RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 UPP2O95045 317 aa14.58□□□□□ -0.08
HDAC8-210ENST00000412342 LINC00271P0C7V0 271 aa14.58□□□□□ -0.08
HDAC8-210ENST00000412342 ATF7P17544 494 aaPredicted RBP14.58□□□□□ -0.08
HDAC8-210ENST00000412342 NAMPTP43490 491 aa14.58□□□□□ -0.08
HDAC8-210ENST00000412342 TAP1Q03518 808 aa14.58□□□□□ -0.08
HDAC8-210ENST00000412342 PCBP1Q15365 356 aaKnown RBP eCLIP14.58□□□□□ -0.08
HDAC8-210ENST00000412342 ZNF697Q5TEC3 545 aa14.58□□□□□ -0.08
HDAC8-210ENST00000412342 CATSPER4Q7RTX7 472 aa14.58□□□□□ -0.08
HDAC8-210ENST00000412342 ZNF598Q86UK7 904 aaKnown RBP14.58□□□□□ -0.08
HDAC8-210ENST00000412342 LEO1Q8WVC0 666 aaPredicted RBP14.58□□□□□ -0.08
HDAC8-210ENST00000412342 LARP4BQ92615 738 aaKnown RBP14.58□□□□□ -0.08
HDAC8-210ENST00000412342 TIPINQ9BVW5 301 aa14.58□□□□□ -0.08
HDAC8-210ENST00000412342 CCDC113Q9H0I3 377 aa14.58□□□□□ -0.08
HDAC8-210ENST00000412342 SEMA6BQ9H3T3 888 aa14.58□□□□□ -0.08
HDAC8-210ENST00000412342 ZNF576Q9H609 170 aa14.58□□□□□ -0.08
HDAC8-210ENST00000412342 RNF19AQ9NV58 838 aa14.58□□□□□ -0.08
HDAC8-210ENST00000412342 KCND2Q9NZV8 630 aa14.58□□□□□ -0.08
HDAC8-210ENST00000412342 INSL6Q9Y581 213 aa14.58□□□□□ -0.08
HDAC8-210ENST00000412342 NPHP3-ACAD11A0A0J9YXS1 232 aa14.57□□□□□ -0.08
HDAC8-210ENST00000412342 LINC01553A4QN01 128 aa14.57□□□□□ -0.08
HDAC8-210ENST00000412342 LRRIQ4A6NIV6 560 aa14.57□□□□□ -0.08
HDAC8-210ENST00000412342 EDN1P05305 212 aa14.57□□□□□ -0.08
HDAC8-210ENST00000412342 SSBP05455 408 aaKnown RBP eCLIP14.57□□□□□ -0.08
HDAC8-210ENST00000412342 KRT85P78386 507 aa14.57□□□□□ -0.08
HDAC8-210ENST00000412342 NUCB2P80303 420 aa14.57□□□□□ -0.08
HDAC8-210ENST00000412342 MCM6Q14566 821 aa14.57□□□□□ -0.08
HDAC8-210ENST00000412342 E2F4Q16254 413 aa14.57□□□□□ -0.08
HDAC8-210ENST00000412342 UBXN11Q5T124 520 aa14.57□□□□□ -0.08
HDAC8-210ENST00000412342 PPP2R2DQ66LE6 453 aa14.57□□□□□ -0.08
HDAC8-210ENST00000412342 PPP4R3CPQ6ZMV5 832 aa14.57□□□□□ -0.08
HDAC8-210ENST00000412342 DEFB123Q8N688 67 aa14.57□□□□□ -0.08
HDAC8-210ENST00000412342 GUCD1Q96NT3 240 aa14.57□□□□□ -0.08
HDAC8-210ENST00000412342 ZBED2Q9BTP6 218 aa14.57□□□□□ -0.08
HDAC8-210ENST00000412342 KIFC3Q9BVG8 833 aa14.57□□□□□ -0.08
HDAC8-210ENST00000412342 FZD8Q9H461 694 aa14.57□□□□□ -0.08
HDAC8-210ENST00000412342 ELAC1Q9H777 363 aaKnown RBP14.57□□□□□ -0.08
HDAC8-210ENST00000412342 TMEM161AQ9NX61 479 aa14.57□□□□□ -0.08
HDAC8-210ENST00000412342 MTMR10Q9NXD2 777 aa14.57□□□□□ -0.08
HDAC8-210ENST00000412342 STK17AQ9UEE5 414 aa14.57□□□□□ -0.08
HDAC8-210ENST00000412342 CCDC39Q9UFE4 941 aa14.57□□□□□ -0.08
HDAC8-210ENST00000412342 PIN4Q9Y237 131 aaKnown RBP14.57□□□□□ -0.08
HDAC8-210ENST00000412342 A0A0U1RQF3 1178 aa14.56□□□□□ -0.08
HDAC8-210ENST00000412342 TTLL13PA6NNM8 815 aa14.56□□□□□ -0.08
HDAC8-210ENST00000412342 INO80B-WBP1J3KQ70 363 aa14.56□□□□□ -0.08
HDAC8-210ENST00000412342 B4GALT5O43286 388 aa14.56□□□□□ -0.08
HDAC8-210ENST00000412342 ZSCAN20P17040 1043 aaPredicted RBP14.56□□□□□ -0.08
HDAC8-210ENST00000412342 TXLNAP40222 546 aa14.56□□□□□ -0.08
HDAC8-210ENST00000412342 NPTX2P47972 431 aa14.56□□□□□ -0.08
HDAC8-210ENST00000412342 GATMP50440 423 aa14.56□□□□□ -0.08
HDAC8-210ENST00000412342 RAD51AP2Q09MP3 1159 aa14.56□□□□□ -0.08
HDAC8-210ENST00000412342 GRIN2CQ14957 1233 aa14.56□□□□□ -0.08
HDAC8-210ENST00000412342 PPP2R5AQ15172 486 aa14.56□□□□□ -0.08
HDAC8-210ENST00000412342 FAM187BQ17R55 369 aa14.56□□□□□ -0.08
HDAC8-210ENST00000412342 RESP18Q5W5W9 173 aa14.56□□□□□ -0.08
HDAC8-210ENST00000412342 GPBP1Q86WP2 473 aa14.56□□□□□ -0.08
HDAC8-210ENST00000412342 ECHDC2Q86YB7 292 aa14.56□□□□□ -0.08
HDAC8-210ENST00000412342 RASSF8Q8NHQ8 419 aa14.56□□□□□ -0.08
HDAC8-210ENST00000412342 DRC1Q96MC2 740 aa14.56□□□□□ -0.08
HDAC8-210ENST00000412342 YME1L1Q96TA2 773 aa14.56□□□□□ -0.08
HDAC8-210ENST00000412342 REEP2Q9BRK0 252 aa14.56□□□□□ -0.08
HDAC8-210ENST00000412342 SLC28A3Q9HAS3 691 aa14.56□□□□□ -0.08
HDAC8-210ENST00000412342 ARHGAP28Q9P2N2 729 aa14.56□□□□□ -0.08
HDAC8-210ENST00000412342 SFI1A8K8P3 1242 aa14.55□□□□□ -0.08
HDAC8-210ENST00000412342 ZNF623O75123 536 aa14.55□□□□□ -0.08
HDAC8-210ENST00000412342 STAG3L1P0CL83 205 aa14.55□□□□□ -0.08
HDAC8-210ENST00000412342 ARF4P18085 180 aaPredicted RBP14.55□□□□□ -0.08
HDAC8-210ENST00000412342 ME1P48163 572 aa14.55□□□□□ -0.08
HDAC8-210ENST00000412342 ZNF131P52739 623 aa14.55□□□□□ -0.08
HDAC8-210ENST00000412342 PEX3P56589 373 aa14.55□□□□□ -0.08
HDAC8-210ENST00000412342 CACNB1Q02641 598 aaPredicted RBP14.55□□□□□ -0.08
HDAC8-210ENST00000412342 GIT2Q14161 759 aa14.55□□□□□ -0.08
HDAC8-210ENST00000412342 DHX8Q14562 1220 aaKnown RBP14.55□□□□□ -0.08
HDAC8-210ENST00000412342 RRAGBQ5VZM2 374 aa14.55□□□□□ -0.08
HDAC8-210ENST00000412342 CCDC73Q6ZRK6 1079 aa14.55□□□□□ -0.08
HDAC8-210ENST00000412342 TAS1R3Q7RTX0 852 aa14.55□□□□□ -0.08
HDAC8-210ENST00000412342 KCNN1Q92952 543 aa14.55□□□□□ -0.08
HDAC8-210ENST00000412342 IFT74Q96LB3 600 aa14.55□□□□□ -0.08
HDAC8-210ENST00000412342 PRIMPOLQ96LW4 560 aa14.55□□□□□ -0.08
HDAC8-210ENST00000412342 FAM161BQ96MY7 647 aa14.55□□□□□ -0.08
HDAC8-210ENST00000412342 NTPCRQ9BSD7 190 aaKnown RBP14.55□□□□□ -0.08
HDAC8-210ENST00000412342 C2orf40Q9H1Z8 148 aa14.55□□□□□ -0.08
HDAC8-210ENST00000412342 C17orf75Q9HAS0 396 aa14.55□□□□□ -0.08
HDAC8-210ENST00000412342 FAM105AQ9NUU6 356 aa14.55□□□□□ -0.08
HDAC8-210ENST00000412342 DACT1Q9NYF0 836 aa14.55□□□□□ -0.08
HDAC8-210ENST00000412342 ODF2LQ9ULJ1 636 aa14.55□□□□□ -0.08
HDAC8-210ENST00000412342 ATP6V1DQ9Y5K8 247 aa14.55□□□□□ -0.08
HDAC8-210ENST00000412342 CNTNAP2Q9UHC6 1331 aa14.55□□□□□ -0.08
HDAC8-210ENST00000412342 TRANK1O15050 2925 aa14.54□□□□□ -0.08
HDAC8-210ENST00000412342 EPOPA6NHQ4 379 aa14.54□□□□□ -0.08
HDAC8-210ENST00000412342 ERLIN2O94905 339 aa14.54□□□□□ -0.08
HDAC8-210ENST00000412342 PLS3P13797 630 aa14.54□□□□□ -0.08
HDAC8-210ENST00000412342 AXLP30530 894 aa14.54□□□□□ -0.08
HDAC8-210ENST00000412342 ERVK-21P61565 698 aa14.54□□□□□ -0.08
HDAC8-210ENST00000412342 TWF2Q6IBS0 349 aaKnown RBP14.54□□□□□ -0.08
HDAC8-210ENST00000412342 ZBTB8OSQ8IWT0 167 aa14.54□□□□□ -0.08
HDAC8-210ENST00000412342 CMTR2Q8IYT2 770 aaKnown RBP14.54□□□□□ -0.08
HDAC8-210ENST00000412342 PDILTQ8N807 584 aa14.54□□□□□ -0.08
HDAC8-210ENST00000412342 DEPTORQ8TB45 409 aa14.54□□□□□ -0.08
HDAC8-210ENST00000412342 SPIRE2Q8WWL2 714 aa14.54□□□□□ -0.08
HDAC8-210ENST00000412342 CCDC51Q96ER9 411 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms