RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 PRPF31Q8WWY3 499 aaKnown RBP24.38■■□□□ 1.49
ACTB-203ENST00000417101 SUSD6Q92537 303 aa24.38■■□□□ 1.49
ACTB-203ENST00000417101 TMEM143Q96AN5 459 aa24.38■■□□□ 1.49
ACTB-203ENST00000417101 RPGRIP1Q96KN7 1286 aa24.38■■□□□ 1.49
ACTB-203ENST00000417101 DHX33Q9H6R0 707 aaKnown RBP24.38■■□□□ 1.49
ACTB-203ENST00000417101 FAM105AQ9NUU6 356 aa24.38■■□□□ 1.49
ACTB-203ENST00000417101 MEIS3P2A8K0S8 358 aa24.37■■□□□ 1.49
ACTB-203ENST00000417101 ZC3H11AO75152 810 aaKnown RBP eCLIP24.37■■□□□ 1.49
ACTB-203ENST00000417101 YWHABP31946 246 aaKnown RBP24.37■■□□□ 1.49
ACTB-203ENST00000417101 KRT2P35908 639 aa24.37■■□□□ 1.49
ACTB-203ENST00000417101 RFC5P40937 340 aa24.37■■□□□ 1.49
ACTB-203ENST00000417101 SMC1AQ14683 1233 aaKnown RBP24.37■■□□□ 1.49
ACTB-203ENST00000417101 CBX2Q14781 532 aaPredicted RBP24.37■■□□□ 1.49
ACTB-203ENST00000417101 EXOC8Q8IYI6 725 aa24.37■■□□□ 1.49
ACTB-203ENST00000417101 MRPL43Q8N983 215 aaKnown RBP24.37■■□□□ 1.49
ACTB-203ENST00000417101 PSPC1Q8WXF1 523 aaKnown RBP24.37■■□□□ 1.49
ACTB-203ENST00000417101 TMEM169Q96HH4 297 aa24.37■■□□□ 1.49
ACTB-203ENST00000417101 DYDC2Q96IM9 177 aa24.37■■□□□ 1.49
ACTB-203ENST00000417101 APOL5Q9BWW9 433 aa24.37■■□□□ 1.49
ACTB-203ENST00000417101 S1PR5Q9H228 398 aa24.37■■□□□ 1.49
ACTB-203ENST00000417101 BRMS1Q9HCU9 246 aa24.37■■□□□ 1.49
ACTB-203ENST00000417101 PPP4R2Q9NY27 417 aa24.37■■□□□ 1.49
ACTB-203ENST00000417101 INPP5FQ9Y2H2 1132 aa24.37■■□□□ 1.49
ACTB-203ENST00000417101 PPME1Q9Y570 386 aa24.37■■□□□ 1.49
ACTB-203ENST00000417101 ZNF623O75123 536 aa24.36■■□□□ 1.49
ACTB-203ENST00000417101 BAG4O95429 457 aaKnown RBP24.36■■□□□ 1.49
ACTB-203ENST00000417101 LARGE1O95461 756 aa24.36■■□□□ 1.49
ACTB-203ENST00000417101 SRGAP2CP0DJJ0 459 aa24.36■■□□□ 1.49
ACTB-203ENST00000417101 CA8P35219 290 aa24.36■■□□□ 1.49
ACTB-203ENST00000417101 RAB27AP51159 221 aa24.36■■□□□ 1.49
ACTB-203ENST00000417101 CYP4A11Q02928 519 aa24.36■■□□□ 1.49
ACTB-203ENST00000417101 SPIRE1Q08AE8 756 aa24.36■■□□□ 1.49
ACTB-203ENST00000417101 CTTNQ14247 550 aaKnown RBP24.36■■□□□ 1.49
ACTB-203ENST00000417101 ME3Q16798 604 aa24.36■■□□□ 1.49
ACTB-203ENST00000417101 NOMO2Q5JPE7 1267 aa24.36■■□□□ 1.49
ACTB-203ENST00000417101 SYCE2Q6PIF2 218 aa24.36■■□□□ 1.49
ACTB-203ENST00000417101 HFE2Q6ZVN8 426 aa24.36■■□□□ 1.49
ACTB-203ENST00000417101 OTUD6AQ7L8S5 288 aa24.36■■□□□ 1.49
ACTB-203ENST00000417101 SLFN12Q8IYM2 578 aa24.36■■□□□ 1.49
ACTB-203ENST00000417101 RSPH1Q8WYR4 309 aa24.36■■□□□ 1.49
ACTB-203ENST00000417101 EDAQ92838 391 aa24.36■■□□□ 1.49
ACTB-203ENST00000417101 AGPAT5Q9NUQ2 364 aa24.36■■□□□ 1.49
ACTB-203ENST00000417101 TBC1D13Q9NVG8 400 aa24.36■■□□□ 1.49
ACTB-203ENST00000417101 WDFY4Q6ZS81 3184 aa24.36■■□□□ 1.49
ACTB-203ENST00000417101 C2orf71A6NGG8 1288 aa24.35■■□□□ 1.49
ACTB-203ENST00000417101 ZBTB39O15060 712 aa24.35■■□□□ 1.49
ACTB-203ENST00000417101 LAMTOR4Q0VGL1 99 aa24.35■■□□□ 1.49
ACTB-203ENST00000417101 XKR9Q5GH70 373 aa24.35■■□□□ 1.49
ACTB-203ENST00000417101 TMEM173Q86WV6 379 aaPredicted RBP24.35■■□□□ 1.49
ACTB-203ENST00000417101 TNFRSF25Q93038 417 aa24.35■■□□□ 1.49
ACTB-203ENST00000417101 GTF3C6Q969F1 213 aa24.35■■□□□ 1.49
ACTB-203ENST00000417101 ZSWIM4Q9H7M6 989 aa24.35■■□□□ 1.49
ACTB-203ENST00000417101 MINDY3Q9H8M7 445 aa24.35■■□□□ 1.49
ACTB-203ENST00000417101 PCDHB2Q9Y5E7 798 aa24.35■■□□□ 1.49
ACTB-203ENST00000417101 OFD1O75665 1012 aa24.34■■□□□ 1.49
ACTB-203ENST00000417101 CXCL14O95715 111 aa24.34■■□□□ 1.49
ACTB-203ENST00000417101 HOXB8P17481 243 aaPredicted RBP24.34■■□□□ 1.49
ACTB-203ENST00000417101 RNASELQ05823 741 aaKnown RBP24.34■■□□□ 1.49
ACTB-203ENST00000417101 EMC2Q15006 297 aa24.34■■□□□ 1.49
ACTB-203ENST00000417101 SRGAP1Q7Z6B7 1085 aa24.34■■□□□ 1.49
ACTB-203ENST00000417101 TPH2Q8IWU9 490 aa24.34■■□□□ 1.49
ACTB-203ENST00000417101 VPS52Q8N1B4 723 aa24.34■■□□□ 1.49
ACTB-203ENST00000417101 CASP10Q92851 521 aa24.34■■□□□ 1.49
ACTB-203ENST00000417101 PGBD4Q96DM1 585 aa24.34■■□□□ 1.49
ACTB-203ENST00000417101 GBP3Q9H0R5 595 aa24.34■■□□□ 1.49
ACTB-203ENST00000417101 NRDE2Q9H7Z3 1164 aa24.34■■□□□ 1.49
ACTB-203ENST00000417101 HCFC2Q9Y5Z7 792 aa24.34■■□□□ 1.49
ACTB-203ENST00000417101 TECTAO75443 2155 aa24.33■■□□□ 1.49
ACTB-203ENST00000417101 GAS2O43903 313 aaKnown RBP24.33■■□□□ 1.49
ACTB-203ENST00000417101 HOXD11P31277 338 aaPredicted RBP24.33■■□□□ 1.49
ACTB-203ENST00000417101 BMS1Q14692 1282 aaKnown RBP24.33■■□□□ 1.49
ACTB-203ENST00000417101 RNF149Q8NC42 400 aa24.33■■□□□ 1.49
ACTB-203ENST00000417101 NSUN7Q8NE18 718 aaKnown RBP24.33■■□□□ 1.49
ACTB-203ENST00000417101 TCP11Q8WWU5 503 aa24.33■■□□□ 1.49
ACTB-203ENST00000417101 CLASP2O75122 1294 aaKnown RBP24.32■■□□□ 1.48
ACTB-203ENST00000417101 SLITRK3O94933 977 aa24.32■■□□□ 1.48
ACTB-203ENST00000417101 GALTP07902 379 aa24.32■■□□□ 1.48
ACTB-203ENST00000417101 HOXA11P31270 313 aaPredicted RBP24.32■■□□□ 1.48
ACTB-203ENST00000417101 FOSBP53539 338 aa24.32■■□□□ 1.48
ACTB-203ENST00000417101 FERMT3Q86UX7 667 aa24.32■■□□□ 1.48
ACTB-203ENST00000417101 BCL7CQ8WUZ0 217 aaPredicted RBP24.32■■□□□ 1.48
ACTB-203ENST00000417101 AUTS2Q8WXX7 1259 aa24.32■■□□□ 1.48
ACTB-203ENST00000417101 IGSF21Q96ID5 467 aa24.32■■□□□ 1.48
ACTB-203ENST00000417101 EIF2AK1Q9BQI3 630 aaKnown RBP24.32■■□□□ 1.48
ACTB-203ENST00000417101 ZBP1Q9H171 429 aa24.32■■□□□ 1.48
ACTB-203ENST00000417101 DNAJB4Q9UDY4 337 aa24.32■■□□□ 1.48
ACTB-203ENST00000417101 PCDHA12Q9UN75 941 aa24.32■■□□□ 1.48
ACTB-203ENST00000417101 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.31■■□□□ 1.48
ACTB-203ENST00000417101 CARNS1A5YM72 827 aa24.31■■□□□ 1.48
ACTB-203ENST00000417101 BTBD18B2RXH4 712 aa24.31■■□□□ 1.48
ACTB-203ENST00000417101 ASAP2O43150 1006 aa24.31■■□□□ 1.48
ACTB-203ENST00000417101 JAK2O60674 1132 aa24.31■■□□□ 1.48
ACTB-203ENST00000417101 NEK4P51957 841 aa24.31■■□□□ 1.48
ACTB-203ENST00000417101 CALCRLQ16602 461 aa24.31■■□□□ 1.48
ACTB-203ENST00000417101 TPRNQ4KMQ1 711 aa24.31■■□□□ 1.48
ACTB-203ENST00000417101 AGMOQ6ZNB7 445 aa24.31■■□□□ 1.48
ACTB-203ENST00000417101 TRIM67Q6ZTA4 783 aa24.31■■□□□ 1.48
ACTB-203ENST00000417101 MRPL10Q7Z7H8 261 aaKnown RBP24.31■■□□□ 1.48
ACTB-203ENST00000417101 URGCPQ8TCY9 931 aa24.31■■□□□ 1.48
ACTB-203ENST00000417101 MFSD14AQ96MC6 490 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms