RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 DYNC1LI2O43237 492 aaPredicted RBP12.03□□□□□ -0.48
PTPRF-204ENST00000412568 FMO5P49326 533 aa12.03□□□□□ -0.48
PTPRF-204ENST00000412568 ZBTB16Q05516 673 aa12.03□□□□□ -0.48
PTPRF-204ENST00000412568 GIT2Q14161 759 aa12.03□□□□□ -0.48
PTPRF-204ENST00000412568 MAP1SQ66K74 1059 aaPredicted RBP12.03□□□□□ -0.48
PTPRF-204ENST00000412568 SLFN12LQ6IEE8 588 aa12.03□□□□□ -0.48
PTPRF-204ENST00000412568 FRMD5Q7Z6J6 570 aa12.03□□□□□ -0.48
PTPRF-204ENST00000412568 OSBPL9Q96SU4 736 aa12.03□□□□□ -0.48
PTPRF-204ENST00000412568 PPP1R9AQ9ULJ8 1098 aa12.03□□□□□ -0.48
PTPRF-204ENST00000412568 MAGED2Q9UNF1 606 aaPredicted RBP12.03□□□□□ -0.48
PTPRF-204ENST00000412568 ANO9A1A5B4 782 aa12.02□□□□□ -0.48
PTPRF-204ENST00000412568 RGL2O15211 777 aa12.02□□□□□ -0.48
PTPRF-204ENST00000412568 FDX1P10109 184 aa12.02□□□□□ -0.48
PTPRF-204ENST00000412568 ARL1P40616 181 aaPredicted RBP12.02□□□□□ -0.48
PTPRF-204ENST00000412568 SEMA3FQ13275 785 aa12.02□□□□□ -0.48
PTPRF-204ENST00000412568 XKR3Q5GH77 459 aa12.02□□□□□ -0.48
PTPRF-204ENST00000412568 SPOUT1Q5T280 376 aaKnown RBP12.02□□□□□ -0.48
PTPRF-204ENST00000412568 CDKAL1Q5VV42 579 aa12.02□□□□□ -0.48
PTPRF-204ENST00000412568 PNMA8AQ86V59 439 aaPredicted RBP12.02□□□□□ -0.48
PTPRF-204ENST00000412568 OR6B3Q8NGW1 331 aa12.02□□□□□ -0.48
PTPRF-204ENST00000412568 SYTL5Q8TDW5 730 aaPredicted RBP12.02□□□□□ -0.48
PTPRF-204ENST00000412568 RIT2Q99578 217 aa12.02□□□□□ -0.48
PTPRF-204ENST00000412568 CBWD1Q9BRT8 395 aa12.02□□□□□ -0.48
PTPRF-204ENST00000412568 NACA2Q9H009 215 aa12.02□□□□□ -0.48
PTPRF-204ENST00000412568 PLCB1Q9NQ66 1216 aa12.02□□□□□ -0.48
PTPRF-204ENST00000412568 BLOC1S4Q9NUP1 217 aa12.02□□□□□ -0.48
PTPRF-204ENST00000412568 MKRN1Q9UHC7 482 aaKnown RBP12.02□□□□□ -0.48
PTPRF-204ENST00000412568 EVI5O60447 810 aa12.02□□□□□ -0.49
PTPRF-204ENST00000412568 MDM2Q00987 491 aaPredicted RBP12.02□□□□□ -0.49
PTPRF-204ENST00000412568 KCNA1Q09470 495 aa12.02□□□□□ -0.49
PTPRF-204ENST00000412568 SNRNP35Q16560 246 aaKnown RBP12.02□□□□□ -0.49
PTPRF-204ENST00000412568 HADHQ16836 314 aaKnown RBP12.02□□□□□ -0.49
PTPRF-204ENST00000412568 ZNF667Q5HYK9 610 aa12.02□□□□□ -0.49
PTPRF-204ENST00000412568 NOA1Q8NC60 698 aaKnown RBP12.02□□□□□ -0.49
PTPRF-204ENST00000412568 SCFD1Q8WVM8 642 aa12.02□□□□□ -0.49
PTPRF-204ENST00000412568 CABS1Q96KC9 395 aa12.02□□□□□ -0.49
PTPRF-204ENST00000412568 ZWILCHQ9H900 591 aa12.02□□□□□ -0.49
PTPRF-204ENST00000412568 NKIRAS1Q9NYS0 192 aa12.02□□□□□ -0.49
PTPRF-204ENST00000412568 EHD2Q9NZN4 543 aa12.02□□□□□ -0.49
PTPRF-204ENST00000412568 DGAT1O75907 488 aa12.02□□□□□ -0.49
PTPRF-204ENST00000412568 CYP2B6P20813 491 aa12.02□□□□□ -0.49
PTPRF-204ENST00000412568 MTMR3Q13615 1198 aa12.02□□□□□ -0.49
PTPRF-204ENST00000412568 C2CD6Q53TS8 623 aa12.02□□□□□ -0.49
PTPRF-204ENST00000412568 MUM1L1Q5H9M0 696 aa12.02□□□□□ -0.49
PTPRF-204ENST00000412568 LRRN4CLQ8ND94 238 aa12.02□□□□□ -0.49
PTPRF-204ENST00000412568 FBXL13Q8NEE6 735 aa12.02□□□□□ -0.49
PTPRF-204ENST00000412568 SEPT1Q8WYJ6 367 aa12.02□□□□□ -0.49
PTPRF-204ENST00000412568 BEGAINQ9BUH8 593 aa12.02□□□□□ -0.49
PTPRF-204ENST00000412568 NGRNQ9NPE2 291 aaKnown RBP12.02□□□□□ -0.49
PTPRF-204ENST00000412568 SEPT10Q9P0V9 454 aa12.02□□□□□ -0.49
PTPRF-204ENST00000412568 STIM2Q9P246 746 aa12.02□□□□□ -0.49
PTPRF-204ENST00000412568 SNX24Q9Y343 169 aa12.02□□□□□ -0.49
PTPRF-204ENST00000412568 YDJCA8MPS7 323 aa12.01□□□□□ -0.49
PTPRF-204ENST00000412568 RGS16O15492 202 aaPredicted RBP12.01□□□□□ -0.49
PTPRF-204ENST00000412568 TFRCP02786 760 aaKnown RBP12.01□□□□□ -0.49
PTPRF-204ENST00000412568 ATP2A2P16615 1042 aaKnown RBP12.01□□□□□ -0.49
PTPRF-204ENST00000412568 ACTR2P61160 394 aa12.01□□□□□ -0.49
PTPRF-204ENST00000412568 C15orf52Q6ZUT6 534 aaKnown RBP12.01□□□□□ -0.49
PTPRF-204ENST00000412568 MOB2Q70IA6 237 aa12.01□□□□□ -0.49
PTPRF-204ENST00000412568 GMCL1P1Q8NEA9 526 aa12.01□□□□□ -0.49
PTPRF-204ENST00000412568 RNF25Q96BH1 459 aaPredicted RBP12.01□□□□□ -0.49
PTPRF-204ENST00000412568 POP1Q99575 1024 aaKnown RBP12.01□□□□□ -0.49
PTPRF-204ENST00000412568 MOV10L1Q9BXT6 1211 aaKnown RBP12.01□□□□□ -0.49
PTPRF-204ENST00000412568 RNF14Q9UBS8 474 aa12.01□□□□□ -0.49
PTPRF-204ENST00000412568 INPP5FQ9Y2H2 1132 aa12.01□□□□□ -0.49
PTPRF-204ENST00000412568 GOLGA8KD6RF30 607 aa12.01□□□□□ -0.49
PTPRF-204ENST00000412568 H7C0C1 242 aa12.01□□□□□ -0.49
PTPRF-204ENST00000412568 ATMINO43313 823 aaPredicted RBP12.01□□□□□ -0.49
PTPRF-204ENST00000412568 PLS3P13797 630 aa12.01□□□□□ -0.49
PTPRF-204ENST00000412568 ATP5OP48047 213 aa12.01□□□□□ -0.49
PTPRF-204ENST00000412568 CNTN2Q02246 1040 aa12.01□□□□□ -0.49
PTPRF-204ENST00000412568 DHX9Q08211 1270 aaKnown RBP12.01□□□□□ -0.49
PTPRF-204ENST00000412568 KIF22Q14807 665 aa12.01□□□□□ -0.49
PTPRF-204ENST00000412568 ZNF699Q32M78 642 aa12.01□□□□□ -0.49
PTPRF-204ENST00000412568 PDCD2LQ9BRP1 358 aa12.01□□□□□ -0.49
PTPRF-204ENST00000412568 LACRTQ9GZZ8 138 aa12.01□□□□□ -0.49
PTPRF-204ENST00000412568 SAMD15Q9P1V8 674 aa12.01□□□□□ -0.49
PTPRF-204ENST00000412568 CD2APQ9Y5K6 639 aa12.01□□□□□ -0.49
PTPRF-204ENST00000412568 AKAP3O75969 853 aa12.01□□□□□ -0.49
PTPRF-204ENST00000412568 HOXA7P31268 230 aaPredicted RBP12.01□□□□□ -0.49
PTPRF-204ENST00000412568 IFNAR2P48551 515 aa12.01□□□□□ -0.49
PTPRF-204ENST00000412568 CCT5P48643 541 aa12.01□□□□□ -0.49
PTPRF-204ENST00000412568 HNRNPH2P55795 449 aaKnown RBP12.01□□□□□ -0.49
PTPRF-204ENST00000412568 TWF2Q6IBS0 349 aaKnown RBP12.01□□□□□ -0.49
PTPRF-204ENST00000412568 FASTKD5Q7L8L6 764 aaKnown RBP12.01□□□□□ -0.49
PTPRF-204ENST00000412568 HACE1Q8IYU2 909 aa12.01□□□□□ -0.49
PTPRF-204ENST00000412568 NME8Q8N427 588 aa12.01□□□□□ -0.49
PTPRF-204ENST00000412568 FEZ2Q9UHY8 353 aaPredicted RBP12.01□□□□□ -0.49
PTPRF-204ENST00000412568 CCL15-CCL14A0A0B4J2E2 113 aa12□□□□□ -0.49
PTPRF-204ENST00000412568 A0A1B0GUA9 196 aa12□□□□□ -0.49
PTPRF-204ENST00000412568 ANKRD65E5RJM6 399 aa12□□□□□ -0.49
PTPRF-204ENST00000412568 SGK1O00141 431 aa12□□□□□ -0.49
PTPRF-204ENST00000412568 KRT1P04264 644 aa12□□□□□ -0.49
PTPRF-204ENST00000412568 SOX5P35711 763 aa12□□□□□ -0.49
PTPRF-204ENST00000412568 ARPP19P56211 112 aa12□□□□□ -0.49
PTPRF-204ENST00000412568 CCL15Q16663 113 aa12□□□□□ -0.49
PTPRF-204ENST00000412568 NT5DC1Q5TFE4 455 aa12□□□□□ -0.49
PTPRF-204ENST00000412568 FAM83AQ86UY5 434 aa12□□□□□ -0.49
PTPRF-204ENST00000412568 ERICH1Q86X53 443 aa12□□□□□ -0.49
PTPRF-204ENST00000412568 CBWD2Q8IUF1 395 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms