RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 COL4A4P53420 1690 aaPredicted RBP18.09■□□□□ 0.49
NOD1-202ENST00000411552 A0A0U1RQF3 1178 aa18.08■□□□□ 0.48
NOD1-202ENST00000411552 INO80B-WBP1J3KQ70 363 aa18.08■□□□□ 0.48
NOD1-202ENST00000411552 HOXA11P31270 313 aaPredicted RBP18.08■□□□□ 0.48
NOD1-202ENST00000411552 BECN1Q14457 450 aa18.08■□□□□ 0.48
NOD1-202ENST00000411552 KARSQ15046 597 aaKnown RBP18.08■□□□□ 0.48
NOD1-202ENST00000411552 FOXD4L6Q3SYB3 417 aaPredicted RBP18.08■□□□□ 0.48
NOD1-202ENST00000411552 PAN2Q504Q3 1202 aaKnown RBP18.08■□□□□ 0.48
NOD1-202ENST00000411552 RINT1Q6NUQ1 792 aa18.08■□□□□ 0.48
NOD1-202ENST00000411552 FOXD4L3Q6VB84 417 aaPredicted RBP18.08■□□□□ 0.48
NOD1-202ENST00000411552 C1orf186Q6ZWK4 172 aa18.08■□□□□ 0.48
NOD1-202ENST00000411552 USP49Q70CQ1 688 aa18.08■□□□□ 0.48
NOD1-202ENST00000411552 CMTR2Q8IYT2 770 aaKnown RBP18.08■□□□□ 0.48
NOD1-202ENST00000411552 LRRC15Q8TF66 581 aa18.08■□□□□ 0.48
NOD1-202ENST00000411552 KIFAP3Q92845 792 aa18.08■□□□□ 0.48
NOD1-202ENST00000411552 CALML4Q96GE6 196 aa18.08■□□□□ 0.48
NOD1-202ENST00000411552 EPSTI1Q96J88 318 aa18.08■□□□□ 0.48
NOD1-202ENST00000411552 TRAIPQ9BWF2 469 aa18.08■□□□□ 0.48
NOD1-202ENST00000411552 KIAA1671Q9BY89 1806 aa18.07■□□□□ 0.48
NOD1-202ENST00000411552 TSPAN1O60635 241 aa18.07■□□□□ 0.48
NOD1-202ENST00000411552 ERLIN2O94905 339 aa18.07■□□□□ 0.48
NOD1-202ENST00000411552 SSBP05455 408 aaKnown RBP eCLIP18.07■□□□□ 0.48
NOD1-202ENST00000411552 LINC00271P0C7V0 271 aa18.07■□□□□ 0.48
NOD1-202ENST00000411552 PLA2G4BP0C869 781 aa18.07■□□□□ 0.48
NOD1-202ENST00000411552 FGFR1P11362 822 aa18.07■□□□□ 0.48
NOD1-202ENST00000411552 ATF7P17544 494 aaPredicted RBP18.07■□□□□ 0.48
NOD1-202ENST00000411552 PLCG1P19174 1290 aa18.07■□□□□ 0.48
NOD1-202ENST00000411552 SLC12A3P55017 1021 aa18.07■□□□□ 0.48
NOD1-202ENST00000411552 STK38Q15208 465 aa18.07■□□□□ 0.48
NOD1-202ENST00000411552 PCBP1Q15365 356 aaKnown RBP eCLIP18.07■□□□□ 0.48
NOD1-202ENST00000411552 EPC2Q52LR7 807 aa18.07■□□□□ 0.48
NOD1-202ENST00000411552 CDCA2Q69YH5 1023 aaPredicted RBP18.07■□□□□ 0.48
NOD1-202ENST00000411552 ZNF598Q86UK7 904 aaKnown RBP18.07■□□□□ 0.48
NOD1-202ENST00000411552 TMEM192Q8IY95 271 aa18.07■□□□□ 0.48
NOD1-202ENST00000411552 DAW1Q8N136 415 aa18.07■□□□□ 0.48
NOD1-202ENST00000411552 SYT2Q8N9I0 419 aaPredicted RBP18.07■□□□□ 0.48
NOD1-202ENST00000411552 KRI1Q8N9T8 703 aaKnown RBP18.07■□□□□ 0.48
NOD1-202ENST00000411552 RNF169Q8NCN4 708 aa18.07■□□□□ 0.48
NOD1-202ENST00000411552 LINC00301Q8NCQ3 95 aa18.07■□□□□ 0.48
NOD1-202ENST00000411552 RASSF8Q8NHQ8 419 aa18.07■□□□□ 0.48
NOD1-202ENST00000411552 CLP1Q92989 425 aaKnown RBP18.07■□□□□ 0.48
NOD1-202ENST00000411552 CCSER1Q9C0I3 900 aa18.07■□□□□ 0.48
NOD1-202ENST00000411552 RNF19AQ9NV58 838 aa18.07■□□□□ 0.48
NOD1-202ENST00000411552 MRPL42Q9Y6G3 142 aaKnown RBP18.07■□□□□ 0.48
NOD1-202ENST00000411552 PRRC2BQ5JSZ5 2229 aaKnown RBP18.07■□□□□ 0.48
NOD1-202ENST00000411552 TBKBP1A7MCY6 615 aa18.06■□□□□ 0.48
NOD1-202ENST00000411552 HIP1RO75146 1068 aa18.06■□□□□ 0.48
NOD1-202ENST00000411552 IGFBP4P22692 258 aa18.06■□□□□ 0.48
NOD1-202ENST00000411552 NAMPTP43490 491 aa18.06■□□□□ 0.48
NOD1-202ENST00000411552 PPP2R5AQ15172 486 aa18.06■□□□□ 0.48
NOD1-202ENST00000411552 AMHR2Q16671 573 aa18.06■□□□□ 0.48
NOD1-202ENST00000411552 FBXO22Q8NEZ5 403 aa18.06■□□□□ 0.48
NOD1-202ENST00000411552 GDPD5Q8WTR4 605 aa18.06■□□□□ 0.48
NOD1-202ENST00000411552 SYMPKQ92797 1274 aaKnown RBP18.06■□□□□ 0.48
NOD1-202ENST00000411552 IFT74Q96LB3 600 aa18.06■□□□□ 0.48
NOD1-202ENST00000411552 SAMD11Q96NU1 681 aa18.06■□□□□ 0.48
NOD1-202ENST00000411552 BLOC1S4Q9NUP1 217 aa18.06■□□□□ 0.48
NOD1-202ENST00000411552 FAM105AQ9NUU6 356 aa18.06■□□□□ 0.48
NOD1-202ENST00000411552 MYH11P35749 1972 aa18.06■□□□□ 0.48
NOD1-202ENST00000411552 SPTLC2O15270 562 aa18.05■□□□□ 0.48
NOD1-202ENST00000411552 B4GALT5O43286 388 aa18.05■□□□□ 0.48
NOD1-202ENST00000411552 LPXNO60711 386 aa18.05■□□□□ 0.48
NOD1-202ENST00000411552 YEATS4O95619 227 aa18.05■□□□□ 0.48
NOD1-202ENST00000411552 EOMESO95936 686 aa18.05■□□□□ 0.48
NOD1-202ENST00000411552 GUCY2CP25092 1073 aa18.05■□□□□ 0.48
NOD1-202ENST00000411552 RAB27AP51159 221 aa18.05■□□□□ 0.48
NOD1-202ENST00000411552 RAD51AP2Q09MP3 1159 aa18.05■□□□□ 0.48
NOD1-202ENST00000411552 MAPK7Q13164 816 aa18.05■□□□□ 0.48
NOD1-202ENST00000411552 CLLU1OSQ5K130 101 aa18.05■□□□□ 0.48
NOD1-202ENST00000411552 UBXN11Q5T124 520 aa18.05■□□□□ 0.48
NOD1-202ENST00000411552 ZBTB8OSQ8IWT0 167 aa18.05■□□□□ 0.48
NOD1-202ENST00000411552 MAFAQ8NHW3 353 aaPredicted RBP18.05■□□□□ 0.48
NOD1-202ENST00000411552 CPB2Q96IY4 423 aa18.05■□□□□ 0.48
NOD1-202ENST00000411552 KIFC3Q9BVG8 833 aa18.05■□□□□ 0.48
NOD1-202ENST00000411552 C2orf40Q9H1Z8 148 aa18.05■□□□□ 0.48
NOD1-202ENST00000411552 DAXXQ9UER7 740 aaPredicted RBP18.05■□□□□ 0.48
NOD1-202ENST00000411552 ZDHHC9Q9Y397 364 aa18.05■□□□□ 0.48
NOD1-202ENST00000411552 PCDHB2Q9Y5E7 798 aa18.05■□□□□ 0.48
NOD1-202ENST00000411552 HOXA2O43364 376 aa18.04■□□□□ 0.48
NOD1-202ENST00000411552 ZNF623O75123 536 aa18.04■□□□□ 0.48
NOD1-202ENST00000411552 BRD1O95696 1058 aa18.04■□□□□ 0.48
NOD1-202ENST00000411552 SKIP12755 728 aa18.04■□□□□ 0.48
NOD1-202ENST00000411552 ARF4P18085 180 aaPredicted RBP18.04■□□□□ 0.48
NOD1-202ENST00000411552 AXLP30530 894 aa18.04■□□□□ 0.48
NOD1-202ENST00000411552 CTNNB1P35222 781 aa18.04■□□□□ 0.48
NOD1-202ENST00000411552 BMPR1AP36894 532 aa18.04■□□□□ 0.48
NOD1-202ENST00000411552 ARSHQ5FYA8 562 aa18.04■□□□□ 0.48
NOD1-202ENST00000411552 NOTUMQ6P988 496 aa18.04■□□□□ 0.48
NOD1-202ENST00000411552 DEPTORQ8TB45 409 aa18.04■□□□□ 0.48
NOD1-202ENST00000411552 RAD54LQ92698 747 aa18.04■□□□□ 0.48
NOD1-202ENST00000411552 LPPQ93052 612 aa18.04■□□□□ 0.48
NOD1-202ENST00000411552 DRC1Q96MC2 740 aa18.04■□□□□ 0.48
NOD1-202ENST00000411552 CASD1Q96PB1 797 aa18.04■□□□□ 0.48
NOD1-202ENST00000411552 TIPINQ9BVW5 301 aa18.04■□□□□ 0.48
NOD1-202ENST00000411552 TMEM117Q9H0C3 514 aa18.04■□□□□ 0.48
NOD1-202ENST00000411552 CCDC113Q9H0I3 377 aa18.04■□□□□ 0.48
NOD1-202ENST00000411552 KCND2Q9NZV8 630 aa18.04■□□□□ 0.48
NOD1-202ENST00000411552 NPHP3-ACAD11A0A0J9YXS1 232 aa18.03■□□□□ 0.48
NOD1-202ENST00000411552 MEIS3P2A8K0S8 358 aa18.03■□□□□ 0.48
NOD1-202ENST00000411552 PPP6R2O75170 966 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms