RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 ABCD1P33897 745 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 RFC5P40937 340 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 STAT5BP51692 787 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 ADKP55263 362 aaKnown RBP7.28□□□□□ -1.24
HDAC8-211ENST00000415409 NPEPPSP55786 919 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 MARSP56192 900 aaKnown RBP7.28□□□□□ -1.24
HDAC8-211ENST00000415409 SNRPFP62306 86 aaKnown RBP7.28□□□□□ -1.24
HDAC8-211ENST00000415409 HTRA3P83110 453 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 CCZ1BP86790 482 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 CCZ1P86791 482 aaPredicted RBP7.28□□□□□ -1.24
HDAC8-211ENST00000415409 RBL2Q08999 1139 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 DMP1Q13316 513 aaPredicted RBP7.28□□□□□ -1.24
HDAC8-211ENST00000415409 MYBPC2Q14324 1141 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 NFIL3Q16649 462 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 PTPN21Q16825 1174 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 LY6KQ17RY6 165 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 CELF3Q5SZQ8 465 aaKnown RBP7.28□□□□□ -1.24
HDAC8-211ENST00000415409 RGMBQ6NW40 437 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.28□□□□□ -1.24
HDAC8-211ENST00000415409 ANO5Q75V66 913 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 ARMCX2Q7L311 632 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 TRMT1LQ7Z2T5 733 aaKnown RBP7.28□□□□□ -1.24
HDAC8-211ENST00000415409 GPR142Q7Z601 462 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 FRMD5Q7Z6J6 570 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 DPP9Q86TI2 863 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 RASAL3Q86YV0 1011 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 CCDC60Q8IWA6 550 aaPredicted RBP7.28□□□□□ -1.24
HDAC8-211ENST00000415409 EXOC8Q8IYI6 725 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 DAW1Q8N136 415 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 TC2NQ8N9U0 490 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 ZNF397Q8NF99 534 aaPredicted RBP7.28□□□□□ -1.24
HDAC8-211ENST00000415409 SCFD2Q8WU76 684 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 EEF2KMTQ96G04 330 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 IFT74Q96LB3 600 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 FGD4Q96M96 766 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 ERGIC2Q96RQ1 377 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 PTPN18Q99952 460 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 GBP3Q9H0R5 595 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 NDST4Q9H3R1 872 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 R3HDMLQ9H3Y0 253 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 ST6GALNAC4Q9H4F1 302 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 BCAS3Q9H6U6 928 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 VTA1Q9NP79 307 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 CYP26B1Q9NR63 512 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 SPTLC3Q9NUV7 552 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 ARMCX3Q9UH62 379 aaPredicted RBP7.28□□□□□ -1.24
HDAC8-211ENST00000415409 DDX41Q9UJV9 622 aaKnown RBP7.28□□□□□ -1.24
HDAC8-211ENST00000415409 EXOC7Q9UPT5 735 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 DIS3Q9Y2L1 958 aaKnown RBP7.28□□□□□ -1.24
HDAC8-211ENST00000415409 LUC7L2Q9Y383 392 aaKnown RBP7.28□□□□□ -1.24
HDAC8-211ENST00000415409 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.28□□□□□ -1.24
HDAC8-211ENST00000415409 WASF2Q9Y6W5 498 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 ATAD5Q96QE3 1844 aa7.28□□□□□ -1.24
HDAC8-211ENST00000415409 PASKQ96RG2 1323 aa7.27□□□□□ -1.24
HDAC8-211ENST00000415409 IGSF9BQ9UPX0 1349 aa7.27□□□□□ -1.24
HDAC8-211ENST00000415409 PHIPQ8WWQ0 1821 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 PCNTO95613 3336 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 IGKV6D-21A0A0A0MT36 114 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 GSTTP1A0A1W2PQM5 241 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 TMEM150BA6NC51 233 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 SLC15A5A6NIM6 579 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 CCDC169A6NNP5 214 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 ARHGAP6O43182 974 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 STBD1O95210 358 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 GYPCP04921 128 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 SNRPBP14678 240 aaKnown RBP7.27□□□□□ -1.25
HDAC8-211ENST00000415409 TRIM21P19474 475 aaKnown RBP7.27□□□□□ -1.25
HDAC8-211ENST00000415409 SCP2P22307 547 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 CASP14P31944 242 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 SSTR3P32745 418 aaPredicted RBP7.27□□□□□ -1.25
HDAC8-211ENST00000415409 HOXD13P35453 343 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 PSMC2P35998 433 aaKnown RBP7.27□□□□□ -1.25
HDAC8-211ENST00000415409 TCF7P36402 384 aaPredicted RBP7.27□□□□□ -1.25
HDAC8-211ENST00000415409 SLC26A2P50443 739 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 POLGP54098 1239 aaPredicted RBP7.27□□□□□ -1.25
HDAC8-211ENST00000415409 PEX3P56589 373 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 RTP1P59025 263 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 SREBF2Q12772 1141 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 LAMC2Q13753 1193 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 SYCP1Q15431 976 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 TAF1CQ15572 869 aaPredicted RBP7.27□□□□□ -1.25
HDAC8-211ENST00000415409 MTERF2Q49AM1 385 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 ZC2HC1CQ53FD0 456 aaPredicted RBP7.27□□□□□ -1.25
HDAC8-211ENST00000415409 MIIPQ5JXC2 388 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 DNTTIP2Q5QJE6 756 aaKnown RBP7.27□□□□□ -1.25
HDAC8-211ENST00000415409 CEP135Q66GS9 1140 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 HAUS6Q7Z4H7 955 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 SAPCD2Q86UD0 394 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 TRIM59Q8IWR1 403 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 FBXO16Q8IX29 292 aaPredicted RBP7.27□□□□□ -1.25
HDAC8-211ENST00000415409 TNS4Q8IZW8 715 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 AFAP1L1Q8TED9 768 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 SPIRE2Q8WWL2 714 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 SLC7A3Q8WY07 619 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 GLG1Q92896 1179 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 HVCN1Q96D96 273 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 SPATA33Q96N06 139 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 FIZ1Q96SL8 496 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 SH2D3AQ9BRG2 576 aa7.27□□□□□ -1.25
HDAC8-211ENST00000415409 MKNK1Q9BUB5 465 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms