RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 PHF7Q9BWX1 381 aaPredicted RBP21.52■■□□□ 1.04
CPSF7-204ENST00000413232 FAM105AQ9NUU6 356 aa21.52■■□□□ 1.04
CPSF7-204ENST00000413232 ZDBF2Q9HCK1 2354 aa21.51■■□□□ 1.03
CPSF7-204ENST00000413232 C2orf71A6NGG8 1288 aa21.51■■□□□ 1.03
CPSF7-204ENST00000413232 WNT7AO00755 349 aa21.51■■□□□ 1.03
CPSF7-204ENST00000413232 TBX3O15119 743 aa21.51■■□□□ 1.03
CPSF7-204ENST00000413232 AFF1P51825 1210 aaKnown RBP21.51■■□□□ 1.03
CPSF7-204ENST00000413232 CTTNQ14247 550 aaKnown RBP21.51■■□□□ 1.03
CPSF7-204ENST00000413232 EPHA7Q15375 998 aa21.51■■□□□ 1.03
CPSF7-204ENST00000413232 CATSPER4Q7RTX7 472 aa21.51■■□□□ 1.03
CPSF7-204ENST00000413232 C4orf19Q8IY42 314 aa21.51■■□□□ 1.03
CPSF7-204ENST00000413232 BCL7CQ8WUZ0 217 aaPredicted RBP21.51■■□□□ 1.03
CPSF7-204ENST00000413232 PRPF31Q8WWY3 499 aaKnown RBP21.51■■□□□ 1.03
CPSF7-204ENST00000413232 EDAQ92838 391 aa21.51■■□□□ 1.03
CPSF7-204ENST00000413232 DYDC2Q96IM9 177 aa21.51■■□□□ 1.03
CPSF7-204ENST00000413232 LXNQ9BS40 222 aa21.51■■□□□ 1.03
CPSF7-204ENST00000413232 INO80BQ9C086 356 aaPredicted RBP21.51■■□□□ 1.03
CPSF7-204ENST00000413232 NRDE2Q9H7Z3 1164 aa21.51■■□□□ 1.03
CPSF7-204ENST00000413232 TBC1D13Q9NVG8 400 aa21.51■■□□□ 1.03
CPSF7-204ENST00000413232 COL4A3BPQ9Y5P4 624 aa21.51■■□□□ 1.03
CPSF7-204ENST00000413232 ZNF623O75123 536 aa21.5■■□□□ 1.03
CPSF7-204ENST00000413232 ZC3H11AO75152 810 aaKnown RBP eCLIP21.5■■□□□ 1.03
CPSF7-204ENST00000413232 OFD1O75665 1012 aa21.5■■□□□ 1.03
CPSF7-204ENST00000413232 SRGAP2CP0DJJ0 459 aa21.5■■□□□ 1.03
CPSF7-204ENST00000413232 XBP1P17861 261 aa21.5■■□□□ 1.03
CPSF7-204ENST00000413232 ANAPC15P60006 121 aa21.5■■□□□ 1.03
CPSF7-204ENST00000413232 CYP4A11Q02928 519 aa21.5■■□□□ 1.03
CPSF7-204ENST00000413232 NCAPH2Q6IBW4 605 aa21.5■■□□□ 1.03
CPSF7-204ENST00000413232 AUTS2Q8WXX7 1259 aa21.5■■□□□ 1.03
CPSF7-204ENST00000413232 MRPL9Q9BYD2 267 aaKnown RBP21.5■■□□□ 1.03
CPSF7-204ENST00000413232 AGPAT5Q9NUQ2 364 aa21.5■■□□□ 1.03
CPSF7-204ENST00000413232 INPP5FQ9Y2H2 1132 aa21.5■■□□□ 1.03
CPSF7-204ENST00000413232 HCFC2Q9Y5Z7 792 aa21.5■■□□□ 1.03
CPSF7-204ENST00000413232 HOXA11P31270 313 aaPredicted RBP21.49■■□□□ 1.03
CPSF7-204ENST00000413232 YWHABP31946 246 aaKnown RBP21.49■■□□□ 1.03
CPSF7-204ENST00000413232 ALDH7A1P49419 539 aaKnown RBP21.49■■□□□ 1.03
CPSF7-204ENST00000413232 POLGP54098 1239 aaPredicted RBP21.49■■□□□ 1.03
CPSF7-204ENST00000413232 LAMTOR4Q0VGL1 99 aa21.49■■□□□ 1.03
CPSF7-204ENST00000413232 AGMOQ6ZNB7 445 aa21.49■■□□□ 1.03
CPSF7-204ENST00000413232 SLC7A3Q8WY07 619 aa21.49■■□□□ 1.03
CPSF7-204ENST00000413232 JPH2Q9BR39 696 aaPredicted RBP21.49■■□□□ 1.03
CPSF7-204ENST00000413232 DNAJB4Q9UDY4 337 aa21.49■■□□□ 1.03
CPSF7-204ENST00000413232 PIEZO1Q92508 2521 aa21.49■■□□□ 1.03
CPSF7-204ENST00000413232 JAK2O60674 1132 aa21.48■■□□□ 1.03
CPSF7-204ENST00000413232 CLASP2O75122 1294 aaKnown RBP21.48■■□□□ 1.03
CPSF7-204ENST00000413232 SLITRK3O94933 977 aa21.48■■□□□ 1.03
CPSF7-204ENST00000413232 GALTP07902 379 aa21.48■■□□□ 1.03
CPSF7-204ENST00000413232 ST3GAL1Q11201 340 aa21.48■■□□□ 1.03
CPSF7-204ENST00000413232 SMC1AQ14683 1233 aaKnown RBP21.48■■□□□ 1.03
CPSF7-204ENST00000413232 NOMO2Q5JPE7 1267 aa21.48■■□□□ 1.03
CPSF7-204ENST00000413232 UBXN11Q5T124 520 aa21.48■■□□□ 1.03
CPSF7-204ENST00000413232 ZNF280BQ86YH2 543 aa21.48■■□□□ 1.03
CPSF7-204ENST00000413232 VPS52Q8N1B4 723 aa21.48■■□□□ 1.03
CPSF7-204ENST00000413232 NSUN7Q8NE18 718 aaKnown RBP21.48■■□□□ 1.03
CPSF7-204ENST00000413232 FEZF2Q8TBJ5 459 aa21.48■■□□□ 1.03
CPSF7-204ENST00000413232 GTF3C6Q969F1 213 aa21.48■■□□□ 1.03
CPSF7-204ENST00000413232 VN1R3Q9BXE9 311 aa21.48■■□□□ 1.03
CPSF7-204ENST00000413232 XPNPEP1Q9NQW7 623 aa21.48■■□□□ 1.03
CPSF7-204ENST00000413232 PCDHB2Q9Y5E7 798 aa21.48■■□□□ 1.03
CPSF7-204ENST00000413232 TDRD15B5MCY1 1934 aaKnown RBP21.47■■□□□ 1.03
CPSF7-204ENST00000413232 FSD2A1L4K1 749 aa21.47■■□□□ 1.03
CPSF7-204ENST00000413232 BTBD18B2RXH4 712 aa21.47■■□□□ 1.03
CPSF7-204ENST00000413232 DKC1O60832 514 aaKnown RBP eCLIP21.47■■□□□ 1.03
CPSF7-204ENST00000413232 CXCL14O95715 111 aa21.47■■□□□ 1.03
CPSF7-204ENST00000413232 NEFLP07196 543 aa21.47■■□□□ 1.03
CPSF7-204ENST00000413232 SP100P23497 879 aaPredicted RBP21.47■■□□□ 1.03
CPSF7-204ENST00000413232 KRT2P35908 639 aa21.47■■□□□ 1.03
CPSF7-204ENST00000413232 FOSBP53539 338 aa21.47■■□□□ 1.03
CPSF7-204ENST00000413232 EMC2Q15006 297 aa21.47■■□□□ 1.03
CPSF7-204ENST00000413232 XKR9Q5GH70 373 aa21.47■■□□□ 1.03
CPSF7-204ENST00000413232 KANK3Q6NY19 840 aa21.47■■□□□ 1.03
CPSF7-204ENST00000413232 GLB1LQ6UWU2 654 aa21.47■■□□□ 1.03
CPSF7-204ENST00000413232 FERMT3Q86UX7 667 aa21.47■■□□□ 1.03
CPSF7-204ENST00000413232 PSPC1Q8WXF1 523 aaKnown RBP21.47■■□□□ 1.03
CPSF7-204ENST00000413232 TMEM169Q96HH4 297 aa21.47■■□□□ 1.03
CPSF7-204ENST00000413232 IGSF21Q96ID5 467 aa21.47■■□□□ 1.03
CPSF7-204ENST00000413232 ZBP1Q9H171 429 aa21.47■■□□□ 1.03
CPSF7-204ENST00000413232 A0A087WWV3 80 aa21.46■■□□□ 1.03
CPSF7-204ENST00000413232 MARCH6O60337 910 aa21.46■■□□□ 1.03
CPSF7-204ENST00000413232 DDHD2O94830 711 aa21.46■■□□□ 1.03
CPSF7-204ENST00000413232 SEC24BO95487 1268 aa21.46■■□□□ 1.03
CPSF7-204ENST00000413232 SKIP12755 728 aa21.46■■□□□ 1.03
CPSF7-204ENST00000413232 RFC5P40937 340 aa21.46■■□□□ 1.03
CPSF7-204ENST00000413232 SLC11A1P49279 550 aa21.46■■□□□ 1.03
CPSF7-204ENST00000413232 ZXDAP98168 799 aa21.46■■□□□ 1.03
CPSF7-204ENST00000413232 ANKRD1Q15327 319 aa21.46■■□□□ 1.03
CPSF7-204ENST00000413232 TRIM67Q6ZTA4 783 aa21.46■■□□□ 1.03
CPSF7-204ENST00000413232 SRGAP1Q7Z6B7 1085 aa21.46■■□□□ 1.03
CPSF7-204ENST00000413232 MRPL10Q7Z7H8 261 aaKnown RBP21.46■■□□□ 1.03
CPSF7-204ENST00000413232 TPH2Q8IWU9 490 aa21.46■■□□□ 1.03
CPSF7-204ENST00000413232 RNF149Q8NC42 400 aa21.46■■□□□ 1.03
CPSF7-204ENST00000413232 FBXL18Q96ME1 805 aa21.46■■□□□ 1.03
CPSF7-204ENST00000413232 NAP1L4Q99733 375 aaKnown RBP21.46■■□□□ 1.03
CPSF7-204ENST00000413232 EIF2AK1Q9BQI3 630 aaKnown RBP21.46■■□□□ 1.03
CPSF7-204ENST00000413232 GBP3Q9H0R5 595 aa21.46■■□□□ 1.03
CPSF7-204ENST00000413232 ZSWIM4Q9H7M6 989 aa21.46■■□□□ 1.03
CPSF7-204ENST00000413232 PPP4R2Q9NY27 417 aa21.46■■□□□ 1.03
CPSF7-204ENST00000413232 HOXB8P17481 243 aaPredicted RBP21.45■■□□□ 1.02
CPSF7-204ENST00000413232 RAB27AP51159 221 aa21.45■■□□□ 1.02
CPSF7-204ENST00000413232 DDX53Q86TM3 631 aaKnown RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms