RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 PBX3P40426 434 aa10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 TOB1P50616 345 aaPredicted RBP10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 PLCB3Q01970 1234 aa10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 ZNF543Q08ER8 600 aa10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 GNL2Q13823 731 aaKnown RBP10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 LPAL2Q16609 132 aa10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 ZNF528Q3MIS6 628 aa10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 GPATCH4Q5T3I0 446 aaKnown RBP10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 UTP14CQ5TAP6 766 aaKnown RBP10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 RBM43Q6ZSC3 357 aaKnown RBP10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 CCDC149Q6ZUS6 474 aa10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 ZNF713Q8N859 430 aaPredicted RBP10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 MRPL43Q8N983 215 aaKnown RBP10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 GPR152Q8TDT2 470 aa10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 FTHL17Q9BXU8 183 aa10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 EPC1Q9H2F5 836 aa10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 CWH43Q9H720 699 aa10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 BRMS1Q9HCU9 246 aa10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 PXMP2Q9NR77 195 aa10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 BARHL2Q9NY43 387 aa10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 VPS54Q9P1Q0 977 aa10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 IGSF9Q9P2J2 1179 aa10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 GMEB2Q9UKD1 530 aa10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 PADI3Q9ULW8 664 aa10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 PCDHA7Q9UN72 937 aa10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 LHX6Q9UPM6 363 aa10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 TELO2Q9Y4R8 837 aa10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 PCDHB7Q9Y5E2 793 aa10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 PCDHGA2Q9Y5H1 932 aa10.71□□□□□ -0.69
SOX9-AS1-201ENST00000412640 FAM237AA0A1B0GTK4 181 aa10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 hCG_1642624A0A1W2PR95 340 aa10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 M0R2N6 131 aa10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 NOP56O00567 594 aaKnown RBP10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 GDF9O60383 454 aa10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 EPCAMP16422 314 aa10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 TRAPPC10P48553 1259 aa10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 RING1Q06587 406 aa10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 NR5A1Q13285 461 aa10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 SMC1AQ14683 1233 aaKnown RBP10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 STK38Q15208 465 aa10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 SF3A1Q15459 793 aaKnown RBP10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 AXDND1Q5T1B0 1012 aaPredicted RBP10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 RSPH3Q86UC2 560 aa10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 SLC44A3Q8N4M1 653 aa10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 ZBTB44Q8NCP5 570 aa10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 ENGASEQ8NFI3 743 aa10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 CCDC148Q8NFR7 591 aa10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 PJA1Q8NG27 643 aa10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 OXER1Q8TDS5 423 aa10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 ZBTB10Q96DT7 871 aa10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 BORCS6Q96GS4 357 aa10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 GPR20Q99678 358 aa10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 CPVLQ9H3G5 476 aa10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 FBXO4Q9UKT5 387 aa10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 NBEAQ8NFP9 2946 aa10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 CEP295Q9C0D2 2601 aa10.7□□□□□ -0.7
SOX9-AS1-201ENST00000412640 NRCAMQ92823 1304 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 ESYT2A0FGR8 921 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 SYCE3A1L190 88 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 N4BP1O75113 896 aaKnown RBP10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 BMP15O95972 392 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 SRFP11831 508 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 LAG3P18627 525 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 CMA1P23946 247 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 ME1P48163 572 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 SARSP49591 514 aaKnown RBP10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 MRPS6P82932 125 aaKnown RBP10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 CEBPZQ03701 1054 aaKnown RBP10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 FAM160A1Q05DH4 1040 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 TMEM62Q0P6H9 643 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 SNW1Q13573 536 aaKnown RBP10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 WWC2Q6AWC2 1192 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 TAF2Q6P1X5 1199 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 KCNV1Q6PIU1 500 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 DCLRE1AQ6PJP8 1040 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 TSSK4Q6SA08 328 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 UNQ6494/PRO21346Q6UXR6 183 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 CCDC12Q8WUD4 166 aaPredicted RBP10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 MTMR8Q96EF0 704 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 RRP36Q96EU6 259 aaKnown RBP10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 FUCA2Q9BTY2 467 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 ZMYND12Q9H0C1 365 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 TMX1Q9H3N1 280 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 CLSTN2Q9H4D0 955 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 GRPEL1Q9HAV7 217 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 ARHGEF3Q9NR81 526 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 DZANK1Q9NVP4 752 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 ZSCAN32Q9NX65 697 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 DACT1Q9NYF0 836 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 PCDHA4Q9UN74 947 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 FNDC1Q4ZHG4 1894 aaPredicted RBP10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 DENND4AQ7Z401 1863 aa10.69□□□□□ -0.7
SOX9-AS1-201ENST00000412640 ASH1LQ9NR48 2969 aaKnown RBP10.68□□□□□ -0.7
SOX9-AS1-201ENST00000412640 TBC1D4O60343 1298 aa10.68□□□□□ -0.7
SOX9-AS1-201ENST00000412640 MGEA5O60502 916 aa10.68□□□□□ -0.7
SOX9-AS1-201ENST00000412640 LILRB5O75023 590 aa10.68□□□□□ -0.7
SOX9-AS1-201ENST00000412640 NR1I2O75469 434 aa10.68□□□□□ -0.7
SOX9-AS1-201ENST00000412640 CXCL14O95715 111 aa10.68□□□□□ -0.7
SOX9-AS1-201ENST00000412640 CFBP00751 764 aa10.68□□□□□ -0.7
SOX9-AS1-201ENST00000412640 GOLGA8HP0CJ92 632 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms