RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 MAPKAPK5Q8IW41 473 aa15.83■□□□□ 0.12
NCKIPSD-204ENST00000416649 PHC3Q8NDX5 983 aa15.83■□□□□ 0.12
NCKIPSD-204ENST00000416649 SH3RF3Q8TEJ3 882 aaPredicted RBP15.83■□□□□ 0.12
NCKIPSD-204ENST00000416649 TGFBRAP1Q8WUH2 860 aa15.83■□□□□ 0.12
NCKIPSD-204ENST00000416649 SEC14L1Q92503 715 aa15.83■□□□□ 0.12
NCKIPSD-204ENST00000416649 AK8Q96MA6 479 aa15.83■□□□□ 0.12
NCKIPSD-204ENST00000416649 PCMTD2Q9NV79 361 aa15.83■□□□□ 0.12
NCKIPSD-204ENST00000416649 SEPT11Q9NVA2 429 aaKnown RBP15.83■□□□□ 0.12
NCKIPSD-204ENST00000416649 SUCLA2Q9P2R7 463 aaPredicted RBP15.83■□□□□ 0.12
NCKIPSD-204ENST00000416649 POTEMA6NI47 508 aa15.83■□□□□ 0.12
NCKIPSD-204ENST00000416649 EPHB2P29323 1055 aa15.83■□□□□ 0.12
NCKIPSD-204ENST00000416649 PTENP60484 403 aa15.83■□□□□ 0.12
NCKIPSD-204ENST00000416649 POU5F1Q01860 360 aaKnown RBP15.83■□□□□ 0.12
NCKIPSD-204ENST00000416649 TCERG1LQ5VWI1 586 aa15.83■□□□□ 0.12
NCKIPSD-204ENST00000416649 ZDHHC24Q6UX98 284 aa15.83■□□□□ 0.12
NCKIPSD-204ENST00000416649 ECHDC2Q86YB7 292 aa15.83■□□□□ 0.12
NCKIPSD-204ENST00000416649 RASGEF1CQ8N431 466 aa15.83■□□□□ 0.12
NCKIPSD-204ENST00000416649 FAM13CQ8NE31 585 aa15.83■□□□□ 0.12
NCKIPSD-204ENST00000416649 KIFAP3Q92845 792 aa15.83■□□□□ 0.12
NCKIPSD-204ENST00000416649 BLOC1S4Q9NUP1 217 aa15.83■□□□□ 0.12
NCKIPSD-204ENST00000416649 RASAL2Q9UJF2 1139 aa15.83■□□□□ 0.12
NCKIPSD-204ENST00000416649 PPP1R9AQ9ULJ8 1098 aa15.83■□□□□ 0.12
NCKIPSD-204ENST00000416649 STX8Q9UNK0 236 aa15.83■□□□□ 0.12
NCKIPSD-204ENST00000416649 USP17L3A6NCW0 530 aa15.82■□□□□ 0.12
NCKIPSD-204ENST00000416649 USP17L4A6NCW7 530 aa15.82■□□□□ 0.12
NCKIPSD-204ENST00000416649 KCNH2Q12809 1159 aa15.82■□□□□ 0.12
NCKIPSD-204ENST00000416649 GRB10Q13322 594 aa15.82■□□□□ 0.12
NCKIPSD-204ENST00000416649 SETDB1Q15047 1291 aa15.82■□□□□ 0.12
NCKIPSD-204ENST00000416649 USP17L1Q7RTZ2 530 aa15.82■□□□□ 0.12
NCKIPSD-204ENST00000416649 ZC3H18Q86VM9 953 aaKnown RBP15.82■□□□□ 0.12
NCKIPSD-204ENST00000416649 SYCE1Q8N0S2 351 aa15.82■□□□□ 0.12
NCKIPSD-204ENST00000416649 RBM41Q96IZ5 413 aaKnown RBP15.82■□□□□ 0.12
NCKIPSD-204ENST00000416649 MYLK2Q9H1R3 596 aa15.82■□□□□ 0.12
NCKIPSD-204ENST00000416649 DCP1AQ9NPI6 582 aaPredicted RBP15.82■□□□□ 0.12
NCKIPSD-204ENST00000416649 TXLNGQ9NUQ3 528 aa15.82■□□□□ 0.12
NCKIPSD-204ENST00000416649 SCOCQ9UIL1 159 aa15.82■□□□□ 0.12
NCKIPSD-204ENST00000416649 GGA1Q9UJY5 639 aa15.82■□□□□ 0.12
NCKIPSD-204ENST00000416649 ABCB11O95342 1321 aa15.82■□□□□ 0.12
NCKIPSD-204ENST00000416649 GPR75-ASB3A0A0A6YYF3 556 aa15.82■□□□□ 0.12
NCKIPSD-204ENST00000416649 KIAA0391O15091 583 aaKnown RBP15.82■□□□□ 0.12
NCKIPSD-204ENST00000416649 GJB6O95452 261 aa15.82■□□□□ 0.12
NCKIPSD-204ENST00000416649 RPL21P46778 160 aaKnown RBP15.82■□□□□ 0.12
NCKIPSD-204ENST00000416649 IRF2BP2Q7Z5L9 587 aa15.82■□□□□ 0.12
NCKIPSD-204ENST00000416649 FAM81AQ8TBF8 368 aa15.82■□□□□ 0.12
NCKIPSD-204ENST00000416649 FGFBP2Q9BYJ0 223 aa15.82■□□□□ 0.12
NCKIPSD-204ENST00000416649 METTL5Q9NRN9 209 aaKnown RBP15.82■□□□□ 0.12
NCKIPSD-204ENST00000416649 ARMCX3Q9UH62 379 aaPredicted RBP15.82■□□□□ 0.12
NCKIPSD-204ENST00000416649 ASB3Q9Y575 518 aa15.82■□□□□ 0.12
NCKIPSD-204ENST00000416649 LAMB2P55268 1798 aa15.82■□□□□ 0.12
NCKIPSD-204ENST00000416649 RIPK2O43353 540 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 NAPAP54920 295 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 GTF2IP78347 998 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 DCAF17Q5H9S7 520 aaPredicted RBP15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 SLC27A3Q5K4L6 730 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 RBM17Q96I25 401 aaKnown RBP15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 PDGFDQ9GZP0 370 aaPredicted RBP15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 BRWD3Q6RI45 1802 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 TAF1LQ8IZX4 1826 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 CICQ96RK0 1608 aaPredicted RBP15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 TMEM110-MUSTN1A8MSY1 372 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 O00370 1275 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 LAD1O00515 517 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 RAD21O60216 631 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 BRAFP15056 766 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 SERPINB4P48594 390 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 APBB1IPQ7Z5R6 666 aaPredicted RBP15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 VPS36Q86VN1 386 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 UBE2OQ9C0C9 1292 aaKnown RBP15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 RIC8AQ9NPQ8 531 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 ANAPC4Q9UJX5 808 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 SCN7AQ01118 1682 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 ZBTB48P10074 688 aaPredicted RBP15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 ADRA2BP18089 450 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 MAPK7Q13164 816 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 LBRQ14739 615 aaKnown RBP15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 MFSD14BQ5SR56 506 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 DCAF12L1Q5VU92 463 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 SPTY2D1Q68D10 685 aaPredicted RBP15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 GJB7Q6PEY0 223 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 KCNK18Q7Z418 384 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 ZNF804AQ7Z570 1209 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 ANKLE1Q8NAG6 615 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 SNX29Q8TEQ0 813 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 PITPNM3Q9BZ71 974 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 CRNKL1Q9BZJ0 848 aaKnown RBP15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 GANQ9H2C0 597 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 CD209Q9NNX6 404 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 CHCHD3Q9NX63 227 aaKnown RBP15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 RPS6KL1Q9Y6S9 549 aa15.81■□□□□ 0.12
NCKIPSD-204ENST00000416649 PVALEFA0A1B0GWK0 134 aa15.8■□□□□ 0.12
NCKIPSD-204ENST00000416649 NVLO15381 856 aaKnown RBP15.8■□□□□ 0.12
NCKIPSD-204ENST00000416649 AFPP02771 609 aaKnown RBP15.8■□□□□ 0.12
NCKIPSD-204ENST00000416649 UCHL3P15374 230 aa15.8■□□□□ 0.12
NCKIPSD-204ENST00000416649 GALCP54803 685 aa15.8■□□□□ 0.12
NCKIPSD-204ENST00000416649 EN1Q05925 392 aaPredicted RBP15.8■□□□□ 0.12
NCKIPSD-204ENST00000416649 C10orf76Q5T2E6 689 aa15.8■□□□□ 0.12
NCKIPSD-204ENST00000416649 CCNJLQ8IV13 435 aa15.8■□□□□ 0.12
NCKIPSD-204ENST00000416649 KLHL23Q8NBE8 558 aa15.8■□□□□ 0.12
NCKIPSD-204ENST00000416649 MAIP1Q8WWC4 291 aa15.8■□□□□ 0.12
NCKIPSD-204ENST00000416649 ANKRD27Q96NW4 1050 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms