086 875 aa17.36■□□□□ 0.37
ITGB1-204ENST00000417122 CAPSQ13938 189 aa17.36■□□□□ 0.37
ITGB1-204ENST00000417122 PCBP1Q15365 356 aaKnown RBP eCLIP17.36■□□□□ 0.37
ITGB1-204ENST00000417122 LONRF3Q496Y0 759 aa17.36■□□□□ 0.37
ITGB1-204ENST00000417122 LARP1BQ659C4 914 aaKnown RBP17.36■□□□□ 0.37
ITGB1-204ENST00000417122 EP400NLQ6ZTU2 488 aa17.36■□□□□ 0.37
ITGB1-204ENST00000417122 MAEAQ7L5Y9 396 aa17.36■□□□□ 0.37
ITGB1-204ENST00000417122 IFNLR1Q8IU57 520 aaPredicted RBP17.36■□□□□ 0.37
ITGB1-204ENST00000417122 LPPQ93052 612 aa17.36■□□□□ 0.37
ITGB1-204ENST00000417122 MRPL9Q9BYD2 267 aaKnown RBP17.36■□□□□ 0.37
ITGB1-204ENST00000417122 RAB34Q9BZG1 259 aa17.36■□□□□ 0.37
ITGB1-204ENST00000417122 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.36■□□□□ 0.37
ITGB1-204ENST00000417122 STK24Q9Y6E0 443 aa17.36■□□□□ 0.37
ITGB1-204ENST00000417122 XIRP2A4UGR9 3374 aa17.36■□□□□ 0.37
ITGB1-204ENST00000417122 VCANP13611 3396 aa17.35■□□□□ 0.37
ITGB1-204ENST00000417122 ARHGEF35A5YM69 484 aa17.35■□□□□ 0.37
ITGB1-204ENST00000417122 INO80B-WBP1J3KQ70 363 aa17.35■□□□□ 0.37
ITGB1-204ENST00000417122 NCK2O43639 380 aa17.35■□□□□ 0.37
ITGB1-204ENST00000417122 AXLP30530 894 aa17.35■□□□□ 0.37
ITGB1-204ENST00000417122 IRS1P35568 1242 aa17.35■□□□□ 0.37
ITGB1-204ENST00000417122 PRPHP41219 470 aa17.35■□□□□ 0.37
ITGB1-204ENST00000417122 HYAL1Q12794 435 aa17.35■□□□□ 0.37
ITGB1-204ENST00000417122 COL19A1Q14993 1142 aa17.35■□□□□ 0.37
ITGB1-204ENST00000417122 ECM1Q16610 540 aa17.35■□□□□ 0.37
ITGB1-204ENST00000417122 LEXMQ3ZCV2 418 aa17.35■□□□□ 0.37
ITGB1-204ENST00000417122 KCNT2Q6UVM3 1135 aa17.35■□□□□ 0.37
ITGB1-204ENST00000417122 IGSF22Q8N9C0 903 aa17.35■□□□□ 0.37
ITGB1-204ENST00000417122 MCPH1Q8NEM0 835 aa17.35■□□□□ 0.37
ITGB1-204ENST00000417122 RSPH1Q8WYR4 309 aa17.35■□□□□ 0.37
ITGB1-204ENST00000417122 PPP2R3CQ969Q6 453 aa17.35■□□□□ 0.37
ITGB1-204ENST00000417122 PGBD4Q96DM1 585 aa17.35■□□□□ 0.37
ITGB1-204ENST00000417122 ZNF558Q96NG5 402 aa17.35■□□□□ 0.37
ITGB1-204ENST00000417122 NFKBIZQ9BYH8 718 aa17.35■□□□□ 0.37
ITGB1-204ENST00000417122 GPRC5CQ9NQ84 441 aa17.35■□□□□ 0.37
ITGB1-204ENST00000417122 CLDND1Q9NY35 253 aa17.35■□□□□ 0.37
ITGB1-204ENST00000417122 PCDHB2Q9Y5E7 798 aa17.35■□□□□ 0.37
ITGB1-204ENST00000417122 MEIS3P2A8K0S8 358 aa17.34■□□□□ 0.37
ITGB1-204ENST00000417122 TNFRSF10AO00220 468 aa17.34■□□□□ 0.37
ITGB1-204ENST00000417122 TSPAN1O60635 241 aa17.34■□□□□ 0.37
ITGB1-204ENST00000417122 PLCB3Q01970 1234 aa17.34■□□□□ 0.37
ITGB1-204ENST00000417122 MBTD1Q05BQ5 628 aa17.34■□□□□ 0.37
ITGB1-204ENST00000417122 NCBP1Q09161 790 aaKnown RBP17.34■□□□□ 0.37
ITGB1-204ENST00000417122 CUL4AQ13619 759 aa17.34■□□□□ 0.37
ITGB1-204ENST00000417122 UBXN11Q5T124 520 aa17.34■□□□□ 0.37
ITGB1-204ENST00000417122 PADI6Q6TGC4 694 aa17.34■□□□□ 0.37
ITGB1-204ENST00000417122 DTHD1Q6ZMT9 781 aa17.34■□□□□ 0.37
ITGB1-204ENST00000417122 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.34■□□□□ 0.37
ITGB1-204ENST00000417122 MICAL1Q8TDZ2 1067 aa17.34■□□□□ 0.37
ITGB1-204ENST00000417122 SNX29Q8TEQ0 813 aa17.34■□□□□ 0.37
ITGB1-204ENST00000417122 NECAB3Q96P71 396 aaPredicted RBP17.34■□□□□ 0.37
ITGB1-204ENST00000417122 IGFLR1Q9H665 355 aa17.34■□□□□ 0.37
ITGB1-204ENST00000417122 TLR9Q9NR96 1032 aa17.34■□□□□ 0.37
ITGB1-204ENST00000417122 H3BQ06 376 aaPredicted RBP17.33■□□□□ 0.36
ITGB1-204ENST00000417122 OFD1O75665 1012 aa17.33■□□□□ 0.36
ITGB1-204ENST00000417122 GTF2F1P35269 517 aaKnown RBP eCLIP17.33■□□□□ 0.361e-12■■■■■ 49.4
ITGB1-204ENST00000417122 PPM1AP35813 382 aa17.33■□□□□ 0.36
ITGB1-204ENST00000417122 PBX3P40426 434 aa17.33■□□□□ 0.36
ITGB1-204ENST00000417122 IL17AQ16552 155 aa17.33■□□□□ 0.36
ITGB1-204ENST00000417122 CTC1Q2NKJ3 1217 aa17.33■□□□□ 0.36
ITGB1-204ENST00000417122 NOMO2Q5JPE7 1267 aa17.33■□□□□ 0.36
ITGB1-204ENST00000417122 KRT79Q5XKE5 535 aa17.33■□□□□ 0.36
ITGB1-204ENST00000417122 NOTUMQ6P988 496 aa17.33■□□□□ 0.36
ITGB1-204ENST00000417122 GLB1LQ6UWU2 654 aa17.33■□□□□ 0.36
ITGB1-204ENST00000417122 MRPL10Q7Z7H8 261 aaKnown RBP17.33■□□□□ 0.36
ITGB1-204ENST00000417122 ADGRD2Q7Z7M1 963 aa17.33■□□□□ 0.36
ITGB1-204ENST00000417122 MRPS27Q92552 414 aaKnown RBP17.33■□□□□ 0.36
ITGB1-204ENST00000417122 CPB2Q96IY4 423 aa17.33■□□□□ 0.36
ITGB1-204ENST00000417122 PUF60Q9UHX1 559 aaKnown RBP17.33■□□□□ 0.36
ITGB1-204ENST00000417122 KIAA1024Q9UPX6 916 aa17.33■□□□□ 0.36
ITGB1-204ENST00000417122 LZTS1Q9Y250 596 aa17.33■□□□□ 0.36
ITGB1-204ENST00000417122 INPP5FQ9Y2H2 1132 aa17.33■□□□□ 0.36
ITGB1-204ENST00000417122 MYO7AQ13402 2215 aa17.33■□□□□ 0.36
ITGB1-204ENST00000417122 LRRIQ4A6NIV6 560 aa17.32■□□□□ 0.36
ITGB1-204ENST00000417122 PP2D1A8MPX8 630 aa17.32■□□□□ 0.36
ITGB1-204ENST00000417122 CYP11B2P19099 503 aa17.32■□□□□ 0.36
ITGB1-204ENST00000417122 LTBRP36941 435 aa17.32■□□□□ 0.36
ITGB1-204ENST00000417122 ALDH7A1P49419 539 aaKnown RBP17.32■□□□□ 0.36
ITGB1-204ENST00000417122 BCAR1P56945 870 aa17.32■□□□□ 0.36
ITGB1-204ENST00000417122 ERVFC1P60507 584 aa17.32■□□□□ 0.36
ITGB1-204ENST00000417122 ATP2C1P98194 919 aaPredicted RBP17.32■□□□□ 0.36
ITGB1-204ENST00000417122 KRT17Q04695 432 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms