RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 TUBP50607 506 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 CDK17Q00537 523 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 CYP27A1Q02318 531 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 GPR162Q16538 588 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 PARP6Q2NL67 630 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 ASPRV1Q53RT3 343 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 PRAMEF18Q5VWM3 479 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 OR52E8Q6IFG1 317 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 STYK1Q6J9G0 422 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 NEK8Q86SG6 692 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 FBXO11Q86XK2 927 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 KLHL7Q8IXQ5 586 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 TBCKQ8TEA7 893 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 SNX29Q8TEQ0 813 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 PRMT6Q96LA8 375 aaPredicted RBP8.41□□□□□ -1.06
SIK3-203ENST00000415541 MED15Q96RN5 788 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 RXFP1Q9HBX9 757 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 FBXL5Q9UKA1 691 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 RPL26L1Q9UNX3 145 aaKnown RBP8.41□□□□□ -1.06
SIK3-203ENST00000415541 USP17L10C9JJH3 530 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 DDX39AO00148 427 aaKnown RBP8.41□□□□□ -1.06
SIK3-203ENST00000415541 TNFAIP1Q13829 316 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 EAPPQ56P03 285 aaPredicted RBP8.41□□□□□ -1.06
SIK3-203ENST00000415541 GPATCH4Q5T3I0 446 aaKnown RBP8.41□□□□□ -1.06
SIK3-203ENST00000415541 ZC3H18Q86VM9 953 aaKnown RBP8.41□□□□□ -1.06
SIK3-203ENST00000415541 SPATA20Q8TB22 786 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 NELFBQ8WX92 580 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 CTNNBL1Q8WYA6 563 aaPredicted RBP8.41□□□□□ -1.06
SIK3-203ENST00000415541 ZNF317Q96PQ6 595 aaPredicted RBP8.41□□□□□ -1.06
SIK3-203ENST00000415541 SLX1AQ9BQ83 275 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 DCLRE1BQ9H816 532 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 ATP8A1Q9Y2Q0 1164 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 CD2APQ9Y5K6 639 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 MYH8P13535 1937 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 RNF225M0QZC1 329 aaPredicted RBP8.41□□□□□ -1.06
SIK3-203ENST00000415541 RGL2O15211 777 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 SART1O43290 800 aaKnown RBP8.41□□□□□ -1.06
SIK3-203ENST00000415541 SNX3O60493 162 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 POTEJP0CG39 1038 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 IL1R1P14778 569 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 GSTA3Q16772 222 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 PFKFB3Q16875 520 aaPredicted RBP8.41□□□□□ -1.06
SIK3-203ENST00000415541 CRY2Q49AN0 593 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 PRR16Q569H4 304 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 CABP7Q86V35 215 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 MAP7D3Q8IWC1 876 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 MDM1Q8TC05 714 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 ASAP3Q8TDY4 903 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 ATP8B4Q8TF62 1192 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.41□□□□□ -1.068e-9■■□□□ 12.2
SIK3-203ENST00000415541 LRP6O75581 1613 aa8.41□□□□□ -1.06
SIK3-203ENST00000415541 TMEM221A6NGB7 291 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 A8MUI8 341 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 PPP1R3GB7ZBB8 358 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 SUPT3HO75486 399 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 ALAS1P13196 640 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 IDO1P14902 403 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 MLH1P40692 756 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 CFAP157Q5JU67 520 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 NCCRP1Q6ZVX7 275 aaPredicted RBP8.4□□□□□ -1.06
SIK3-203ENST00000415541 SMYD4Q8IYR2 804 aaPredicted RBP8.4□□□□□ -1.06
SIK3-203ENST00000415541 ST13P4Q8IZP2 240 aaPredicted RBP8.4□□□□□ -1.06
SIK3-203ENST00000415541 NKX2-3Q8TAU0 364 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 EHMT1Q9H9B1 1298 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 MTMR4Q9NYA4 1195 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 TUBGCP4Q9UGJ1 667 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 ZNRF3Q9ULT6 936 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 PSMA7O14818 248 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 ACTN4O43707 911 aaKnown RBP8.4□□□□□ -1.06
SIK3-203ENST00000415541 MYCLP12524 364 aaPredicted RBP8.4□□□□□ -1.06
SIK3-203ENST00000415541 BMP3P12645 472 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 PTDSS1P48651 473 aaKnown RBP8.4□□□□□ -1.06
SIK3-203ENST00000415541 GRM1Q13255 1194 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 SEC23AQ15436 765 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 TMEM259Q4ZIN3 620 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 SPDYCQ5MJ68 293 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 TCERG1LQ5VWI1 586 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 GRAMD4Q6IC98 578 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 CERS5Q8N5B7 392 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 RSPH1Q8WYR4 309 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 LENG1Q96BZ8 264 aaPredicted RBP8.4□□□□□ -1.06
SIK3-203ENST00000415541 SMC6Q96SB8 1091 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 MTA3Q9BTC8 594 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 CCDC113Q9H0I3 377 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 MLXIPQ9HAP2 919 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 TMEM260Q9NX78 707 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 SMARCAL1Q9NZC9 954 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 NDUFA13Q9P0J0 144 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 TBC1D7Q9P0N9 293 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 PNMA2Q9UL42 364 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 SRPRBQ9Y5M8 271 aaKnown RBP8.4□□□□□ -1.06
SIK3-203ENST00000415541 DUSP10Q9Y6W6 482 aa8.4□□□□□ -1.06
SIK3-203ENST00000415541 hCG_2014768A0A024R1R8 64 aa8.4□□□□□ -1.07
SIK3-203ENST00000415541 TLDC2A0PJX2 215 aa8.4□□□□□ -1.07
SIK3-203ENST00000415541 USP17L15C9J2P7 530 aa8.4□□□□□ -1.07
SIK3-203ENST00000415541 USP17L13C9JLJ4 530 aa8.4□□□□□ -1.07
SIK3-203ENST00000415541 USP17L11C9JVI0 530 aa8.4□□□□□ -1.07
SIK3-203ENST00000415541 USP17L18D6R9N7 530 aa8.4□□□□□ -1.07
SIK3-203ENST00000415541 USP17L22D6RA61 530 aa8.4□□□□□ -1.07
SIK3-203ENST00000415541 USP17L17D6RBQ6 530 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms