RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 NOTUMQ6P988 496 aa16.18■□□□□ 0.18
LIMS1-206ENST00000414829 HACE1Q8IYU2 909 aa16.18■□□□□ 0.18
LIMS1-206ENST00000414829 IQUBQ8NA54 791 aa16.18■□□□□ 0.18
LIMS1-206ENST00000414829 LEO1Q8WVC0 666 aaPredicted RBP16.18■□□□□ 0.18
LIMS1-206ENST00000414829 PLIN2Q99541 437 aa16.18■□□□□ 0.18
LIMS1-206ENST00000414829 RUSC1Q9BVN2 902 aa16.18■□□□□ 0.18
LIMS1-206ENST00000414829 TMEM161AQ9NX61 479 aa16.18■□□□□ 0.18
LIMS1-206ENST00000414829 RWDD3Q9Y3V2 267 aa16.18■□□□□ 0.18
LIMS1-206ENST00000414829 PCDHB7Q9Y5E2 793 aa16.18■□□□□ 0.18
LIMS1-206ENST00000414829 C9IYK1 514 aa16.17■□□□□ 0.18
LIMS1-206ENST00000414829 PLS3P13797 630 aa16.17■□□□□ 0.18
LIMS1-206ENST00000414829 HTRA4P83105 476 aaPredicted RBP16.17■□□□□ 0.18
LIMS1-206ENST00000414829 AMPD3Q01432 767 aa16.17■□□□□ 0.18
LIMS1-206ENST00000414829 MBTD1Q05BQ5 628 aa16.17■□□□□ 0.18
LIMS1-206ENST00000414829 DSC3Q14574 896 aa16.17■□□□□ 0.18
LIMS1-206ENST00000414829 FAM187BQ17R55 369 aa16.17■□□□□ 0.18
LIMS1-206ENST00000414829 SPECC1Q5M775 1068 aa16.17■□□□□ 0.18
LIMS1-206ENST00000414829 PPP4R3CPQ6ZMV5 832 aa16.17■□□□□ 0.18
LIMS1-206ENST00000414829 SV2BQ7L1I2 683 aa16.17■□□□□ 0.18
LIMS1-206ENST00000414829 CNNM3Q8NE01 707 aa16.17■□□□□ 0.18
LIMS1-206ENST00000414829 SPIRE2Q8WWL2 714 aa16.17■□□□□ 0.18
LIMS1-206ENST00000414829 LRCH3Q96II8 777 aa16.17■□□□□ 0.18
LIMS1-206ENST00000414829 SAMD11Q96NU1 681 aa16.17■□□□□ 0.18
LIMS1-206ENST00000414829 BLOC1S4Q9NUP1 217 aa16.17■□□□□ 0.18
LIMS1-206ENST00000414829 COL4A6Q14031 1691 aa16.17■□□□□ 0.18
LIMS1-206ENST00000414829 LOXHD1Q8IVV2 1947 aa16.17■□□□□ 0.18
LIMS1-206ENST00000414829 SCN5AQ14524 2016 aa16.16■□□□□ 0.18
LIMS1-206ENST00000414829 WDR81Q562E7 1941 aa16.16■□□□□ 0.18
LIMS1-206ENST00000414829 A0A0U1RQF3 1178 aa16.16■□□□□ 0.18
LIMS1-206ENST00000414829 CARNS1A5YM72 827 aa16.16■□□□□ 0.18
LIMS1-206ENST00000414829 FAM13AO94988 1023 aa16.16■□□□□ 0.18
LIMS1-206ENST00000414829 EOMESO95936 686 aa16.16■□□□□ 0.18
LIMS1-206ENST00000414829 ADALQ6DHV7 355 aa16.16■□□□□ 0.18
LIMS1-206ENST00000414829 ABI1Q8IZP0 508 aa16.16■□□□□ 0.18
LIMS1-206ENST00000414829 LINC01599Q8WXQ3 324 aa16.16■□□□□ 0.18
LIMS1-206ENST00000414829 CCDC34Q96HJ3 373 aa16.16■□□□□ 0.18
LIMS1-206ENST00000414829 TNMDQ9H2S6 317 aa16.16■□□□□ 0.18
LIMS1-206ENST00000414829 PARVGQ9HBI0 331 aa16.16■□□□□ 0.18
LIMS1-206ENST00000414829 KMT5AQ9NQR1 393 aa16.16■□□□□ 0.18
LIMS1-206ENST00000414829 USP25Q9UHP3 1055 aa16.16■□□□□ 0.18
LIMS1-206ENST00000414829 PCDHA7Q9UN72 937 aa16.16■□□□□ 0.18
LIMS1-206ENST00000414829 ARID2Q68CP9 1835 aa16.16■□□□□ 0.18
LIMS1-206ENST00000414829 ADGRA3Q8IWK6 1321 aa16.16■□□□□ 0.18
LIMS1-206ENST00000414829 CNTNAP2Q9UHC6 1331 aa16.16■□□□□ 0.18
LIMS1-206ENST00000414829 CCDC169A6NNP5 214 aa16.15■□□□□ 0.18
LIMS1-206ENST00000414829 GRXCR1A8MXD5 290 aa16.15■□□□□ 0.18
LIMS1-206ENST00000414829 TSPAN1O60635 241 aa16.15■□□□□ 0.18
LIMS1-206ENST00000414829 UPP2O95045 317 aa16.15■□□□□ 0.18
LIMS1-206ENST00000414829 CA3P07451 260 aa16.15■□□□□ 0.18
LIMS1-206ENST00000414829 RABGGTBP53611 331 aa16.15■□□□□ 0.18
LIMS1-206ENST00000414829 PEX3P56589 373 aa16.15■□□□□ 0.18
LIMS1-206ENST00000414829 FAM189BP81408 668 aa16.15■□□□□ 0.18
LIMS1-206ENST00000414829 MCM6Q14566 821 aa16.15■□□□□ 0.18
LIMS1-206ENST00000414829 TMEM132AQ24JP5 1023 aa16.15■□□□□ 0.18
LIMS1-206ENST00000414829 AXDND1Q5T1B0 1012 aaPredicted RBP16.15■□□□□ 0.18
LIMS1-206ENST00000414829 RESP18Q5W5W9 173 aa16.15■□□□□ 0.18
LIMS1-206ENST00000414829 SHC4Q6S5L8 630 aa16.15■□□□□ 0.18
LIMS1-206ENST00000414829 USP49Q70CQ1 688 aa16.15■□□□□ 0.18
LIMS1-206ENST00000414829 CMTR2Q8IYT2 770 aaKnown RBP16.15■□□□□ 0.18
LIMS1-206ENST00000414829 SP7Q8TDD2 431 aaPredicted RBP16.15■□□□□ 0.18
LIMS1-206ENST00000414829 PGBD4Q96DM1 585 aa16.15■□□□□ 0.18
LIMS1-206ENST00000414829 ADPGKQ9BRR6 497 aa16.15■□□□□ 0.18
LIMS1-206ENST00000414829 TRIM6Q9C030 488 aaPredicted RBP16.15■□□□□ 0.18
LIMS1-206ENST00000414829 ZNF576Q9H609 170 aa16.15■□□□□ 0.18
LIMS1-206ENST00000414829 CHMP5Q9NZZ3 219 aa16.15■□□□□ 0.18
LIMS1-206ENST00000414829 SEL1LQ9UBV2 794 aa16.15■□□□□ 0.18
LIMS1-206ENST00000414829 GOLGA6L4A6NEF3 574 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 N4BP3O15049 544 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 MGEA5O60502 916 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 CSDE1O75534 798 aaKnown RBP16.14■□□□□ 0.17
LIMS1-206ENST00000414829 DGKIO75912 1065 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 PRKCBP05771 671 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 GAP43P17677 238 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 FGFR4P22455 802 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 CMA1P23946 247 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 PBX2P40425 430 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 NPTX2P47972 431 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 ZNF131P52739 623 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 STRN3Q13033 797 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 MAPK7Q13164 816 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 PRPF4BQ13523 1007 aaKnown RBP16.14■□□□□ 0.17
LIMS1-206ENST00000414829 DHX8Q14562 1220 aaKnown RBP16.14■□□□□ 0.17
LIMS1-206ENST00000414829 FAM117BQ6P1L5 589 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 ECHDC2Q86YB7 292 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 CEP57L1Q8IYX8 460 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 DAW1Q8N136 415 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 BSNDQ8WZ55 320 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 KCNN1Q92952 543 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 REEP2Q9BRK0 252 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 NTPCRQ9BSD7 190 aaKnown RBP16.14■□□□□ 0.17
LIMS1-206ENST00000414829 MRPL9Q9BYD2 267 aaKnown RBP16.14■□□□□ 0.17
LIMS1-206ENST00000414829 NKX2-4Q9H2Z4 354 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 FZD8Q9H461 694 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 TMEM134Q9H6X4 195 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 MINDY3Q9H8M7 445 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 UBN1Q9NPG3 1134 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 FAM105AQ9NUU6 356 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 ARHGAP28Q9P2N2 729 aa16.14■□□□□ 0.17
LIMS1-206ENST00000414829 YBX2Q9Y2T7 364 aaKnown RBP16.14■□□□□ 0.17
LIMS1-206ENST00000414829 TET1Q8NFU7 2136 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms