RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 NOSTRINQ8IVI9 506 aa4.64□□□□□ -1.67
TRAPPC13-203ENST00000415825 BCL6BQ8N143 479 aaPredicted RBP4.64□□□□□ -1.67
TRAPPC13-203ENST00000415825 UIMC1Q96RL1 719 aa4.64□□□□□ -1.67
TRAPPC13-203ENST00000415825 CELF4Q9BZC1 486 aaKnown RBP4.64□□□□□ -1.67
TRAPPC13-203ENST00000415825 TLK1Q9UKI8 766 aa4.64□□□□□ -1.67
TRAPPC13-203ENST00000415825 CLCA2Q9UQC9 943 aa4.64□□□□□ -1.67
TRAPPC13-203ENST00000415825 GRXCR1A8MXD5 290 aa4.63□□□□□ -1.67
TRAPPC13-203ENST00000415825 SPATA31D3P0C874 917 aa4.63□□□□□ -1.67
TRAPPC13-203ENST00000415825 KIR2DL3P43628 341 aa4.63□□□□□ -1.67
TRAPPC13-203ENST00000415825 SSRP1Q08945 709 aaKnown RBP4.63□□□□□ -1.67
TRAPPC13-203ENST00000415825 LONRF2Q1L5Z9 754 aa4.63□□□□□ -1.67
TRAPPC13-203ENST00000415825 METTL24Q5JXM2 366 aa4.63□□□□□ -1.67
TRAPPC13-203ENST00000415825 C1QL3Q5VWW1 255 aa4.63□□□□□ -1.67
TRAPPC13-203ENST00000415825 SPATA31D4Q6ZUB0 917 aa4.63□□□□□ -1.67
TRAPPC13-203ENST00000415825 ARHGEF19Q8IW93 802 aa4.63□□□□□ -1.67
TRAPPC13-203ENST00000415825 C2orf69Q8N8R5 385 aa4.63□□□□□ -1.67
TRAPPC13-203ENST00000415825 DLG3Q92796 817 aa4.63□□□□□ -1.67
TRAPPC13-203ENST00000415825 DUSP26Q9BV47 211 aa4.63□□□□□ -1.67
TRAPPC13-203ENST00000415825 KIAA1586Q9HCI6 787 aa4.63□□□□□ -1.67
TRAPPC13-203ENST00000415825 RNF7Q9UBF6 113 aa4.63□□□□□ -1.67
TRAPPC13-203ENST00000415825 PDPK1O15530 556 aa4.62□□□□□ -1.67
TRAPPC13-203ENST00000415825 NDUFA10O95299 355 aa4.62□□□□□ -1.67
TRAPPC13-203ENST00000415825 FNTBP49356 437 aa4.62□□□□□ -1.67
TRAPPC13-203ENST00000415825 BCAR1P56945 870 aa4.62□□□□□ -1.67
TRAPPC13-203ENST00000415825 ADAM8P78325 824 aa4.62□□□□□ -1.67
TRAPPC13-203ENST00000415825 IRF9Q00978 393 aa4.62□□□□□ -1.67
TRAPPC13-203ENST00000415825 FAM209AQ5JX71 171 aa4.62□□□□□ -1.67
TRAPPC13-203ENST00000415825 GDF7Q7Z4P5 450 aa4.62□□□□□ -1.67
TRAPPC13-203ENST00000415825 PLXDC1Q8IUK5 500 aa4.62□□□□□ -1.67
TRAPPC13-203ENST00000415825 CKAP2LQ8IYA6 745 aa4.62□□□□□ -1.67
TRAPPC13-203ENST00000415825 SLC43A3Q8NBI5 491 aa4.62□□□□□ -1.67
TRAPPC13-203ENST00000415825 PDCD2LQ9BRP1 358 aa4.62□□□□□ -1.67
TRAPPC13-203ENST00000415825 DHRS4Q9BTZ2 278 aa4.62□□□□□ -1.67
TRAPPC13-203ENST00000415825 AKIP1Q9NQ31 210 aa4.62□□□□□ -1.67
TRAPPC13-203ENST00000415825 DNAI1Q9UI46 699 aa4.62□□□□□ -1.67
TRAPPC13-203ENST00000415825 UBA6A0AVT1 1052 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC13-203ENST00000415825 MTSS1O43312 755 aa4.61□□□□□ -1.67
TRAPPC13-203ENST00000415825 LPXNO60711 386 aa4.61□□□□□ -1.67
TRAPPC13-203ENST00000415825 FSBPO95073 299 aa4.61□□□□□ -1.67
TRAPPC13-203ENST00000415825 C6orf222P0C671 652 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC13-203ENST00000415825 HSP90B1P14625 803 aaKnown RBP4.61□□□□□ -1.67
TRAPPC13-203ENST00000415825 ARHGAP44Q17R89 818 aa4.61□□□□□ -1.67
TRAPPC13-203ENST00000415825 TTC38Q5R3I4 469 aa4.61□□□□□ -1.67
TRAPPC13-203ENST00000415825 CATSPEREQ5SY80 951 aa4.61□□□□□ -1.67
TRAPPC13-203ENST00000415825 ABHD17BQ5VST6 288 aa4.61□□□□□ -1.67
TRAPPC13-203ENST00000415825 PRAMEF9Q5VWM5 478 aa4.61□□□□□ -1.67
TRAPPC13-203ENST00000415825 CC2D1AQ6P1N0 951 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC13-203ENST00000415825 BMP8AQ7Z5Y6 402 aa4.61□□□□□ -1.67
TRAPPC13-203ENST00000415825 NME9Q86XW9 330 aa4.61□□□□□ -1.67
TRAPPC13-203ENST00000415825 OR5M3Q8NGP4 307 aa4.61□□□□□ -1.67
TRAPPC13-203ENST00000415825 NKD2Q969F2 451 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC13-203ENST00000415825 NDC1Q9BTX1 674 aa4.61□□□□□ -1.67
TRAPPC13-203ENST00000415825 RNF181Q9P0P0 153 aa4.61□□□□□ -1.67
TRAPPC13-203ENST00000415825 RASSF10A6NK89 507 aa4.6□□□□□ -1.67
TRAPPC13-203ENST00000415825 TMEM200CA6NKL6 621 aa4.6□□□□□ -1.67
TRAPPC13-203ENST00000415825 PRR5-ARHGAP8B1AHC4 643 aa4.6□□□□□ -1.67
TRAPPC13-203ENST00000415825 DIRC3C9JPN6 131 aa4.6□□□□□ -1.67
TRAPPC13-203ENST00000415825 ADCY3O60266 1144 aa4.6□□□□□ -1.67
TRAPPC13-203ENST00000415825 DNAJC6O75061 913 aa4.6□□□□□ -1.67
TRAPPC13-203ENST00000415825 ABCG1P45844 678 aa4.6□□□□□ -1.67
TRAPPC13-203ENST00000415825 RGS3P49796 1198 aa4.6□□□□□ -1.67
TRAPPC13-203ENST00000415825 SEC24CP53992 1094 aa4.6□□□□□ -1.67
TRAPPC13-203ENST00000415825 MAPK7Q13164 816 aa4.6□□□□□ -1.67
TRAPPC13-203ENST00000415825 RASGRF1Q13972 1273 aa4.6□□□□□ -1.67
TRAPPC13-203ENST00000415825 VPS72Q15906 364 aa4.6□□□□□ -1.67
TRAPPC13-203ENST00000415825 CXorf67Q86X51 503 aaPredicted RBP4.6□□□□□ -1.67
TRAPPC13-203ENST00000415825 SIMC1Q8NDZ2 872 aa4.6□□□□□ -1.67
TRAPPC13-203ENST00000415825 SCARB1Q8WTV0 552 aa4.6□□□□□ -1.67
TRAPPC13-203ENST00000415825 MAML3Q96JK9 1138 aa4.6□□□□□ -1.67
TRAPPC13-203ENST00000415825 TUBGCP5Q96RT8 1024 aa4.6□□□□□ -1.67
TRAPPC13-203ENST00000415825 GMLQ99445 158 aa4.6□□□□□ -1.67
TRAPPC13-203ENST00000415825 BOCQ9BWV1 1114 aa4.6□□□□□ -1.67
TRAPPC13-203ENST00000415825 PCIF1Q9H4Z3 704 aa4.6□□□□□ -1.67
TRAPPC13-203ENST00000415825 NDOR1Q9UHB4 597 aa4.6□□□□□ -1.67
TRAPPC13-203ENST00000415825 FRMD4BQ9Y2L6 1034 aa4.6□□□□□ -1.67
TRAPPC13-203ENST00000415825 HOXA3O43365 443 aaPredicted RBP4.59□□□□□ -1.67
TRAPPC13-203ENST00000415825 NCR1O76036 304 aa4.59□□□□□ -1.67
TRAPPC13-203ENST00000415825 PRLP01236 227 aa4.59□□□□□ -1.67
TRAPPC13-203ENST00000415825 TCF3P15923 654 aa4.59□□□□□ -1.67
TRAPPC13-203ENST00000415825 HOXB6P17509 224 aaKnown RBP4.59□□□□□ -1.67
TRAPPC13-203ENST00000415825 APOBEC3AP31941 199 aaPredicted RBP4.59□□□□□ -1.67
TRAPPC13-203ENST00000415825 BMPR1AP36894 532 aa4.59□□□□□ -1.67
TRAPPC13-203ENST00000415825 ANTXR2P58335 489 aa4.59□□□□□ -1.67
TRAPPC13-203ENST00000415825 MPP3Q13368 585 aa4.59□□□□□ -1.67
TRAPPC13-203ENST00000415825 SPATC1Q76KD6 591 aa4.59□□□□□ -1.67
TRAPPC13-203ENST00000415825 RTN4RL1Q86UN2 441 aaPredicted RBP4.59□□□□□ -1.67
TRAPPC13-203ENST00000415825 TINF2Q9BSI4 451 aa4.59□□□□□ -1.67
TRAPPC13-203ENST00000415825 CCDC113Q9H0I3 377 aa4.59□□□□□ -1.67
TRAPPC13-203ENST00000415825 ZNF768Q9H5H4 540 aaKnown RBP4.59□□□□□ -1.67
TRAPPC13-203ENST00000415825 ACSS2Q9NR19 701 aa4.59□□□□□ -1.67
TRAPPC13-203ENST00000415825 PPP1R1BQ9UD71 204 aaPredicted RBP4.59□□□□□ -1.67
TRAPPC13-203ENST00000415825 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.59□□□□□ -1.67
TRAPPC13-203ENST00000415825 COQ6Q9Y2Z9 468 aa4.59□□□□□ -1.67
TRAPPC13-203ENST00000415825 MRPS23Q9Y3D9 190 aaKnown RBP4.59□□□□□ -1.67
TRAPPC13-203ENST00000415825 DIAPH1O60610 1272 aaKnown RBP4.58□□□□□ -1.68
TRAPPC13-203ENST00000415825 KRT37O76014 449 aa4.58□□□□□ -1.68
TRAPPC13-203ENST00000415825 STK10O94804 968 aaKnown RBP4.58□□□□□ -1.68
TRAPPC13-203ENST00000415825 ZFPL1O95159 310 aa4.58□□□□□ -1.68
TRAPPC13-203ENST00000415825 CYP17A1P05093 508 aa4.58□□□□□ -1.68
TRAPPC13-203ENST00000415825 WNT3AP56704 352 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms