RNA–Protein interactions for RNA: ENST00000413755.5

SNHG17-201, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-201ENST00000413755 RSPH1Q8WYR4 309 aa16.09■□□□□ 0.17
SNHG17-201ENST00000413755 LARP6Q9BRS8 491 aaKnown RBP16.09■□□□□ 0.17
SNHG17-201ENST00000413755 INO80BQ9C086 356 aaPredicted RBP16.09■□□□□ 0.17
SNHG17-201ENST00000413755 IFT122Q9HBG6 1241 aa16.09■□□□□ 0.17
SNHG17-201ENST00000413755 MYH9P35579 1960 aaKnown RBP16.08■□□□□ 0.16
SNHG17-201ENST00000413755 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.08■□□□□ 0.16
SNHG17-201ENST00000413755 SLC37A4O43826 429 aa16.08■□□□□ 0.16
SNHG17-201ENST00000413755 B4GALT3O60512 393 aa16.08■□□□□ 0.16
SNHG17-201ENST00000413755 DEXIO95424 95 aa16.08■□□□□ 0.16
SNHG17-201ENST00000413755 BRD1O95696 1058 aa16.08■□□□□ 0.16
SNHG17-201ENST00000413755 SKIP12755 728 aa16.08■□□□□ 0.16
SNHG17-201ENST00000413755 EPCAMP16422 314 aa16.08■□□□□ 0.16
SNHG17-201ENST00000413755 POLGP54098 1239 aaPredicted RBP16.08■□□□□ 0.16
SNHG17-201ENST00000413755 PSMC5P62195 406 aa16.08■□□□□ 0.16
SNHG17-201ENST00000413755 NOMO2Q5JPE7 1267 aa16.08■□□□□ 0.16
SNHG17-201ENST00000413755 RARS2Q5T160 578 aaKnown RBP16.08■□□□□ 0.16
SNHG17-201ENST00000413755 PLA2G4FQ68DD2 849 aa16.08■□□□□ 0.16
SNHG17-201ENST00000413755 ZNF579Q8NAF0 562 aaKnown RBP16.08■□□□□ 0.16
SNHG17-201ENST00000413755 ZNF274Q96GC6 653 aaPredicted RBP16.08■□□□□ 0.16
SNHG17-201ENST00000413755 NLRP4Q96MN2 994 aa16.08■□□□□ 0.16
SNHG17-201ENST00000413755 VN1R3Q9BXE9 311 aa16.08■□□□□ 0.16
SNHG17-201ENST00000413755 SMOC2Q9H3U7 446 aa16.08■□□□□ 0.16
SNHG17-201ENST00000413755 FAM86C1Q9NVL1 165 aa16.08■□□□□ 0.16
SNHG17-201ENST00000413755 WRAP73Q9P2S5 460 aaPredicted RBP16.08■□□□□ 0.16
SNHG17-201ENST00000413755 DNAJB4Q9UDY4 337 aa16.08■□□□□ 0.16
SNHG17-201ENST00000413755 DDX25Q9UHL0 483 aaKnown RBP16.08■□□□□ 0.16
SNHG17-201ENST00000413755 SORCS3Q9UPU3 1222 aa16.08■□□□□ 0.16
SNHG17-201ENST00000413755 TRIOO75962 3097 aa16.08■□□□□ 0.16
SNHG17-201ENST00000413755 REC8O95072 547 aa16.07■□□□□ 0.16
SNHG17-201ENST00000413755 MTHFRP42898 656 aa16.07■□□□□ 0.16
SNHG17-201ENST00000413755 SLC11A1P49279 550 aa16.07■□□□□ 0.16
SNHG17-201ENST00000413755 AFF1P51825 1210 aaKnown RBP16.07■□□□□ 0.16
SNHG17-201ENST00000413755 NPEPPSP55786 919 aa16.07■□□□□ 0.16
SNHG17-201ENST00000413755 MTMR3Q13615 1198 aa16.07■□□□□ 0.16
SNHG17-201ENST00000413755 GIT2Q14161 759 aa16.07■□□□□ 0.16
SNHG17-201ENST00000413755 BMS1Q14692 1282 aaKnown RBP16.07■□□□□ 0.16
SNHG17-201ENST00000413755 NONOQ15233 471 aaKnown RBP eCLIP16.07■□□□□ 0.16
SNHG17-201ENST00000413755 INF2Q27J81 1249 aa16.07■□□□□ 0.16
SNHG17-201ENST00000413755 KIAA1841Q6NSI8 718 aa16.07■□□□□ 0.16
SNHG17-201ENST00000413755 GLB1LQ6UWU2 654 aa16.07■□□□□ 0.16
SNHG17-201ENST00000413755 AGMOQ6ZNB7 445 aa16.07■□□□□ 0.16
SNHG17-201ENST00000413755 CATSPER4Q7RTX7 472 aa16.07■□□□□ 0.16
SNHG17-201ENST00000413755 ZNF280BQ86YH2 543 aa16.07■□□□□ 0.16
SNHG17-201ENST00000413755 CYP26B1Q9NR63 512 aa16.07■□□□□ 0.16
SNHG17-201ENST00000413755 VAV3Q9UKW4 847 aa16.07■□□□□ 0.16
SNHG17-201ENST00000413755 INPP5FQ9Y2H2 1132 aa16.07■□□□□ 0.16
SNHG17-201ENST00000413755 DDHD2O94830 711 aa16.06■□□□□ 0.16
SNHG17-201ENST00000413755 ASGR2P07307 311 aa16.06■□□□□ 0.16
SNHG17-201ENST00000413755 RAB27AP51159 221 aa16.06■□□□□ 0.16
SNHG17-201ENST00000413755 PPP2R5CQ13362 524 aa16.06■□□□□ 0.16
SNHG17-201ENST00000413755 PTPN14Q15678 1187 aa16.06■□□□□ 0.16
SNHG17-201ENST00000413755 ATAT1Q5SQI0 421 aa16.06■□□□□ 0.16
SNHG17-201ENST00000413755 GALNT17Q6IS24 598 aa16.06■□□□□ 0.16
SNHG17-201ENST00000413755 MRPL10Q7Z7H8 261 aaKnown RBP16.06■□□□□ 0.16
SNHG17-201ENST00000413755 UBALD2Q8IYN6 164 aa16.06■□□□□ 0.16
SNHG17-201ENST00000413755 ZDHHC14Q8IZN3 488 aa16.06■□□□□ 0.16
SNHG17-201ENST00000413755 MINDY3Q9H8M7 445 aa16.06■□□□□ 0.16
SNHG17-201ENST00000413755 KCNMB3Q9NPA1 279 aa16.06■□□□□ 0.16
SNHG17-201ENST00000413755 AGPAT5Q9NUQ2 364 aa16.06■□□□□ 0.16
SNHG17-201ENST00000413755 DZANK1Q9NVP4 752 aa16.06■□□□□ 0.16
SNHG17-201ENST00000413755 KCNJ14Q9UNX9 436 aa16.06■□□□□ 0.16
SNHG17-201ENST00000413755 PCDHB2Q9Y5E7 798 aa16.06■□□□□ 0.16
SNHG17-201ENST00000413755 COL4A3BPQ9Y5P4 624 aa16.06■□□□□ 0.16
SNHG17-201ENST00000413755 CARNS1A5YM72 827 aa16.05■□□□□ 0.16
SNHG17-201ENST00000413755 H0Y858 1186 aa16.05■□□□□ 0.16
SNHG17-201ENST00000413755 CPLX1O14810 134 aa16.05■□□□□ 0.16
SNHG17-201ENST00000413755 LILRB3O75022 631 aa16.05■□□□□ 0.16
SNHG17-201ENST00000413755 HOXA11P31270 313 aaPredicted RBP16.05■□□□□ 0.16
SNHG17-201ENST00000413755 QARSP47897 775 aaKnown RBP16.05■□□□□ 0.16
SNHG17-201ENST00000413755 RNASELQ05823 741 aaKnown RBP16.05■□□□□ 0.16
SNHG17-201ENST00000413755 LETM2Q2VYF4 491 aa16.05■□□□□ 0.16
SNHG17-201ENST00000413755 UBXN11Q5T124 520 aa16.05■□□□□ 0.16
SNHG17-201ENST00000413755 KRT25Q7Z3Z0 450 aa16.05■□□□□ 0.16
SNHG17-201ENST00000413755 FAM177A1Q8N128 213 aaPredicted RBP16.05■□□□□ 0.16
SNHG17-201ENST00000413755 PGBD4Q96DM1 585 aa16.05■□□□□ 0.16
SNHG17-201ENST00000413755 KLHL5Q96PQ7 755 aa16.05■□□□□ 0.16
SNHG17-201ENST00000413755 JPH2Q9BR39 696 aaPredicted RBP16.05■□□□□ 0.16
SNHG17-201ENST00000413755 GBP3Q9H0R5 595 aa16.05■□□□□ 0.16
SNHG17-201ENST00000413755 DHX33Q9H6R0 707 aaKnown RBP16.05■□□□□ 0.16
SNHG17-201ENST00000413755 LIMD1Q9UGP4 676 aa16.05■□□□□ 0.16
SNHG17-201ENST00000413755 USTQ9Y2C2 406 aa16.05■□□□□ 0.16
SNHG17-201ENST00000413755 KMT2EQ8IZD2 1858 aa16.05■□□□□ 0.16
SNHG17-201ENST00000413755 EPB41L2O43491 1005 aaKnown RBP16.04■□□□□ 0.16
SNHG17-201ENST00000413755 NUBP1P53384 320 aa16.04■□□□□ 0.16
SNHG17-201ENST00000413755 STK3Q13188 491 aa16.04■□□□□ 0.16
SNHG17-201ENST00000413755 PPP4R3AQ6IN85 833 aa16.04■□□□□ 0.16
SNHG17-201ENST00000413755 TMC5Q6UXY8 1006 aa16.04■□□□□ 0.16
SNHG17-201ENST00000413755 SRGAP1Q7Z6B7 1085 aa16.04■□□□□ 0.16
SNHG17-201ENST00000413755 TMEM105Q8N8V8 129 aa16.04■□□□□ 0.16
SNHG17-201ENST00000413755 TDRD5Q8NAT2 981 aaKnown RBP16.04■□□□□ 0.16
SNHG17-201ENST00000413755 TMEM87AQ8NBN3 555 aa16.04■□□□□ 0.16
SNHG17-201ENST00000413755 PRPF31Q8WWY3 499 aaKnown RBP16.04■□□□□ 0.16
SNHG17-201ENST00000413755 HAS1Q92839 578 aa16.04■□□□□ 0.16
SNHG17-201ENST00000413755 ATOH1Q92858 354 aaPredicted RBP16.04■□□□□ 0.16
SNHG17-201ENST00000413755 TMEM143Q96AN5 459 aa16.04■□□□□ 0.16
SNHG17-201ENST00000413755 CEP170P1Q96L14 293 aa16.04■□□□□ 0.16
SNHG17-201ENST00000413755 FAM20AQ96MK3 541 aa16.04■□□□□ 0.16
SNHG17-201ENST00000413755 PHF20Q9BVI0 1012 aa16.04■□□□□ 0.16
SNHG17-201ENST00000413755 TM6SF1Q9BZW5 370 aa16.04■□□□□ 0.16
SNHG17-201ENST00000413755 DBR1Q9UK59 544 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms